RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 SLC7A14Q8TBB6 771 aa7.3□□□□□ -1.24
HMGB1P3-201ENST00000502802 FAM46AQ96IP4 442 aaKnown RBP7.3□□□□□ -1.24
HMGB1P3-201ENST00000502802 CEP89Q96ST8 783 aa7.3□□□□□ -1.24
HMGB1P3-201ENST00000502802 TRIM39Q9HCM9 518 aa7.3□□□□□ -1.24
HMGB1P3-201ENST00000502802 NDOR1Q9UHB4 597 aa7.3□□□□□ -1.24
HMGB1P3-201ENST00000502802 G3BP2Q9UN86 482 aaKnown RBP7.3□□□□□ -1.24
HMGB1P3-201ENST00000502802 C9orf172C9J069 976 aa7.29□□□□□ -1.24
HMGB1P3-201ENST00000502802 DNAJC8O75937 253 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P3-201ENST00000502802 SPATA31C1P0DKV0 1188 aa7.29□□□□□ -1.24
HMGB1P3-201ENST00000502802 KCNJ6P48051 423 aa7.29□□□□□ -1.24
HMGB1P3-201ENST00000502802 GFRA1P56159 465 aa7.29□□□□□ -1.24
HMGB1P3-201ENST00000502802 NRG1Q02297 640 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P3-201ENST00000502802 MAP4K2Q12851 820 aa7.29□□□□□ -1.24
HMGB1P3-201ENST00000502802 SF1Q15637 639 aaKnown RBP7.29□□□□□ -1.24
HMGB1P3-201ENST00000502802 WWC2Q6AWC2 1192 aa7.29□□□□□ -1.24
HMGB1P3-201ENST00000502802 SEZ6L2Q6UXD5 910 aa7.29□□□□□ -1.24
HMGB1P3-201ENST00000502802 PPM1KQ8N3J5 372 aa7.29□□□□□ -1.24
HMGB1P3-201ENST00000502802 GSTCDQ8NEC7 633 aa7.29□□□□□ -1.24
HMGB1P3-201ENST00000502802 UBL7Q96S82 380 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P3-201ENST00000502802 NKX2-4Q9H2Z4 354 aa7.29□□□□□ -1.24
HMGB1P3-201ENST00000502802 SLC52A2Q9HAB3 445 aa7.29□□□□□ -1.24
HMGB1P3-201ENST00000502802 GFOD1Q9NXC2 390 aa7.29□□□□□ -1.24
HMGB1P3-201ENST00000502802 TPX2Q9ULW0 747 aaKnown RBP7.29□□□□□ -1.24
HMGB1P3-201ENST00000502802 SF3B6Q9Y3B4 125 aaKnown RBP7.29□□□□□ -1.24
HMGB1P3-201ENST00000502802 ALG1L2C9J202 215 aa7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 DYNC1LI2O43237 492 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 LRRN2O75325 713 aa7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 EOMESO95936 686 aa7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 SNRPB2P08579 225 aaKnown RBP7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 RXRBP28702 533 aa7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 NOS3P29474 1203 aa7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 PMLP29590 882 aa7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 EXOSC10Q01780 885 aaKnown RBP7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 SNW1Q13573 536 aaKnown RBP7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 UVSSAQ2YD98 709 aa7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 ODR4Q5SWX8 454 aa7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 CCDC181Q5TID7 509 aa7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 DDX46Q7L014 1031 aaKnown RBP7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 BRAPQ7Z569 592 aa7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 AFAP1L2Q8N4X5 818 aa7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 TOP6BLQ8N6T0 577 aa7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 WFDC12Q8WWY7 111 aa7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 PTPRN2Q92932 1015 aa7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 COX4I2Q96KJ9 171 aa7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 NACC1Q96RE7 527 aa7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 DSCC1Q9BVC3 393 aa7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 CYP26B1Q9NR63 512 aa7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 CHPF2Q9P2E5 772 aa7.28□□□□□ -1.24
HMGB1P3-201ENST00000502802 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P3-201ENST00000502802 BLACEA4D250 179 aa7.27□□□□□ -1.25
HMGB1P3-201ENST00000502802 VAMP4O75379 141 aa7.27□□□□□ -1.25
HMGB1P3-201ENST00000502802 CPP00450 1065 aa7.27□□□□□ -1.25
HMGB1P3-201ENST00000502802 ASLP04424 464 aa7.27□□□□□ -1.25
HMGB1P3-201ENST00000502802 SCG5P05408 212 aa7.27□□□□□ -1.25
HMGB1P3-201ENST00000502802 CPEP16870 476 aa7.27□□□□□ -1.25
HMGB1P3-201ENST00000502802 IREB2P48200 963 aaKnown RBP7.27□□□□□ -1.25
HMGB1P3-201ENST00000502802 AMPD2Q01433 879 aa7.27□□□□□ -1.25
HMGB1P3-201ENST00000502802 CDK5R2Q13319 367 aa7.27□□□□□ -1.25
HMGB1P3-201ENST00000502802 BRDTQ58F21 947 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P3-201ENST00000502802 TMEM145Q8NBT3 493 aa7.27□□□□□ -1.25
HMGB1P3-201ENST00000502802 ATL2Q8NHH9 583 aa7.27□□□□□ -1.25
HMGB1P3-201ENST00000502802 JDP2Q8WYK2 163 aa7.27□□□□□ -1.25
HMGB1P3-201ENST00000502802 KCNH3Q9ULD8 1083 aa7.27□□□□□ -1.25
HMGB1P3-201ENST00000502802 FAM95CA0A1B0GW59 222 aa7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 FAM83GA6ND36 823 aa7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 SIGLEC6O43699 453 aa7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 OPA1O60313 960 aa7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 BMP3P12645 472 aa7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 POU3F2P20265 443 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 MAP4P27816 1152 aaKnown RBP7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 NTRK3Q16288 839 aa7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 GPAT2Q6NUI2 795 aa7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 MAMDC2Q7Z304 686 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 PODNQ7Z5L7 613 aa7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 FGD2Q7Z6J4 655 aa7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 BEND7Q8N7W2 519 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 GIMAP7Q8NHV1 300 aa7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 LEO1Q8WVC0 666 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 MYRFLQ96LU7 910 aa7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 ZDHHC15Q96MV8 337 aa7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 DUSP23Q9BVJ7 150 aa7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 C1GALT1Q9NS00 363 aa7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 GPR55Q9Y2T6 319 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 TNPO3Q9Y5L0 923 aaKnown RBP7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 WASHC2CQ9Y4E1 1318 aa7.26□□□□□ -1.25
HMGB1P3-201ENST00000502802 NPTXRO95502 500 aa7.25□□□□□ -1.25
HMGB1P3-201ENST00000502802 APBA3O96018 575 aa7.25□□□□□ -1.25
HMGB1P3-201ENST00000502802 ITIH2P19823 946 aa7.25□□□□□ -1.25
HMGB1P3-201ENST00000502802 IGFALSP35858 605 aa7.25□□□□□ -1.25
HMGB1P3-201ENST00000502802 ECI1P42126 302 aa7.25□□□□□ -1.25
HMGB1P3-201ENST00000502802 NEK4P51957 841 aa7.25□□□□□ -1.25
HMGB1P3-201ENST00000502802 NFKBIBQ15653 356 aa7.25□□□□□ -1.25
HMGB1P3-201ENST00000502802 HSP90AB2PQ58FF8 381 aa7.25□□□□□ -1.25
HMGB1P3-201ENST00000502802 SLC35F1Q5T1Q4 408 aa7.25□□□□□ -1.25
HMGB1P3-201ENST00000502802 SFRP5Q5T4F7 317 aa7.25□□□□□ -1.25
HMGB1P3-201ENST00000502802 TMC3Q7Z5M5 1100 aa7.25□□□□□ -1.25
HMGB1P3-201ENST00000502802 STRA8Q7Z7C7 330 aa7.25□□□□□ -1.25
HMGB1P3-201ENST00000502802 UTP4Q969X6 686 aaKnown RBP7.25□□□□□ -1.25
HMGB1P3-201ENST00000502802 C1orf159Q96HA4 380 aa7.25□□□□□ -1.25
HMGB1P3-201ENST00000502802 SCLYQ96I15 445 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms