RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 CRAMP1Q96RY5 1269 aa13.57□□□□□ -0.24
HCN3-204ENST00000496230 MYL5Q02045 173 aa13.57□□□□□ -0.24
HCN3-204ENST00000496230 PCDHA6Q9UN73 950 aa13.57□□□□□ -0.24
HCN3-204ENST00000496230 CTNND2Q9UQB3 1225 aa13.57□□□□□ -0.24
HCN3-204ENST00000496230 PCDHA8Q9Y5H6 950 aa13.57□□□□□ -0.24
HCN3-204ENST00000496230 UBA7P41226 1012 aa13.56□□□□□ -0.24
HCN3-204ENST00000496230 STAT6P42226 847 aa13.56□□□□□ -0.24
HCN3-204ENST00000496230 SEPT2Q15019 361 aa13.56□□□□□ -0.24
HCN3-204ENST00000496230 TBCKQ8TEA7 893 aa13.56□□□□□ -0.24
HCN3-204ENST00000496230 RRP36Q96EU6 259 aaKnown RBP13.56□□□□□ -0.24
HCN3-204ENST00000496230 TRIM49BA6NDI0 452 aa13.56□□□□□ -0.24
HCN3-204ENST00000496230 UBXN2AP68543 259 aa13.56□□□□□ -0.24
HCN3-204ENST00000496230 APOBEC3HQ6NTF7 200 aaKnown RBP13.56□□□□□ -0.24
HCN3-204ENST00000496230 DYMQ7RTS9 669 aa13.56□□□□□ -0.24
HCN3-204ENST00000496230 PRMT6Q96LA8 375 aaPredicted RBP13.56□□□□□ -0.24
HCN3-204ENST00000496230 COA1Q9GZY4 146 aa13.56□□□□□ -0.24
HCN3-204ENST00000496230 VPS16Q9H269 839 aa13.56□□□□□ -0.24
HCN3-204ENST00000496230 FZD1Q9UP38 647 aa13.56□□□□□ -0.24
HCN3-204ENST00000496230 SHTN1A0MZ66 631 aa13.56□□□□□ -0.24
HCN3-204ENST00000496230 TEX33O43247 280 aa13.56□□□□□ -0.24
HCN3-204ENST00000496230 ACTN4O43707 911 aaKnown RBP13.56□□□□□ -0.24
HCN3-204ENST00000496230 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
HCN3-204ENST00000496230 PCDHA4Q9UN74 947 aa13.56□□□□□ -0.24
HCN3-204ENST00000496230 COL5A3P25940 1745 aaPredicted RBP13.56□□□□□ -0.24
HCN3-204ENST00000496230 LRP5O75197 1615 aa13.56□□□□□ -0.24
HCN3-204ENST00000496230 SFPQP23246 707 aaKnown RBP eCLIP13.55□□□□□ -0.24
HCN3-204ENST00000496230 HOXA10P31260 410 aaPredicted RBP13.55□□□□□ -0.24
HCN3-204ENST00000496230 ARMCX5Q6P1M9 558 aa13.55□□□□□ -0.24
HCN3-204ENST00000496230 C16orf86Q6ZW13 317 aa13.55□□□□□ -0.24
HCN3-204ENST00000496230 TBC1D22AQ8WUA7 517 aa13.55□□□□□ -0.24
HCN3-204ENST00000496230 MED15Q96RN5 788 aa13.55□□□□□ -0.24
HCN3-204ENST00000496230 ZHX3Q9H4I2 956 aa13.55□□□□□ -0.24
HCN3-204ENST00000496230 TDP2O95551 362 aa13.55□□□□□ -0.24
HCN3-204ENST00000496230 FGRP09769 529 aa13.55□□□□□ -0.24
HCN3-204ENST00000496230 PPP4CP60510 307 aa13.55□□□□□ -0.24
HCN3-204ENST00000496230 DTHD1Q6ZMT9 781 aa13.55□□□□□ -0.24
HCN3-204ENST00000496230 AKT1S1Q96B36 256 aa13.55□□□□□ -0.24
HCN3-204ENST00000496230 DESI2Q9BSY9 194 aa13.55□□□□□ -0.24
HCN3-204ENST00000496230 HSD3B7Q9H2F3 369 aa13.55□□□□□ -0.24
HCN3-204ENST00000496230 MTMR4Q9NYA4 1195 aa13.55□□□□□ -0.24
HCN3-204ENST00000496230 TBC1D7Q9P0N9 293 aa13.55□□□□□ -0.24
HCN3-204ENST00000496230 HOOK1Q9UJC3 728 aaKnown RBP13.55□□□□□ -0.24
HCN3-204ENST00000496230 CHD4Q14839 1912 aa13.55□□□□□ -0.24
HCN3-204ENST00000496230 POTEMA6NI47 508 aa13.54□□□□□ -0.24
HCN3-204ENST00000496230 SMTNL1A8MU46 457 aa13.54□□□□□ -0.24
HCN3-204ENST00000496230 RIOK3O14730 519 aaKnown RBP13.54□□□□□ -0.24
HCN3-204ENST00000496230 DPYDQ12882 1025 aa13.54□□□□□ -0.24
HCN3-204ENST00000496230 GRM4Q14833 912 aa13.54□□□□□ -0.24
HCN3-204ENST00000496230 PRAMEF18Q5VWM3 479 aa13.54□□□□□ -0.24
HCN3-204ENST00000496230 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
HCN3-204ENST00000496230 ZNF287Q9HBT7 754 aa13.54□□□□□ -0.24
HCN3-204ENST00000496230 STXBP3O00186 592 aa13.54□□□□□ -0.24
HCN3-204ENST00000496230 PDHBP11177 359 aa13.54□□□□□ -0.24
HCN3-204ENST00000496230 TOP1P11387 765 aaKnown RBP13.54□□□□□ -0.24
HCN3-204ENST00000496230 IDEP14735 1019 aa13.54□□□□□ -0.24
HCN3-204ENST00000496230 MDM2Q00987 491 aaPredicted RBP13.54□□□□□ -0.24
HCN3-204ENST00000496230 CCDC178Q5BJE1 867 aa13.54□□□□□ -0.24
HCN3-204ENST00000496230 SLF2Q8IX21 1173 aa13.54□□□□□ -0.24
HCN3-204ENST00000496230 MTRQ99707 1265 aa13.54□□□□□ -0.24
HCN3-204ENST00000496230 LAMB2P55268 1798 aa13.54□□□□□ -0.24
HCN3-204ENST00000496230 PLCG2P16885 1265 aa13.54□□□□□ -0.24
HCN3-204ENST00000496230 LARGE2Q8N3Y3 721 aa13.54□□□□□ -0.24
HCN3-204ENST00000496230 NEDD1Q8NHV4 660 aa13.54□□□□□ -0.24
HCN3-204ENST00000496230 EEF2P13639 858 aaKnown RBP13.53□□□□□ -0.24
HCN3-204ENST00000496230 HOXA13P31271 388 aaPredicted RBP13.53□□□□□ -0.24
HCN3-204ENST00000496230 SLC1A4P43007 532 aa13.53□□□□□ -0.24
HCN3-204ENST00000496230 JAG1P78504 1218 aa13.53□□□□□ -0.24
HCN3-204ENST00000496230 ZNF772Q68DY9 489 aaPredicted RBP13.53□□□□□ -0.24
HCN3-204ENST00000496230 ADGRF4Q8IZF3 695 aa13.53□□□□□ -0.24
HCN3-204ENST00000496230 HLA-DOAP06340 250 aa13.53□□□□□ -0.24
HCN3-204ENST00000496230 DGKZQ13574 1117 aa13.53□□□□□ -0.24
HCN3-204ENST00000496230 CERKLQ49MI3 558 aaPredicted RBP13.53□□□□□ -0.24
HCN3-204ENST00000496230 FCHSD1Q86WN1 690 aa13.53□□□□□ -0.24
HCN3-204ENST00000496230 BARHL2Q9NY43 387 aa13.53□□□□□ -0.24
HCN3-204ENST00000496230 PALM3A6NDB9 673 aaPredicted RBP13.52□□□□□ -0.24
HCN3-204ENST00000496230 GH2P01242 217 aa13.52□□□□□ -0.24
HCN3-204ENST00000496230 TNFRSF25Q93038 417 aa13.52□□□□□ -0.24
HCN3-204ENST00000496230 CSRNP1Q96S65 589 aa13.52□□□□□ -0.24
HCN3-204ENST00000496230 OSBPL5Q9H0X9 879 aaPredicted RBP13.52□□□□□ -0.24
HCN3-204ENST00000496230 TUBE1Q9UJT0 475 aa13.52□□□□□ -0.24
HCN3-204ENST00000496230 DUOX1Q9NRD9 1551 aa13.52□□□□□ -0.24
HCN3-204ENST00000496230 SHMT1P34896 483 aa13.52□□□□□ -0.24
HCN3-204ENST00000496230 SLC15A2Q16348 729 aa13.52□□□□□ -0.24
HCN3-204ENST00000496230 DNAJC18Q9H819 358 aa13.52□□□□□ -0.24
HCN3-204ENST00000496230 SLFN14P0C7P3 912 aa13.52□□□□□ -0.25
HCN3-204ENST00000496230 CALML3P27482 149 aa13.52□□□□□ -0.25
HCN3-204ENST00000496230 ECE1P42892 770 aa13.52□□□□□ -0.25
HCN3-204ENST00000496230 REXO1Q8N1G1 1221 aaKnown RBP13.52□□□□□ -0.25
HCN3-204ENST00000496230 IQUBQ8NA54 791 aa13.52□□□□□ -0.25
HCN3-204ENST00000496230 TAB2Q9NYJ8 693 aa13.52□□□□□ -0.25
HCN3-204ENST00000496230 PKD2L1Q9P0L9 805 aa13.52□□□□□ -0.25
HCN3-204ENST00000496230 ATP2C1P98194 919 aaPredicted RBP13.51□□□□□ -0.25
HCN3-204ENST00000496230 MTF1Q14872 753 aa13.51□□□□□ -0.25
HCN3-204ENST00000496230 LRRC15Q8TF66 581 aa13.51□□□□□ -0.25
HCN3-204ENST00000496230 STK32BQ9NY57 414 aa13.51□□□□□ -0.25
HCN3-204ENST00000496230 SLC37A4O43826 429 aa13.51□□□□□ -0.25
HCN3-204ENST00000496230 MYH6P13533 1939 aa13.51□□□□□ -0.25
HCN3-204ENST00000496230 PRKG1Q13976 671 aa13.51□□□□□ -0.25
HCN3-204ENST00000496230 PPP2R5BQ15173 497 aa13.51□□□□□ -0.25
HCN3-204ENST00000496230 SH3BP5LQ7L8J4 393 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms