RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 GRIN2CQ14957 1233 aa11.16□□□□□ -0.62
PTPN20-216ENST00000506080 C1orf53Q5VUE5 145 aa11.16□□□□□ -0.62
PTPN20-216ENST00000506080 SPICE1Q8N0Z3 855 aa11.16□□□□□ -0.62
PTPN20-216ENST00000506080 USP38Q8NB14 1042 aa11.16□□□□□ -0.62
PTPN20-216ENST00000506080 SPRYD3Q8NCJ5 442 aa11.16□□□□□ -0.62
PTPN20-216ENST00000506080 ATG4CQ96DT6 458 aa11.16□□□□□ -0.62
PTPN20-216ENST00000506080 XPNPEP3Q9NQH7 507 aa11.16□□□□□ -0.62
PTPN20-216ENST00000506080 MCM9Q9NXL9 1143 aa11.16□□□□□ -0.62
PTPN20-216ENST00000506080 PCDHGA10Q9Y5H3 936 aa11.16□□□□□ -0.62
PTPN20-216ENST00000506080 TACC3Q9Y6A5 838 aa11.16□□□□□ -0.62
PTPN20-216ENST00000506080 MAGEB6P1A0A0J9YX57 407 aa11.15□□□□□ -0.62
PTPN20-216ENST00000506080 PQBP1O60828 265 aaKnown RBP11.15□□□□□ -0.62
PTPN20-216ENST00000506080 FLOT1O75955 427 aa11.15□□□□□ -0.62
PTPN20-216ENST00000506080 RARBP10826 455 aa11.15□□□□□ -0.62
PTPN20-216ENST00000506080 CLEC10AQ8IUN9 316 aa11.15□□□□□ -0.62
PTPN20-216ENST00000506080 MB21D1Q8N884 522 aa11.15□□□□□ -0.62
PTPN20-216ENST00000506080 SLC44A5Q8NCS7 719 aa11.15□□□□□ -0.62
PTPN20-216ENST00000506080 KCTD12Q96CX2 325 aaKnown RBP11.15□□□□□ -0.62
PTPN20-216ENST00000506080 RIOK1Q9BRS2 568 aaKnown RBP11.15□□□□□ -0.62
PTPN20-216ENST00000506080 MROH8Q9H579 483 aa11.15□□□□□ -0.62
PTPN20-216ENST00000506080 HCSTQ9UBK5 93 aa11.15□□□□□ -0.62
PTPN20-216ENST00000506080 PHF24Q9UPV7 400 aa11.15□□□□□ -0.62
PTPN20-216ENST00000506080 CDH23Q9H251 3354 aa11.14□□□□□ -0.63
PTPN20-216ENST00000506080 TMEM265A0A087WTH1 108 aa11.14□□□□□ -0.63
PTPN20-216ENST00000506080 A0A1W2PQ45 241 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-216ENST00000506080 A0A1W2PQY0 241 aa11.14□□□□□ -0.63
PTPN20-216ENST00000506080 PGK2P07205 417 aa11.14□□□□□ -0.63
PTPN20-216ENST00000506080 CYP2D6P10635 497 aa11.14□□□□□ -0.63
PTPN20-216ENST00000506080 FCER1AP12319 257 aa11.14□□□□□ -0.63
PTPN20-216ENST00000506080 TAL1P17542 331 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-216ENST00000506080 FPGSQ05932 587 aa11.14□□□□□ -0.63
PTPN20-216ENST00000506080 RNF180Q86T96 592 aa11.14□□□□□ -0.63
PTPN20-216ENST00000506080 ABRAQ8N0Z2 381 aa11.14□□□□□ -0.63
PTPN20-216ENST00000506080 LENG1Q96BZ8 264 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-216ENST00000506080 TMEM39AQ9NV64 488 aa11.14□□□□□ -0.63
PTPN20-216ENST00000506080 A0A0G2JMZ2 1700 aa11.14□□□□□ -0.63
PTPN20-216ENST00000506080 DPYSL4O14531 572 aa11.13□□□□□ -0.63
PTPN20-216ENST00000506080 KIAA0355O15063 1070 aa11.13□□□□□ -0.63
PTPN20-216ENST00000506080 COL9A1P20849 921 aa11.13□□□□□ -0.63
PTPN20-216ENST00000506080 DNAJB2P25686 324 aa11.13□□□□□ -0.63
PTPN20-216ENST00000506080 TMEM132BQ14DG7 1078 aa11.13□□□□□ -0.63
PTPN20-216ENST00000506080 TJAP1Q5JTD0 557 aa11.13□□□□□ -0.63
PTPN20-216ENST00000506080 TMEM179Q6ZVK1 233 aa11.13□□□□□ -0.63
PTPN20-216ENST00000506080 SDR42E1Q8WUS8 393 aa11.13□□□□□ -0.63
PTPN20-216ENST00000506080 PPM1EQ8WY54 764 aa11.13□□□□□ -0.63
PTPN20-216ENST00000506080 DYNLL2Q96FJ2 89 aa11.13□□□□□ -0.63
PTPN20-216ENST00000506080 MMP19Q99542 508 aa11.13□□□□□ -0.63
PTPN20-216ENST00000506080 ZBED2Q9BTP6 218 aa11.13□□□□□ -0.63
PTPN20-216ENST00000506080 CRNKL1Q9BZJ0 848 aaKnown RBP11.13□□□□□ -0.63
PTPN20-216ENST00000506080 ARHGEF10LQ9HCE6 1279 aa11.13□□□□□ -0.63
PTPN20-216ENST00000506080 NOP58Q9Y2X3 529 aaKnown RBP11.13□□□□□ -0.63
PTPN20-216ENST00000506080 NAV1Q8NEY1 1877 aa11.13□□□□□ -0.63
PTPN20-216ENST00000506080 SMCHD1A6NHR9 2005 aa11.13□□□□□ -0.63
PTPN20-216ENST00000506080 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.12□□□□□ -0.63
PTPN20-216ENST00000506080 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.12□□□□□ -0.63
PTPN20-216ENST00000506080 SLC25A27O95847 323 aa11.12□□□□□ -0.63
PTPN20-216ENST00000506080 AKR1B1P15121 316 aa11.12□□□□□ -0.63
PTPN20-216ENST00000506080 ICA1Q05084 483 aa11.12□□□□□ -0.63
PTPN20-216ENST00000506080 FAAP100Q0VG06 881 aa11.12□□□□□ -0.63
PTPN20-216ENST00000506080 ZKSCAN2Q63HK3 967 aa11.12□□□□□ -0.63
PTPN20-216ENST00000506080 SIAH1Q8IUQ4 282 aa11.12□□□□□ -0.63
PTPN20-216ENST00000506080 TIFAQ96CG3 184 aa11.12□□□□□ -0.63
PTPN20-216ENST00000506080 TINF2Q9BSI4 451 aa11.12□□□□□ -0.63
PTPN20-216ENST00000506080 SLC4A5Q9BY07 1137 aa11.12□□□□□ -0.63
PTPN20-216ENST00000506080 ZNF576Q9H609 170 aa11.12□□□□□ -0.63
PTPN20-216ENST00000506080 VCPKMTQ9H867 229 aa11.12□□□□□ -0.63
PTPN20-216ENST00000506080 RAPGEFL1Q9UHV5 662 aa11.12□□□□□ -0.63
PTPN20-216ENST00000506080 TNFRSF10AO00220 468 aa11.11□□□□□ -0.63
PTPN20-216ENST00000506080 ZNF865P0CJ78 1059 aaPredicted RBP11.11□□□□□ -0.63
PTPN20-216ENST00000506080 AKR1A1P14550 325 aa11.11□□□□□ -0.63
PTPN20-216ENST00000506080 PDE6AP16499 860 aa11.11□□□□□ -0.63
PTPN20-216ENST00000506080 KCTD2Q14681 263 aa11.11□□□□□ -0.63
PTPN20-216ENST00000506080 SLC9C2Q5TAH2 1124 aa11.11□□□□□ -0.63
PTPN20-216ENST00000506080 AACSQ86V21 672 aa11.11□□□□□ -0.63
PTPN20-216ENST00000506080 LCORLQ8N3X6 602 aa11.11□□□□□ -0.63
PTPN20-216ENST00000506080 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.11□□□□□ -0.63
PTPN20-216ENST00000506080 DCP1AQ9NPI6 582 aaPredicted RBP11.11□□□□□ -0.63
PTPN20-216ENST00000506080 STARD7Q9NQZ5 370 aa11.11□□□□□ -0.63
PTPN20-216ENST00000506080 FBXO28Q9NVF7 368 aa11.11□□□□□ -0.63
PTPN20-216ENST00000506080 NRBP1Q9UHY1 535 aa11.11□□□□□ -0.63
PTPN20-216ENST00000506080 EXOC6BQ9Y2D4 811 aa11.11□□□□□ -0.63
PTPN20-216ENST00000506080 TMX2Q9Y320 296 aa11.11□□□□□ -0.63
PTPN20-216ENST00000506080 ZNFX1Q9P2E3 1918 aaKnown RBP11.11□□□□□ -0.63
PTPN20-216ENST00000506080 ZNF532Q9HCE3 1301 aa11.11□□□□□ -0.63
PTPN20-216ENST00000506080 DCDC2CA8MYV0 355 aa11.1□□□□□ -0.63
PTPN20-216ENST00000506080 BHMG1C9JSJ3 638 aaPredicted RBP11.1□□□□□ -0.63
PTPN20-216ENST00000506080 SMIM22K7EJ46 135 aa11.1□□□□□ -0.63
PTPN20-216ENST00000506080 WDR46O15213 610 aaKnown RBP11.1□□□□□ -0.63
PTPN20-216ENST00000506080 RAD21O60216 631 aa11.1□□□□□ -0.63
PTPN20-216ENST00000506080 ADAMTS4O75173 837 aa11.1□□□□□ -0.63
PTPN20-216ENST00000506080 ACLYP53396 1101 aa11.1□□□□□ -0.63
PTPN20-216ENST00000506080 ZNF792Q3KQV3 632 aa11.1□□□□□ -0.63
PTPN20-216ENST00000506080 TMED8Q6PL24 325 aaPredicted RBP11.1□□□□□ -0.63
PTPN20-216ENST00000506080 CCDC129Q6ZRS4 1044 aa11.1□□□□□ -0.63
PTPN20-216ENST00000506080 SH2D4AQ9H788 454 aa11.1□□□□□ -0.63
PTPN20-216ENST00000506080 IL1RAPL2Q9NP60 686 aa11.1□□□□□ -0.63
PTPN20-216ENST00000506080 SWAP70Q9UH65 585 aa11.1□□□□□ -0.63
PTPN20-216ENST00000506080 GRXCR1A8MXD5 290 aa11.09□□□□□ -0.63
PTPN20-216ENST00000506080 PRKAB2O43741 272 aa11.09□□□□□ -0.63
PTPN20-216ENST00000506080 TIMP1P01033 207 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms