RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 CDH23Q9H251 3354 aa16.62■□□□□ 0.25
TSPAN17-206ENST00000507471 SNAI1O95863 264 aaPredicted RBP16.61■□□□□ 0.25
TSPAN17-206ENST00000507471 MS4A1P11836 297 aa16.61■□□□□ 0.25
TSPAN17-206ENST00000507471 SNRNP48Q6IEG0 339 aaKnown RBP16.61■□□□□ 0.25
TSPAN17-206ENST00000507471 MSL3Q8N5Y2 521 aaKnown RBP16.61■□□□□ 0.25
TSPAN17-206ENST00000507471 NUP133Q8WUM0 1156 aa16.61■□□□□ 0.25
TSPAN17-206ENST00000507471 TOX2Q96NM4 488 aa16.61■□□□□ 0.25
TSPAN17-206ENST00000507471 SLF1Q9BQI6 1058 aa16.61■□□□□ 0.25
TSPAN17-206ENST00000507471 TEX13BQ9BXU2 312 aa16.61■□□□□ 0.25
TSPAN17-206ENST00000507471 RIPK3Q9Y572 518 aa16.61■□□□□ 0.25
TSPAN17-206ENST00000507471 SYNGAP1Q96PV0 1343 aa16.61■□□□□ 0.25
TSPAN17-206ENST00000507471 DNAJC25-GNG10A0A024R161 153 aa16.6■□□□□ 0.25
TSPAN17-206ENST00000507471 MOXD2PA6NHM9 499 aa16.6■□□□□ 0.25
TSPAN17-206ENST00000507471 RASA1P20936 1047 aa16.6■□□□□ 0.25
TSPAN17-206ENST00000507471 CCSAPQ6IQ19 270 aaPredicted RBP16.6■□□□□ 0.25
TSPAN17-206ENST00000507471 ZSCAN25Q6NSZ9 544 aa16.6■□□□□ 0.25
TSPAN17-206ENST00000507471 MAMDC4Q6UXC1 1216 aa16.6■□□□□ 0.25
TSPAN17-206ENST00000507471 KLHDC9Q8NEP7 349 aa16.6■□□□□ 0.25
TSPAN17-206ENST00000507471 DDX11Q96FC9 970 aa16.6■□□□□ 0.25
TSPAN17-206ENST00000507471 NYAP2Q9P242 653 aa16.6■□□□□ 0.25
TSPAN17-206ENST00000507471 FAM184BQ9ULE4 1060 aa16.6■□□□□ 0.25
TSPAN17-206ENST00000507471 MYADML2A6NDP7 307 aa16.59■□□□□ 0.25
TSPAN17-206ENST00000507471 DCDC2CA8MYV0 355 aa16.59■□□□□ 0.25
TSPAN17-206ENST00000507471 F5H6K3 240 aa16.59■□□□□ 0.25
TSPAN17-206ENST00000507471 NDUFB10O96000 172 aa16.59■□□□□ 0.25
TSPAN17-206ENST00000507471 DNAJB2P25686 324 aa16.59■□□□□ 0.25
TSPAN17-206ENST00000507471 IRX5P78411 483 aaPredicted RBP16.59■□□□□ 0.25
TSPAN17-206ENST00000507471 KLRC3Q07444 240 aa16.59■□□□□ 0.25
TSPAN17-206ENST00000507471 KCNA10Q16322 511 aa16.59■□□□□ 0.25
TSPAN17-206ENST00000507471 SBK1Q52WX2 424 aa16.59■□□□□ 0.25
TSPAN17-206ENST00000507471 STK11IPQ8N1F8 1099 aa16.59■□□□□ 0.25
TSPAN17-206ENST00000507471 STRBPQ96SI9 672 aaKnown RBP16.59■□□□□ 0.25
TSPAN17-206ENST00000507471 ZHX1Q9UKY1 873 aaPredicted RBP16.59■□□□□ 0.25
TSPAN17-206ENST00000507471 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.58■□□□□ 0.24
TSPAN17-206ENST00000507471 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.58■□□□□ 0.24
TSPAN17-206ENST00000507471 GSG1L2A8MUP6 293 aa16.58■□□□□ 0.24
TSPAN17-206ENST00000507471 ATP2A1O14983 1001 aa16.58■□□□□ 0.24
TSPAN17-206ENST00000507471 ADCY6O43306 1168 aa16.58■□□□□ 0.24
TSPAN17-206ENST00000507471 GRIN2CQ14957 1233 aa16.58■□□□□ 0.24
TSPAN17-206ENST00000507471 ZNF467Q7Z7K2 595 aaPredicted RBP16.58■□□□□ 0.24
TSPAN17-206ENST00000507471 CPXCR1Q8N123 301 aa16.58■□□□□ 0.24
TSPAN17-206ENST00000507471 PRPF38AQ8NAV1 312 aaKnown RBP16.58■□□□□ 0.24
TSPAN17-206ENST00000507471 MKNK2Q9HBH9 465 aa16.58■□□□□ 0.24
TSPAN17-206ENST00000507471 TBX21Q9UL17 535 aa16.58■□□□□ 0.24
TSPAN17-206ENST00000507471 VCANP13611 3396 aa16.58■□□□□ 0.24
TSPAN17-206ENST00000507471 CUL9Q8IWT3 2517 aa16.57■□□□□ 0.24
TSPAN17-206ENST00000507471 DUSP11O75319 330 aaKnown RBP16.57■□□□□ 0.24
TSPAN17-206ENST00000507471 TIMP1P01033 207 aa16.57■□□□□ 0.24
TSPAN17-206ENST00000507471 CST5P28325 142 aaPredicted RBP16.57■□□□□ 0.24
TSPAN17-206ENST00000507471 SLC4A3P48751 1232 aa16.57■□□□□ 0.24
TSPAN17-206ENST00000507471 ACVR2BQ13705 512 aa16.57■□□□□ 0.24
TSPAN17-206ENST00000507471 FGD4Q96M96 766 aa16.57■□□□□ 0.24
TSPAN17-206ENST00000507471 GLT1D1Q96MS3 346 aa16.57■□□□□ 0.24
TSPAN17-206ENST00000507471 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.57■□□□□ 0.24
TSPAN17-206ENST00000507471 LRRCC1Q9C099 1032 aa16.57■□□□□ 0.24
TSPAN17-206ENST00000507471 CLIP2Q9UDT6 1046 aa16.57■□□□□ 0.24
TSPAN17-206ENST00000507471 MYH4Q9Y623 1939 aa16.57■□□□□ 0.24
TSPAN17-206ENST00000507471 ELP1O95163 1332 aa16.56■□□□□ 0.24
TSPAN17-206ENST00000507471 MROH7Q68CQ1 1323 aa16.56■□□□□ 0.24
TSPAN17-206ENST00000507471 IGKV6D-41A0A0C4DH26 115 aa16.56■□□□□ 0.24
TSPAN17-206ENST00000507471 MINDY4BA8MYZ0 360 aa16.56■□□□□ 0.24
TSPAN17-206ENST00000507471 SMARCA5O60264 1052 aaPredicted RBP16.56■□□□□ 0.24
TSPAN17-206ENST00000507471 ASGR1P07306 291 aa16.56■□□□□ 0.24
TSPAN17-206ENST00000507471 C6orf222P0C671 652 aaPredicted RBP16.56■□□□□ 0.24
TSPAN17-206ENST00000507471 CDK7P50613 346 aa16.56■□□□□ 0.24
TSPAN17-206ENST00000507471 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.56■□□□□ 0.24
TSPAN17-206ENST00000507471 KIFC2Q96AC6 838 aa16.56■□□□□ 0.24
TSPAN17-206ENST00000507471 RAVER2Q9HCJ3 691 aaKnown RBP16.56■□□□□ 0.24
TSPAN17-206ENST00000507471 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.56■□□□□ 0.24
TSPAN17-206ENST00000507471 SPTBN5Q9NRC6 3674 aaKnown RBP16.56■□□□□ 0.24
TSPAN17-206ENST00000507471 ZBED4O75132 1171 aa16.55■□□□□ 0.24
TSPAN17-206ENST00000507471 CCDC144BQ3MJ40 725 aa16.55■□□□□ 0.24
TSPAN17-206ENST00000507471 MFSD5Q6N075 450 aa16.55■□□□□ 0.24
TSPAN17-206ENST00000507471 GIMAP6Q6P9H5 292 aa16.55■□□□□ 0.24
TSPAN17-206ENST00000507471 MIER1Q8N108 512 aa16.55■□□□□ 0.24
TSPAN17-206ENST00000507471 ANKRD35Q8N283 1001 aa16.55■□□□□ 0.24
TSPAN17-206ENST00000507471 USP38Q8NB14 1042 aa16.55■□□□□ 0.24
TSPAN17-206ENST00000507471 PCSK9Q8NBP7 692 aaKnown RBP16.55■□□□□ 0.24
TSPAN17-206ENST00000507471 OSBP2Q969R2 916 aa16.55■□□□□ 0.24
TSPAN17-206ENST00000507471 UPF3AQ9H1J1 476 aaKnown RBP16.55■□□□□ 0.24
TSPAN17-206ENST00000507471 ABHD16BQ9H3Z7 469 aa16.55■□□□□ 0.24
TSPAN17-206ENST00000507471 ZNF576Q9H609 170 aa16.55■□□□□ 0.24
TSPAN17-206ENST00000507471 SLC38A10Q9HBR0 1119 aa16.55■□□□□ 0.24
TSPAN17-206ENST00000507471 EPB41L4AQ9HCS5 686 aaPredicted RBP16.55■□□□□ 0.24
TSPAN17-206ENST00000507471 GJA9P57773 515 aa16.54■□□□□ 0.24
TSPAN17-206ENST00000507471 TMEM240Q5SV17 173 aa16.54■□□□□ 0.24
TSPAN17-206ENST00000507471 C16orf59Q7L2K0 433 aa16.54■□□□□ 0.24
TSPAN17-206ENST00000507471 KBTBD3Q8NAB2 608 aa16.54■□□□□ 0.24
TSPAN17-206ENST00000507471 APPBP2Q92624 585 aa16.54■□□□□ 0.24
TSPAN17-206ENST00000507471 SYMPKQ92797 1274 aaKnown RBP16.54■□□□□ 0.24
TSPAN17-206ENST00000507471 TIFAQ96CG3 184 aa16.54■□□□□ 0.24
TSPAN17-206ENST00000507471 CEP95Q96GE4 821 aa16.54■□□□□ 0.24
TSPAN17-206ENST00000507471 ECHDC1Q9NTX5 307 aa16.54■□□□□ 0.24
TSPAN17-206ENST00000507471 CTDP1Q9Y5B0 961 aaPredicted RBP16.54■□□□□ 0.24
TSPAN17-206ENST00000507471 A0A0U1RQG5 324 aaPredicted RBP16.53■□□□□ 0.24
TSPAN17-206ENST00000507471 ARVCFO00192 962 aa16.53■□□□□ 0.24
TSPAN17-206ENST00000507471 PRDM1O75626 825 aa16.53■□□□□ 0.24
TSPAN17-206ENST00000507471 CSF2RAP15509 400 aa16.53■□□□□ 0.24
TSPAN17-206ENST00000507471 PPIGQ13427 754 aaKnown RBP eCLIP16.53■□□□□ 0.24
TSPAN17-206ENST00000507471 ARMCX2Q7L311 632 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms