RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 PUS7LQ9H0K6 701 aaKnown RBP17.61■□□□□ 0.41
SEC61A1-207ENST00000498837 STARD7Q9NQZ5 370 aa17.61■□□□□ 0.41
SEC61A1-207ENST00000498837 CNPY2Q9Y2B0 182 aa17.61■□□□□ 0.41
SEC61A1-207ENST00000498837 RIPK3Q9Y572 518 aa17.61■□□□□ 0.41
SEC61A1-207ENST00000498837 SYNRGQ9UMZ2 1314 aa17.61■□□□□ 0.41
SEC61A1-207ENST00000498837 TMEM265A0A087WTH1 108 aa17.6■□□□□ 0.41
SEC61A1-207ENST00000498837 MYADML2A6NDP7 307 aa17.6■□□□□ 0.41
SEC61A1-207ENST00000498837 RAB11FIP3O75154 756 aa17.6■□□□□ 0.41
SEC61A1-207ENST00000498837 HMMRO75330 724 aa17.6■□□□□ 0.41
SEC61A1-207ENST00000498837 COPB2P35606 906 aa17.6■□□□□ 0.41
SEC61A1-207ENST00000498837 UBE3CQ15386 1083 aa17.6■□□□□ 0.41
SEC61A1-207ENST00000498837 KCNA10Q16322 511 aa17.6■□□□□ 0.41
SEC61A1-207ENST00000498837 SNRNP48Q6IEG0 339 aaKnown RBP17.6■□□□□ 0.41
SEC61A1-207ENST00000498837 STK11IPQ8N1F8 1099 aa17.6■□□□□ 0.41
SEC61A1-207ENST00000498837 DDRGK1Q96HY6 314 aa17.6■□□□□ 0.41
SEC61A1-207ENST00000498837 TOX2Q96NM4 488 aa17.6■□□□□ 0.41
SEC61A1-207ENST00000498837 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.59■□□□□ 0.41
SEC61A1-207ENST00000498837 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.59■□□□□ 0.41
SEC61A1-207ENST00000498837 DCDC2CA8MYV0 355 aa17.59■□□□□ 0.41
SEC61A1-207ENST00000498837 DNAJB2P25686 324 aa17.59■□□□□ 0.41
SEC61A1-207ENST00000498837 SLC4A3P48751 1232 aa17.59■□□□□ 0.41
SEC61A1-207ENST00000498837 CCSAPQ6IQ19 270 aaPredicted RBP17.59■□□□□ 0.41
SEC61A1-207ENST00000498837 USP38Q8NB14 1042 aa17.59■□□□□ 0.41
SEC61A1-207ENST00000498837 NUP133Q8WUM0 1156 aa17.59■□□□□ 0.41
SEC61A1-207ENST00000498837 DDX11Q96FC9 970 aa17.59■□□□□ 0.41
SEC61A1-207ENST00000498837 SLF1Q9BQI6 1058 aa17.59■□□□□ 0.41
SEC61A1-207ENST00000498837 TEX13BQ9BXU2 312 aa17.59■□□□□ 0.41
SEC61A1-207ENST00000498837 ZBTB40Q9NUA8 1239 aa17.59■□□□□ 0.41
SEC61A1-207ENST00000498837 FAM184BQ9ULE4 1060 aa17.59■□□□□ 0.41
SEC61A1-207ENST00000498837 NCOR1O75376 2440 aa17.59■□□□□ 0.41
SEC61A1-207ENST00000498837 CHD9Q3L8U1 2897 aa17.58■□□□□ 0.41
SEC61A1-207ENST00000498837 SYNGAP1Q96PV0 1343 aa17.58■□□□□ 0.4
SEC61A1-207ENST00000498837 DNAJC25-GNG10A0A024R161 153 aa17.58■□□□□ 0.4
SEC61A1-207ENST00000498837 ADCY6O43306 1168 aa17.58■□□□□ 0.4
SEC61A1-207ENST00000498837 TIMP1P01033 207 aa17.58■□□□□ 0.4
SEC61A1-207ENST00000498837 RASA1P20936 1047 aa17.58■□□□□ 0.4
SEC61A1-207ENST00000498837 MAMDC4Q6UXC1 1216 aa17.58■□□□□ 0.4
SEC61A1-207ENST00000498837 MSL3Q8N5Y2 521 aaKnown RBP17.58■□□□□ 0.4
SEC61A1-207ENST00000498837 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.58■□□□□ 0.4
SEC61A1-207ENST00000498837 ZHX1Q9UKY1 873 aaPredicted RBP17.58■□□□□ 0.4
SEC61A1-207ENST00000498837 COG6Q9Y2V7 657 aa17.58■□□□□ 0.4
SEC61A1-207ENST00000498837 MOXD2PA6NHM9 499 aa17.57■□□□□ 0.4
SEC61A1-207ENST00000498837 F5H6K3 240 aa17.57■□□□□ 0.4
SEC61A1-207ENST00000498837 NDUFB10O96000 172 aa17.57■□□□□ 0.4
SEC61A1-207ENST00000498837 KLRC3Q07444 240 aa17.57■□□□□ 0.4
SEC61A1-207ENST00000498837 C16orf59Q7L2K0 433 aa17.57■□□□□ 0.4
SEC61A1-207ENST00000498837 CPXCR1Q8N123 301 aa17.57■□□□□ 0.4
SEC61A1-207ENST00000498837 ZNF576Q9H609 170 aa17.57■□□□□ 0.4
SEC61A1-207ENST00000498837 PRDM6Q9NQX0 595 aa17.57■□□□□ 0.4
SEC61A1-207ENST00000498837 NYAP2Q9P242 653 aa17.57■□□□□ 0.4
SEC61A1-207ENST00000498837 ARPP21Q9UBL0 812 aaPredicted RBP17.57■□□□□ 0.4
SEC61A1-207ENST00000498837 TBX21Q9UL17 535 aa17.57■□□□□ 0.4
SEC61A1-207ENST00000498837 DUSP11O75319 330 aaKnown RBP17.56■□□□□ 0.4
SEC61A1-207ENST00000498837 CDK7P50613 346 aa17.56■□□□□ 0.4
SEC61A1-207ENST00000498837 ACVR2BQ13705 512 aa17.56■□□□□ 0.4
SEC61A1-207ENST00000498837 SBK1Q52WX2 424 aa17.56■□□□□ 0.4
SEC61A1-207ENST00000498837 PRPF38AQ8NAV1 312 aaKnown RBP17.56■□□□□ 0.4
SEC61A1-207ENST00000498837 STRBPQ96SI9 672 aaKnown RBP17.56■□□□□ 0.4
SEC61A1-207ENST00000498837 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.56■□□□□ 0.4
SEC61A1-207ENST00000498837 GSG1L2A8MUP6 293 aa17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 GRXCR1A8MXD5 290 aa17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 MINDY4BA8MYZ0 360 aa17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 SMARCA5O60264 1052 aaPredicted RBP17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 ASGR1P07306 291 aa17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 C6orf222P0C671 652 aaPredicted RBP17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 MS4A1P11836 297 aa17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 CST5P28325 142 aaPredicted RBP17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 CCDC144BQ3MJ40 725 aa17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 TMEM240Q5SV17 173 aa17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 MFSD5Q6N075 450 aa17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 ZSCAN25Q6NSZ9 544 aa17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 SYMPKQ92797 1274 aaKnown RBP17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 VTI1AQ96AJ9 217 aa17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 TIFAQ96CG3 184 aa17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 FGD4Q96M96 766 aa17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 GLT1D1Q96MS3 346 aa17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 MKNK2Q9HBH9 465 aa17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 RAVER2Q9HCJ3 691 aaKnown RBP17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 CLIP2Q9UDT6 1046 aa17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 DDX19BQ9UMR2 479 aa17.55■□□□□ 0.4
SEC61A1-207ENST00000498837 ELP1O95163 1332 aa17.54■□□□□ 0.4
SEC61A1-207ENST00000498837 TCF20Q9UGU0 1960 aaKnown RBP17.54■□□□□ 0.4
SEC61A1-207ENST00000498837 ATP2A1O14983 1001 aa17.54■□□□□ 0.4
SEC61A1-207ENST00000498837 ZBED4O75132 1171 aa17.54■□□□□ 0.4
SEC61A1-207ENST00000498837 PBX2P40425 430 aa17.54■□□□□ 0.4
SEC61A1-207ENST00000498837 ZNF467Q7Z7K2 595 aaPredicted RBP17.54■□□□□ 0.4
SEC61A1-207ENST00000498837 KIFC2Q96AC6 838 aa17.54■□□□□ 0.4
SEC61A1-207ENST00000498837 UPF3AQ9H1J1 476 aaKnown RBP17.54■□□□□ 0.4
SEC61A1-207ENST00000498837 LCTP09848 1927 aa17.54■□□□□ 0.4
SEC61A1-207ENST00000498837 MROH7Q68CQ1 1323 aa17.53■□□□□ 0.4
SEC61A1-207ENST00000498837 IGKV6D-41A0A0C4DH26 115 aa17.53■□□□□ 0.4
SEC61A1-207ENST00000498837 ACRP10323 421 aa17.53■□□□□ 0.4
SEC61A1-207ENST00000498837 CSF2RAP15509 400 aa17.53■□□□□ 0.4
SEC61A1-207ENST00000498837 GJA9P57773 515 aa17.53■□□□□ 0.4
SEC61A1-207ENST00000498837 PPIGQ13427 754 aaKnown RBP eCLIP17.53■□□□□ 0.4
SEC61A1-207ENST00000498837 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.53■□□□□ 0.4
SEC61A1-207ENST00000498837 ANKRD35Q8N283 1001 aa17.53■□□□□ 0.4
SEC61A1-207ENST00000498837 PCSK9Q8NBP7 692 aaKnown RBP17.53■□□□□ 0.4
SEC61A1-207ENST00000498837 PBX4Q9BYU1 374 aa17.53■□□□□ 0.4
SEC61A1-207ENST00000498837 ABHD16BQ9H3Z7 469 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms