RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 FAM196AQ6ZSG2 479 aa5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 ZAR1Q86SH2 424 aa5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 CCDC84Q86UT8 332 aaPredicted RBP5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 METTL16Q86W50 562 aaKnown RBP5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 NT5DC4Q86YG4 428 aa5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 ZNF507Q8TCN5 953 aa5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 DBNDD2Q9BQY9 259 aa5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 SPON2Q9BUD6 331 aa5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 WNT10AQ9GZT5 417 aa5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 UBP1Q9NZI7 540 aa5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 SUPT16HQ9Y5B9 1047 aaKnown RBP5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 C1orf167Q5SNV9 1468 aa5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 PIK3C2GO75747 1445 aa5.06□□□□□ -1.6
UBE2D3-226ENST00000508635 NALCNQ8IZF0 1738 aa5.06□□□□□ -1.6
UBE2D3-226ENST00000508635 LRP6O75581 1613 aa5.06□□□□□ -1.6
UBE2D3-226ENST00000508635 TGFB1P01137 390 aa5.06□□□□□ -1.6
UBE2D3-226ENST00000508635 PGRP06401 933 aa5.06□□□□□ -1.6
UBE2D3-226ENST00000508635 CRKP46108 304 aa5.06□□□□□ -1.6
UBE2D3-226ENST00000508635 NKG7Q16617 165 aa5.06□□□□□ -1.6
UBE2D3-226ENST00000508635 TMEM132EQ6IEE7 984 aa5.06□□□□□ -1.6
UBE2D3-226ENST00000508635 XAGE3Q8WTP9 111 aa5.06□□□□□ -1.6
UBE2D3-226ENST00000508635 C14orf93Q9H972 538 aaKnown RBP5.06□□□□□ -1.6
UBE2D3-226ENST00000508635 ATG3Q9NT62 314 aa5.06□□□□□ -1.6
UBE2D3-226ENST00000508635 NRXN1Q9ULB1 1477 aa5.06□□□□□ -1.6
UBE2D3-226ENST00000508635 IFT172Q9UG01 1749 aa5.06□□□□□ -1.6
UBE2D3-226ENST00000508635 TECPR2O15040 1411 aa5.06□□□□□ -1.6
UBE2D3-226ENST00000508635 LRPPRCP42704 1394 aaKnown RBP5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 ABCC11Q96J66 1382 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 E9PSI1 815 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 GREM1O60565 184 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 LEFTY1O75610 366 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 FAM87AP0C7U9 286 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 PLCG1P19174 1290 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 MPP2Q14168 576 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 SEZ6Q53EL9 994 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 ZNF765Q7L2R6 523 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 REC114Q7Z4M0 266 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 WAPLQ7Z5K2 1190 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 DTX1Q86Y01 620 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 ZDHHC13Q8IUH4 622 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 KIAA0825Q8IV33 1275 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 TOP6BLQ8N6T0 577 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 DDX17Q92841 729 aaKnown RBP5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 GATA6Q92908 595 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 LRRC59Q96AG4 307 aaKnown RBP5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 EAF1Q96JC9 268 aaPredicted RBP5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 ORAI2Q96SN7 254 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 DPH2Q9BQC3 489 aaPredicted RBP5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 OSBPL1AQ9BXW6 950 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 BRMS1Q9HCU9 246 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 STK26Q9P289 416 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 DDX41Q9UJV9 622 aaKnown RBP5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 POLR3KQ9Y2Y1 108 aaPredicted RBP5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 MYOM2P54296 1465 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 YTHDC2Q9H6S0 1430 aaKnown RBP5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 NHSL1Q5SYE7 1610 aa5.05□□□□□ -1.6
UBE2D3-226ENST00000508635 PLEKHH1Q9ULM0 1364 aa5.04□□□□□ -1.6
UBE2D3-226ENST00000508635 MCM4P33991 863 aa5.04□□□□□ -1.6
UBE2D3-226ENST00000508635 PDE4BQ07343 736 aa5.04□□□□□ -1.6
UBE2D3-226ENST00000508635 APOBRQ0VD83 1088 aa5.04□□□□□ -1.6
UBE2D3-226ENST00000508635 CWF19L2Q2TBE0 894 aaKnown RBP5.04□□□□□ -1.6
UBE2D3-226ENST00000508635 SPOCD1Q6ZMY3 1216 aa5.04□□□□□ -1.6
UBE2D3-226ENST00000508635 ARMCX6Q7L4S7 300 aa5.04□□□□□ -1.6
UBE2D3-226ENST00000508635 HID1Q8IV36 788 aa5.04□□□□□ -1.6
UBE2D3-226ENST00000508635 ZNF654Q8IZM8 581 aa5.04□□□□□ -1.6
UBE2D3-226ENST00000508635 KCT2Q8NC54 265 aa5.04□□□□□ -1.6
UBE2D3-226ENST00000508635 GIMAP7Q8NHV1 300 aa5.04□□□□□ -1.6
UBE2D3-226ENST00000508635 LRRC4CQ9HCJ2 640 aa5.04□□□□□ -1.6
UBE2D3-226ENST00000508635 KCNQ5Q9NR82 932 aa5.04□□□□□ -1.6
UBE2D3-226ENST00000508635 TJP2Q9UDY2 1190 aa5.04□□□□□ -1.6
UBE2D3-226ENST00000508635 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.04□□□□□ -1.6
UBE2D3-226ENST00000508635 SHPRHQ149N8 1683 aa5.04□□□□□ -1.6
UBE2D3-226ENST00000508635 CDC42BPGQ6DT37 1551 aa5.04□□□□□ -1.6
UBE2D3-226ENST00000508635 PNPLA6Q8IY17 1366 aa5.04□□□□□ -1.6
UBE2D3-226ENST00000508635 PRR19A6NJB7 356 aa5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 DBX1A6NMT0 343 aa5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 UPK3BL1B0FP48 263 aa5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 UPK3BL2E5RIL1 263 aa5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 RBAK-RBAKDNI3L0D1 243 aa5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 TCF3P15923 654 aa5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 SLBPQ14493 270 aaKnown RBP eCLIP5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 MEX3CQ5U5Q3 659 aaKnown RBP5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 PRAMEF13Q5VWM6 474 aa5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 DUSP27Q5VZP5 1158 aa5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 ZNF772Q68DY9 489 aaPredicted RBP5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 OGFOD3Q6PK18 319 aa5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 GK5Q6ZS86 529 aa5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 NKD1Q969G9 470 aa5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 ACSF2Q96CM8 615 aaPredicted RBP5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 DUSP23Q9BVJ7 150 aa5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 REV1Q9UBZ9 1251 aa5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 KLHL3Q9UH77 587 aa5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 LEMD3Q9Y2U8 911 aa5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 LAMC1P11047 1609 aa5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 DHX57Q6P158 1386 aaKnown RBP5.03□□□□□ -1.6
UBE2D3-226ENST00000508635 LRIG2O94898 1065 aa5.02□□□□□ -1.61
UBE2D3-226ENST00000508635 HTR3BO95264 441 aa5.02□□□□□ -1.61
UBE2D3-226ENST00000508635 ERCC5P28715 1186 aaPredicted RBP5.02□□□□□ -1.61
UBE2D3-226ENST00000508635 HOXA10P31260 410 aaPredicted RBP5.02□□□□□ -1.61
UBE2D3-226ENST00000508635 PAK2Q13177 524 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms