RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 FAM184BQ9ULE4 1060 aa21.59■■□□□ 1.05
CLDND1-217ENST00000508071 SYNGAP1Q96PV0 1343 aa21.58■■□□□ 1.05
CLDND1-217ENST00000508071 SYNRGQ9UMZ2 1314 aa21.58■■□□□ 1.05
CLDND1-217ENST00000508071 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.58■■□□□ 1.05
CLDND1-217ENST00000508071 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.58■■□□□ 1.05
CLDND1-217ENST00000508071 MOXD2PA6NHM9 499 aa21.58■■□□□ 1.05
CLDND1-217ENST00000508071 FAAP100Q0VG06 881 aa21.58■■□□□ 1.05
CLDND1-217ENST00000508071 SNRNP48Q6IEG0 339 aaKnown RBP21.58■■□□□ 1.05
CLDND1-217ENST00000508071 DDX11Q96FC9 970 aa21.58■■□□□ 1.05
CLDND1-217ENST00000508071 TEX13BQ9BXU2 312 aa21.58■■□□□ 1.05
CLDND1-217ENST00000508071 ZBED9Q6R2W3 1325 aa21.57■■□□□ 1.04
CLDND1-217ENST00000508071 CHGBP05060 677 aa21.57■■□□□ 1.04
CLDND1-217ENST00000508071 DNAJB2P25686 324 aa21.57■■□□□ 1.04
CLDND1-217ENST00000508071 ZSCAN25Q6NSZ9 544 aa21.57■■□□□ 1.04
CLDND1-217ENST00000508071 ARPP21Q9UBL0 812 aaPredicted RBP21.57■■□□□ 1.04
CLDND1-217ENST00000508071 ZHX1Q9UKY1 873 aaPredicted RBP21.57■■□□□ 1.04
CLDND1-217ENST00000508071 TIMP1P01033 207 aa21.56■■□□□ 1.04
CLDND1-217ENST00000508071 KCNA10Q16322 511 aa21.56■■□□□ 1.04
CLDND1-217ENST00000508071 SIRT2Q8IXJ6 389 aa21.56■■□□□ 1.04
CLDND1-217ENST00000508071 KLHDC9Q8NEP7 349 aa21.56■■□□□ 1.04
CLDND1-217ENST00000508071 NUP88Q99567 741 aaPredicted RBP21.56■■□□□ 1.04
CLDND1-217ENST00000508071 MROH7Q68CQ1 1323 aa21.55■■□□□ 1.04
CLDND1-217ENST00000508071 GREB1LQ9C091 1923 aaPredicted RBP21.55■■□□□ 1.04
CLDND1-217ENST00000508071 DUSP11O75319 330 aaKnown RBP21.55■■□□□ 1.04
CLDND1-217ENST00000508071 SNAI1O95863 264 aaPredicted RBP21.55■■□□□ 1.04
CLDND1-217ENST00000508071 SLC4A3P48751 1232 aa21.55■■□□□ 1.04
CLDND1-217ENST00000508071 GRIN2CQ14957 1233 aa21.55■■□□□ 1.04
CLDND1-217ENST00000508071 MAMDC4Q6UXC1 1216 aa21.55■■□□□ 1.04
CLDND1-217ENST00000508071 GLT1D1Q96MS3 346 aa21.55■■□□□ 1.04
CLDND1-217ENST00000508071 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.55■■□□□ 1.04
CLDND1-217ENST00000508071 PUS7LQ9H0K6 701 aaKnown RBP21.55■■□□□ 1.04
CLDND1-217ENST00000508071 PRDM6Q9NQX0 595 aa21.55■■□□□ 1.04
CLDND1-217ENST00000508071 CTDP1Q9Y5B0 961 aaPredicted RBP21.55■■□□□ 1.04
CLDND1-217ENST00000508071 ZBED4O75132 1171 aa21.54■■□□□ 1.04
CLDND1-217ENST00000508071 CCDC174Q6PII3 467 aa21.54■■□□□ 1.04
CLDND1-217ENST00000508071 PRPF38AQ8NAV1 312 aaKnown RBP21.54■■□□□ 1.04
CLDND1-217ENST00000508071 PCSK9Q8NBP7 692 aaKnown RBP21.54■■□□□ 1.04
CLDND1-217ENST00000508071 ZNF576Q9H609 170 aa21.54■■□□□ 1.04
CLDND1-217ENST00000508071 MKNK2Q9HBH9 465 aa21.54■■□□□ 1.04
CLDND1-217ENST00000508071 DDX19BQ9UMR2 479 aa21.54■■□□□ 1.04
CLDND1-217ENST00000508071 RIPK3Q9Y572 518 aa21.54■■□□□ 1.04
CLDND1-217ENST00000508071 MCM3APO60318 1980 aa21.54■■□□□ 1.04
CLDND1-217ENST00000508071 ELP1O95163 1332 aa21.54■■□□□ 1.04
CLDND1-217ENST00000508071 MYO9BQ13459 2157 aa21.53■■□□□ 1.04
CLDND1-217ENST00000508071 DNAJC25-GNG10A0A024R161 153 aa21.53■■□□□ 1.04
CLDND1-217ENST00000508071 F5H6K3 240 aa21.53■■□□□ 1.04
CLDND1-217ENST00000508071 NDUFB10O96000 172 aa21.53■■□□□ 1.04
CLDND1-217ENST00000508071 KLRC3Q07444 240 aa21.53■■□□□ 1.04
CLDND1-217ENST00000508071 PPIGQ13427 754 aaKnown RBP eCLIP21.53■■□□□ 1.04
CLDND1-217ENST00000508071 CCSAPQ6IQ19 270 aaPredicted RBP21.53■■□□□ 1.04
CLDND1-217ENST00000508071 ZNF467Q7Z7K2 595 aaPredicted RBP21.53■■□□□ 1.04
CLDND1-217ENST00000508071 CPXCR1Q8N123 301 aa21.53■■□□□ 1.04
CLDND1-217ENST00000508071 VTI1AQ96AJ9 217 aa21.53■■□□□ 1.04
CLDND1-217ENST00000508071 TIFAQ96CG3 184 aa21.53■■□□□ 1.04
CLDND1-217ENST00000508071 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.53■■□□□ 1.04
CLDND1-217ENST00000508071 SPC25Q9HBM1 224 aa21.53■■□□□ 1.04
CLDND1-217ENST00000508071 ZBTB40Q9NUA8 1239 aa21.53■■□□□ 1.04
CLDND1-217ENST00000508071 NYAP2Q9P242 653 aa21.53■■□□□ 1.04
CLDND1-217ENST00000508071 TBX21Q9UL17 535 aa21.53■■□□□ 1.04
CLDND1-217ENST00000508071 MYH4Q9Y623 1939 aa21.53■■□□□ 1.04
CLDND1-217ENST00000508071 MYADML2A6NDP7 307 aa21.52■■□□□ 1.04
CLDND1-217ENST00000508071 C6orf222P0C671 652 aaPredicted RBP21.52■■□□□ 1.04
CLDND1-217ENST00000508071 RASA1P20936 1047 aa21.52■■□□□ 1.04
CLDND1-217ENST00000508071 CST5P28325 142 aaPredicted RBP21.52■■□□□ 1.04
CLDND1-217ENST00000508071 ACVR2BQ13705 512 aa21.52■■□□□ 1.04
CLDND1-217ENST00000508071 SBK1Q52WX2 424 aa21.52■■□□□ 1.04
CLDND1-217ENST00000508071 MFSD5Q6N075 450 aa21.52■■□□□ 1.04
CLDND1-217ENST00000508071 STK11IPQ8N1F8 1099 aa21.52■■□□□ 1.04
CLDND1-217ENST00000508071 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.52■■□□□ 1.04
CLDND1-217ENST00000508071 ATP2A1O14983 1001 aa21.51■■□□□ 1.03
CLDND1-217ENST00000508071 ASGR1P07306 291 aa21.51■■□□□ 1.03
CLDND1-217ENST00000508071 TJAP1Q5JTD0 557 aa21.51■■□□□ 1.03
CLDND1-217ENST00000508071 ANKRD35Q8N283 1001 aa21.51■■□□□ 1.03
CLDND1-217ENST00000508071 STRBPQ96SI9 672 aaKnown RBP21.51■■□□□ 1.03
CLDND1-217ENST00000508071 ABHD16BQ9H3Z7 469 aa21.51■■□□□ 1.03
CLDND1-217ENST00000508071 COG6Q9Y2V7 657 aa21.51■■□□□ 1.03
CLDND1-217ENST00000508071 A0A0U1RQG5 324 aaPredicted RBP21.5■■□□□ 1.03
CLDND1-217ENST00000508071 MINDY4BA8MYZ0 360 aa21.5■■□□□ 1.03
CLDND1-217ENST00000508071 CCDC129Q6ZRS4 1044 aa21.5■■□□□ 1.03
CLDND1-217ENST00000508071 TMEM199Q8N511 208 aa21.5■■□□□ 1.03
CLDND1-217ENST00000508071 USP38Q8NB14 1042 aa21.5■■□□□ 1.03
CLDND1-217ENST00000508071 KIFC2Q96AC6 838 aa21.5■■□□□ 1.03
CLDND1-217ENST00000508071 RAVER2Q9HCJ3 691 aaKnown RBP21.5■■□□□ 1.03
CLDND1-217ENST00000508071 CLIP2Q9UDT6 1046 aa21.5■■□□□ 1.03
CLDND1-217ENST00000508071 FBXO40Q9UH90 709 aa21.5■■□□□ 1.03
CLDND1-217ENST00000508071 ARVCFO00192 962 aa21.49■■□□□ 1.03
CLDND1-217ENST00000508071 CDK7P50613 346 aa21.49■■□□□ 1.03
CLDND1-217ENST00000508071 CCDC144BQ3MJ40 725 aa21.49■■□□□ 1.03
CLDND1-217ENST00000508071 TMEM240Q5SV17 173 aa21.49■■□□□ 1.03
CLDND1-217ENST00000508071 GIMAP6Q6P9H5 292 aa21.49■■□□□ 1.03
CLDND1-217ENST00000508071 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.49■■□□□ 1.03
CLDND1-217ENST00000508071 GAS2L1Q99501 681 aaPredicted RBP21.49■■□□□ 1.03
CLDND1-217ENST00000508071 UPF3AQ9H1J1 476 aaKnown RBP21.49■■□□□ 1.03
CLDND1-217ENST00000508071 CHMP4BQ9H444 224 aaKnown RBP21.49■■□□□ 1.03
CLDND1-217ENST00000508071 SLC38A10Q9HBR0 1119 aa21.49■■□□□ 1.03
CLDND1-217ENST00000508071 TLR3O15455 904 aaKnown RBP21.48■■□□□ 1.03
CLDND1-217ENST00000508071 GJA9P57773 515 aa21.48■■□□□ 1.03
CLDND1-217ENST00000508071 IRX5P78411 483 aaPredicted RBP21.48■■□□□ 1.03
CLDND1-217ENST00000508071 GNASQ5JWF2 1037 aa21.48■■□□□ 1.03
CLDND1-217ENST00000508071 ARMCX2Q7L311 632 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 185.2 ms