RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 SENP6Q9GZR1 1112 aaPredicted RBP13.39□□□□□ -0.27
UBE2D3-211ENST00000502404 SPATC1LQ9H0A9 340 aa13.39□□□□□ -0.27
UBE2D3-211ENST00000502404 ZBTB40Q9NUA8 1239 aa13.39□□□□□ -0.27
UBE2D3-211ENST00000502404 PLXNB2O15031 1838 aa13.39□□□□□ -0.27
UBE2D3-211ENST00000502404 A0A1W2PRG0 241 aa13.38□□□□□ -0.27
UBE2D3-211ENST00000502404 DNM1LO00429 736 aa13.38□□□□□ -0.27
UBE2D3-211ENST00000502404 SOX1O00570 391 aaPredicted RBP13.38□□□□□ -0.27
UBE2D3-211ENST00000502404 FLOT1O75955 427 aa13.38□□□□□ -0.27
UBE2D3-211ENST00000502404 ADORA2AP29274 412 aa13.38□□□□□ -0.27
UBE2D3-211ENST00000502404 ADD2P35612 726 aa13.38□□□□□ -0.27
UBE2D3-211ENST00000502404 ICA1Q05084 483 aa13.38□□□□□ -0.27
UBE2D3-211ENST00000502404 PLS1Q14651 629 aa13.38□□□□□ -0.27
UBE2D3-211ENST00000502404 LRRC26Q2I0M4 334 aa13.38□□□□□ -0.27
UBE2D3-211ENST00000502404 LCORLQ8N3X6 602 aa13.38□□□□□ -0.27
UBE2D3-211ENST00000502404 BOLA2Q9H3K6 86 aa13.38□□□□□ -0.27
UBE2D3-211ENST00000502404 ARMT1Q9H993 441 aa13.38□□□□□ -0.27
UBE2D3-211ENST00000502404 FLRT1Q9NZU1 646 aa13.38□□□□□ -0.27
UBE2D3-211ENST00000502404 COG6Q9Y2V7 657 aa13.38□□□□□ -0.27
UBE2D3-211ENST00000502404 TMX2Q9Y320 296 aa13.38□□□□□ -0.27
UBE2D3-211ENST00000502404 KBTBD13C9JR72 458 aa13.37□□□□□ -0.27
UBE2D3-211ENST00000502404 WDR46O15213 610 aaKnown RBP13.37□□□□□ -0.27
UBE2D3-211ENST00000502404 MBD4O95243 580 aa13.37□□□□□ -0.27
UBE2D3-211ENST00000502404 SLC25A27O95847 323 aa13.37□□□□□ -0.27
UBE2D3-211ENST00000502404 FCER1AP12319 257 aa13.37□□□□□ -0.27
UBE2D3-211ENST00000502404 ERCC3P19447 782 aa13.37□□□□□ -0.27
UBE2D3-211ENST00000502404 CYP2C19P33261 490 aa13.37□□□□□ -0.27
UBE2D3-211ENST00000502404 LSM11P83369 360 aaKnown RBP eCLIP13.37□□□□□ -0.27
UBE2D3-211ENST00000502404 UBE3CQ15386 1083 aa13.37□□□□□ -0.27
UBE2D3-211ENST00000502404 POTEGQ6S5H5 508 aa13.37□□□□□ -0.27
UBE2D3-211ENST00000502404 NCAPG2Q86XI2 1143 aa13.37□□□□□ -0.27
UBE2D3-211ENST00000502404 DEFB123Q8N688 67 aa13.37□□□□□ -0.27
UBE2D3-211ENST00000502404 NPLOC4Q8TAT6 608 aa13.37□□□□□ -0.27
UBE2D3-211ENST00000502404 HAUS7Q99871 368 aa13.37□□□□□ -0.27
UBE2D3-211ENST00000502404 VCPKMTQ9H867 229 aa13.37□□□□□ -0.27
UBE2D3-211ENST00000502404 KANSL2Q9H9L4 492 aa13.37□□□□□ -0.27
UBE2D3-211ENST00000502404 DDX60LQ5H9U9 1706 aaKnown RBP13.36□□□□□ -0.27
UBE2D3-211ENST00000502404 TK2O00142 265 aa13.36□□□□□ -0.27
UBE2D3-211ENST00000502404 CYP2D6P10635 497 aa13.36□□□□□ -0.27
UBE2D3-211ENST00000502404 COPB2P35606 906 aa13.36□□□□□ -0.27
UBE2D3-211ENST00000502404 CDK8P49336 464 aa13.36□□□□□ -0.27
UBE2D3-211ENST00000502404 C12orf60Q5U649 245 aa13.36□□□□□ -0.27
UBE2D3-211ENST00000502404 DYNLL2Q96FJ2 89 aa13.36□□□□□ -0.27
UBE2D3-211ENST00000502404 GOPCQ9HD26 462 aa13.36□□□□□ -0.27
UBE2D3-211ENST00000502404 USP17L12C9JPN9 530 aa13.35□□□□□ -0.27
UBE2D3-211ENST00000502404 USP17L21D6R901 530 aa13.35□□□□□ -0.27
UBE2D3-211ENST00000502404 TRIM66O15016 1216 aa13.35□□□□□ -0.27
UBE2D3-211ENST00000502404 SEPT4O43236 478 aa13.35□□□□□ -0.27
UBE2D3-211ENST00000502404 CYBAP13498 195 aa13.35□□□□□ -0.27
UBE2D3-211ENST00000502404 AKR1B1P15121 316 aa13.35□□□□□ -0.27
UBE2D3-211ENST00000502404 MDM2Q00987 491 aaPredicted RBP13.35□□□□□ -0.27
UBE2D3-211ENST00000502404 SIRT2Q8IXJ6 389 aa13.35□□□□□ -0.27
UBE2D3-211ENST00000502404 SPICE1Q8N0Z3 855 aa13.35□□□□□ -0.27
UBE2D3-211ENST00000502404 SLC44A5Q8NCS7 719 aa13.35□□□□□ -0.27
UBE2D3-211ENST00000502404 GPATCH3Q96I76 525 aa13.35□□□□□ -0.27
UBE2D3-211ENST00000502404 LRRCC1Q9C099 1032 aa13.35□□□□□ -0.27
UBE2D3-211ENST00000502404 NRBP1Q9UHY1 535 aa13.35□□□□□ -0.27
UBE2D3-211ENST00000502404 VPS9D1Q9Y2B5 631 aa13.35□□□□□ -0.27
UBE2D3-211ENST00000502404 SLC4A4Q9Y6R1 1079 aa13.35□□□□□ -0.27
UBE2D3-211ENST00000502404 POTEMA6NI47 508 aa13.34□□□□□ -0.27
UBE2D3-211ENST00000502404 PRKAB2O43741 272 aa13.34□□□□□ -0.27
UBE2D3-211ENST00000502404 OATP04181 439 aa13.34□□□□□ -0.27
UBE2D3-211ENST00000502404 KCTD2Q14681 263 aa13.34□□□□□ -0.27
UBE2D3-211ENST00000502404 C16orf86Q6ZW13 317 aa13.34□□□□□ -0.27
UBE2D3-211ENST00000502404 PACS2Q86VP3 889 aa13.34□□□□□ -0.27
UBE2D3-211ENST00000502404 ATG4CQ96DT6 458 aa13.34□□□□□ -0.27
UBE2D3-211ENST00000502404 ZNF287Q9HBT7 754 aa13.34□□□□□ -0.27
UBE2D3-211ENST00000502404 RABGEF1Q9UJ41 708 aa13.34□□□□□ -0.27
UBE2D3-211ENST00000502404 ALPK3Q96L96 1907 aa13.34□□□□□ -0.27
UBE2D3-211ENST00000502404 RAD21O60216 631 aa13.33□□□□□ -0.28
UBE2D3-211ENST00000502404 COBLO75128 1261 aa13.33□□□□□ -0.28
UBE2D3-211ENST00000502404 IGHA2P01877 340 aa13.33□□□□□ -0.28
UBE2D3-211ENST00000502404 EEF2P13639 858 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-211ENST00000502404 RTP1P59025 263 aa13.33□□□□□ -0.28
UBE2D3-211ENST00000502404 LRRFIP1Q32MZ4 808 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-211ENST00000502404 GJC2Q5T442 439 aaPredicted RBP13.33□□□□□ -0.28
UBE2D3-211ENST00000502404 METTL3Q86U44 580 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-211ENST00000502404 SIAH1Q8IUQ4 282 aa13.33□□□□□ -0.28
UBE2D3-211ENST00000502404 TRPV1Q8NER1 839 aa13.33□□□□□ -0.28
UBE2D3-211ENST00000502404 MMP19Q99542 508 aa13.33□□□□□ -0.28
UBE2D3-211ENST00000502404 ARPP21Q9UBL0 812 aaPredicted RBP13.33□□□□□ -0.28
UBE2D3-211ENST00000502404 RCAN3Q9UKA8 241 aa13.33□□□□□ -0.28
UBE2D3-211ENST00000502404 STXBP5LQ9Y2K9 1186 aa13.33□□□□□ -0.28
UBE2D3-211ENST00000502404 DIS3Q9Y2L1 958 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-211ENST00000502404 NAV1Q8NEY1 1877 aa13.32□□□□□ -0.28
UBE2D3-211ENST00000502404 C3orf80F5H4A9 247 aa13.32□□□□□ -0.28
UBE2D3-211ENST00000502404 DLL1O00548 723 aa13.32□□□□□ -0.28
UBE2D3-211ENST00000502404 STAT3P40763 770 aa13.32□□□□□ -0.28
UBE2D3-211ENST00000502404 AMHR2Q16671 573 aa13.32□□□□□ -0.28
UBE2D3-211ENST00000502404 KIAA1755Q5JYT7 1200 aa13.32□□□□□ -0.28
UBE2D3-211ENST00000502404 FAM109BQ6ICB4 259 aaPredicted RBP13.32□□□□□ -0.28
UBE2D3-211ENST00000502404 GIMAP6Q6P9H5 292 aa13.32□□□□□ -0.28
UBE2D3-211ENST00000502404 SLC39A5Q6ZMH5 540 aa13.32□□□□□ -0.28
UBE2D3-211ENST00000502404 RIOX2Q8IUF8 465 aa13.32□□□□□ -0.28
UBE2D3-211ENST00000502404 MAML3Q96JK9 1138 aa13.32□□□□□ -0.28
UBE2D3-211ENST00000502404 MKNK2Q9HBH9 465 aa13.32□□□□□ -0.28
UBE2D3-211ENST00000502404 ECHDC1Q9NTX5 307 aa13.32□□□□□ -0.28
UBE2D3-211ENST00000502404 ADAMTS5Q9UNA0 930 aa13.32□□□□□ -0.28
UBE2D3-211ENST00000502404 ATP11BQ9Y2G3 1177 aa13.32□□□□□ -0.28
UBE2D3-211ENST00000502404 CTDP1Q9Y5B0 961 aaPredicted RBP13.32□□□□□ -0.28
UBE2D3-211ENST00000502404 SZT2Q5T011 3432 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms