RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 MAP6Q96JE9 813 aa5.72□□□□□ -1.49
HMGB1P29-201ENST00000505659 HHIPL1Q96JK4 782 aa5.72□□□□□ -1.49
HMGB1P29-201ENST00000505659 GPR160Q9UJ42 338 aa5.72□□□□□ -1.49
HMGB1P29-201ENST00000505659 ZNF214Q9UL59 606 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P29-201ENST00000505659 ZNF451Q9Y4E5 1061 aa5.72□□□□□ -1.49
HMGB1P29-201ENST00000505659 FITM1A5D6W6 292 aa5.71□□□□□ -1.5
HMGB1P29-201ENST00000505659 H0Y8X5 98 aa5.71□□□□□ -1.5
HMGB1P29-201ENST00000505659 CBFA2T2O43439 604 aa5.71□□□□□ -1.5
HMGB1P29-201ENST00000505659 FARP2O94887 1054 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P29-201ENST00000505659 TCF3P15923 654 aa5.71□□□□□ -1.5
HMGB1P29-201ENST00000505659 CEBPAP49715 358 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P29-201ENST00000505659 ZNF445P59923 1031 aa5.71□□□□□ -1.5
HMGB1P29-201ENST00000505659 DUSP4Q13115 394 aa5.71□□□□□ -1.5
HMGB1P29-201ENST00000505659 KIR3DS1Q14943 382 aa5.71□□□□□ -1.5
HMGB1P29-201ENST00000505659 SIRT2Q8IXJ6 389 aa5.71□□□□□ -1.5
HMGB1P29-201ENST00000505659 OXR1Q8N573 874 aa5.71□□□□□ -1.5
HMGB1P29-201ENST00000505659 SYTL4Q96C24 671 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P29-201ENST00000505659 SHISA4Q96DD7 197 aa5.71□□□□□ -1.5
HMGB1P29-201ENST00000505659 SPATA32Q96LK8 384 aa5.71□□□□□ -1.5
HMGB1P29-201ENST00000505659 DSCC1Q9BVC3 393 aa5.71□□□□□ -1.5
HMGB1P29-201ENST00000505659 GP6Q9HCN6 339 aa5.71□□□□□ -1.5
HMGB1P29-201ENST00000505659 AP5S1Q9NUS5 200 aa5.71□□□□□ -1.5
HMGB1P29-201ENST00000505659 PODXL2Q9NZ53 605 aa5.71□□□□□ -1.5
HMGB1P29-201ENST00000505659 ZNF205O95201 554 aa5.7□□□□□ -1.5
HMGB1P29-201ENST00000505659 VAV1P15498 845 aa5.7□□□□□ -1.5
HMGB1P29-201ENST00000505659 BMP8BP34820 402 aa5.7□□□□□ -1.5
HMGB1P29-201ENST00000505659 NR0B2Q15466 257 aa5.7□□□□□ -1.5
HMGB1P29-201ENST00000505659 PPP2R5EQ16537 467 aa5.7□□□□□ -1.5
HMGB1P29-201ENST00000505659 RTP2Q5QGT7 225 aa5.7□□□□□ -1.5
HMGB1P29-201ENST00000505659 CEP128Q6ZU80 1094 aa5.7□□□□□ -1.5
HMGB1P29-201ENST00000505659 ANKS4BQ8N8V4 417 aa5.7□□□□□ -1.5
HMGB1P29-201ENST00000505659 CPLX3Q8WVH0 158 aa5.7□□□□□ -1.5
HMGB1P29-201ENST00000505659 ANAPC16Q96DE5 110 aa5.7□□□□□ -1.5
HMGB1P29-201ENST00000505659 PLCD4Q9BRC7 762 aa5.7□□□□□ -1.5
HMGB1P29-201ENST00000505659 CDADC1Q9BWV3 514 aa5.7□□□□□ -1.5
HMGB1P29-201ENST00000505659 ERVK13-1Q9NX77 482 aa5.7□□□□□ -1.5
HMGB1P29-201ENST00000505659 FAM53CQ9NYF3 392 aa5.7□□□□□ -1.5
HMGB1P29-201ENST00000505659 GPR55Q9Y2T6 319 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P29-201ENST00000505659 ATF4P18848 351 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P29-201ENST00000505659 CD247P20963 164 aa5.69□□□□□ -1.5
HMGB1P29-201ENST00000505659 CHRNEQ04844 493 aa5.69□□□□□ -1.5
HMGB1P29-201ENST00000505659 GNPTABQ3T906 1256 aa5.69□□□□□ -1.5
HMGB1P29-201ENST00000505659 NOL9Q5SY16 702 aaKnown RBP5.69□□□□□ -1.5
HMGB1P29-201ENST00000505659 LILRA2Q8N149 483 aa5.69□□□□□ -1.5
HMGB1P29-201ENST00000505659 FIBCD1Q8N539 461 aa5.69□□□□□ -1.5
HMGB1P29-201ENST00000505659 ADCY4Q8NFM4 1077 aa5.69□□□□□ -1.5
HMGB1P29-201ENST00000505659 KLHL6Q8WZ60 621 aa5.69□□□□□ -1.5
HMGB1P29-201ENST00000505659 SMARCC1Q92922 1105 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P29-201ENST00000505659 SEC16BQ96JE7 1060 aa5.69□□□□□ -1.5
HMGB1P29-201ENST00000505659 HAUS7Q99871 368 aa5.69□□□□□ -1.5
HMGB1P29-201ENST00000505659 SLC12A9Q9BXP2 914 aa5.69□□□□□ -1.5
HMGB1P29-201ENST00000505659 NOL6Q9H6R4 1146 aaKnown RBP5.69□□□□□ -1.5
HMGB1P29-201ENST00000505659 SDHBP21912 280 aa5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 PPP2R5DQ14738 602 aa5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 ANKRD39Q53RE8 183 aa5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 SYDE1Q6ZW31 735 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 NLRX1Q86UT6 975 aa5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 SPPL2CQ8IUH8 684 aa5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 KSR1Q8IVT5 923 aa5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 C19orf47Q8N9M1 422 aaKnown RBP5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 OR6P1Q8NGX9 317 aa5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 INTS4Q96HW7 963 aaKnown RBP5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 FCRL2Q96LA5 508 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 FGD4Q96M96 766 aa5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 ZDHHC15Q96MV8 337 aa5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 EPB41L4BQ9H329 900 aa5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 CAPN10Q9HC96 672 aa5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 DCP1AQ9NPI6 582 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 PRR13Q9NZ81 148 aa5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 YBX2Q9Y2T7 364 aaKnown RBP5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 FHOD1Q9Y613 1164 aa5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 MRVI1Q9Y6F6 885 aa5.68□□□□□ -1.5
HMGB1P29-201ENST00000505659 FADS2P1A8MWK0 482 aa5.67□□□□□ -1.5
HMGB1P29-201ENST00000505659 KRT1P04264 644 aa5.67□□□□□ -1.5
HMGB1P29-201ENST00000505659 GSNP06396 782 aa5.67□□□□□ -1.5
HMGB1P29-201ENST00000505659 EPHX1P07099 455 aa5.67□□□□□ -1.5
HMGB1P29-201ENST00000505659 GSTM1P09488 218 aa5.67□□□□□ -1.5
HMGB1P29-201ENST00000505659 IFNGR1P15260 489 aa5.67□□□□□ -1.5
HMGB1P29-201ENST00000505659 YBX3P16989 372 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB1P29-201ENST00000505659 SLC7A5Q01650 507 aa5.67□□□□□ -1.5
HMGB1P29-201ENST00000505659 SLC14A2Q15849 920 aa5.67□□□□□ -1.5
HMGB1P29-201ENST00000505659 TMEM52Q8NDY8 209 aa5.67□□□□□ -1.5
HMGB1P29-201ENST00000505659 FAM84AQ96KN4 292 aa5.67□□□□□ -1.5
HMGB1P29-201ENST00000505659 KLHL25Q9H0H3 589 aa5.67□□□□□ -1.5
HMGB1P29-201ENST00000505659 PHAXQ9H814 394 aaKnown RBP5.67□□□□□ -1.5
HMGB1P29-201ENST00000505659 NRDCO43847 1150 aa5.66□□□□□ -1.5
HMGB1P29-201ENST00000505659 CD3EP07766 207 aa5.66□□□□□ -1.5
HMGB1P29-201ENST00000505659 ITGA4P13612 1032 aa5.66□□□□□ -1.5
HMGB1P29-201ENST00000505659 KIR2DL1P43626 348 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P29-201ENST00000505659 KIR2DL2P43627 348 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P29-201ENST00000505659 RTP1P59025 263 aa5.66□□□□□ -1.5
HMGB1P29-201ENST00000505659 HSF5Q4G112 596 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P29-201ENST00000505659 CWF19L1Q69YN2 538 aaKnown RBP5.66□□□□□ -1.5
HMGB1P29-201ENST00000505659 ZNF605Q86T29 641 aa5.66□□□□□ -1.5
HMGB1P29-201ENST00000505659 FBXO15Q8NCQ5 510 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P29-201ENST00000505659 SLC38A3Q99624 504 aa5.66□□□□□ -1.5
HMGB1P29-201ENST00000505659 TINF2Q9BSI4 451 aa5.66□□□□□ -1.5
HMGB1P29-201ENST00000505659 MCMBPQ9BTE3 642 aa5.66□□□□□ -1.5
HMGB1P29-201ENST00000505659 SLC6A17Q9H1V8 727 aa5.66□□□□□ -1.5
HMGB1P29-201ENST00000505659 CWC22Q9HCG8 908 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms