RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 F11P03951 625 aa12.13□□□□□ -0.47
RAB11FIP3-211ENST00000495663 TNFAIP1Q13829 316 aa12.13□□□□□ -0.47
RAB11FIP3-211ENST00000495663 ZMYM1Q5SVZ6 1142 aa12.13□□□□□ -0.47
RAB11FIP3-211ENST00000495663 RNF135Q8IUD6 432 aa12.13□□□□□ -0.47
RAB11FIP3-211ENST00000495663 APOBEC3FQ8IUX4 373 aaKnown RBP12.13□□□□□ -0.47
RAB11FIP3-211ENST00000495663 AIDAQ96BJ3 306 aa12.13□□□□□ -0.47
RAB11FIP3-211ENST00000495663 PUS7LQ9H0K6 701 aaKnown RBP12.13□□□□□ -0.47
RAB11FIP3-211ENST00000495663 VEZTQ9HBM0 779 aa12.13□□□□□ -0.47
RAB11FIP3-211ENST00000495663 DIAPH3Q9NSV4 1193 aa12.13□□□□□ -0.47
RAB11FIP3-211ENST00000495663 MYH1P12882 1939 aa12.13□□□□□ -0.47
RAB11FIP3-211ENST00000495663 ASTN2O75129 1339 aaPredicted RBP12.12□□□□□ -0.47
RAB11FIP3-211ENST00000495663 MBD4O95243 580 aa12.12□□□□□ -0.47
RAB11FIP3-211ENST00000495663 TNNI2P48788 182 aa12.12□□□□□ -0.47
RAB11FIP3-211ENST00000495663 RHBDL3P58872 404 aa12.12□□□□□ -0.47
RAB11FIP3-211ENST00000495663 DYNLL1P63167 89 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP3-211ENST00000495663 WDR44Q5JSH3 913 aa12.12□□□□□ -0.47
RAB11FIP3-211ENST00000495663 FKBP1CQ5VVH2 108 aa12.12□□□□□ -0.47
RAB11FIP3-211ENST00000495663 TEX11Q8IYF3 940 aa12.12□□□□□ -0.47
RAB11FIP3-211ENST00000495663 SH3RF3Q8TEJ3 882 aaPredicted RBP12.12□□□□□ -0.47
RAB11FIP3-211ENST00000495663 OSBP2Q969R2 916 aa12.12□□□□□ -0.47
RAB11FIP3-211ENST00000495663 RIOK1Q9BRS2 568 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP3-211ENST00000495663 HELLSQ9NRZ9 838 aa12.12□□□□□ -0.47
RAB11FIP3-211ENST00000495663 TCP10L2B9ZVM9 353 aa12.11□□□□□ -0.47
RAB11FIP3-211ENST00000495663 TOMM70O94826 608 aa12.11□□□□□ -0.47
RAB11FIP3-211ENST00000495663 THBS1P07996 1170 aa12.11□□□□□ -0.47
RAB11FIP3-211ENST00000495663 CACNB3P54284 484 aa12.11□□□□□ -0.47
RAB11FIP3-211ENST00000495663 NMIQ13287 307 aaPredicted RBP12.11□□□□□ -0.47
RAB11FIP3-211ENST00000495663 MCMDC2Q4G0Z9 681 aa12.11□□□□□ -0.47
RAB11FIP3-211ENST00000495663 TMEM214Q6NUQ4 689 aaKnown RBP12.11□□□□□ -0.47
RAB11FIP3-211ENST00000495663 CWC27Q6UX04 472 aaKnown RBP12.11□□□□□ -0.47
RAB11FIP3-211ENST00000495663 CDC37L1Q7L3B6 337 aa12.11□□□□□ -0.47
RAB11FIP3-211ENST00000495663 PHTF2Q8N3S3 785 aa12.11□□□□□ -0.47
RAB11FIP3-211ENST00000495663 LCORLQ8N3X6 602 aa12.11□□□□□ -0.47
RAB11FIP3-211ENST00000495663 FAM227BQ96M60 508 aa12.11□□□□□ -0.47
RAB11FIP3-211ENST00000495663 SEC62Q99442 399 aaKnown RBP12.11□□□□□ -0.47
RAB11FIP3-211ENST00000495663 IDI2Q9BXS1 227 aa12.11□□□□□ -0.47
RAB11FIP3-211ENST00000495663 CRNKL1Q9BZJ0 848 aaKnown RBP12.11□□□□□ -0.47
RAB11FIP3-211ENST00000495663 ARMT1Q9H993 441 aa12.11□□□□□ -0.47
RAB11FIP3-211ENST00000495663 HRH3Q9Y5N1 445 aa12.11□□□□□ -0.47
RAB11FIP3-211ENST00000495663 TRPM7Q96QT4 1865 aa12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 BAZ2AQ9UIF9 1905 aaKnown RBP12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 A0A0D9SFI3 127 aa12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 M0R2C6 588 aa12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 GPAA1O43292 621 aa12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 ENTPD3O75355 529 aa12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 WDHD1O75717 1129 aaPredicted RBP12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 MX2P20592 715 aa12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 CHMLP26374 656 aa12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 USP5P45974 858 aa12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 MFAP1P55081 439 aaKnown RBP12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 PICALMQ13492 652 aa12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 MAP1SQ66K74 1059 aaPredicted RBP12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 CASC1Q6TDU7 716 aa12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 KRT26Q7Z3Y9 468 aa12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 FAM83AQ86UY5 434 aa12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 SMC1BQ8NDV3 1235 aa12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 RUFY2Q8WXA3 655 aa12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 ETNK1Q9HBU6 452 aa12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 PPP2R3BQ9Y5P8 575 aa12.1□□□□□ -0.47
RAB11FIP3-211ENST00000495663 DDX60LQ5H9U9 1706 aaKnown RBP12.09□□□□□ -0.47
RAB11FIP3-211ENST00000495663 CDC45O75419 566 aa12.09□□□□□ -0.47
RAB11FIP3-211ENST00000495663 GNAT2P19087 354 aa12.09□□□□□ -0.47
RAB11FIP3-211ENST00000495663 TCP10Q12799 353 aa12.09□□□□□ -0.47
RAB11FIP3-211ENST00000495663 NFIAQ12857 509 aa12.09□□□□□ -0.47
RAB11FIP3-211ENST00000495663 RASA3Q14644 834 aa12.09□□□□□ -0.47
RAB11FIP3-211ENST00000495663 GNASQ5JWF2 1037 aa12.09□□□□□ -0.47
RAB11FIP3-211ENST00000495663 TGFBRAP1Q8WUH2 860 aa12.09□□□□□ -0.47
RAB11FIP3-211ENST00000495663 FAM151AQ8WW52 585 aa12.09□□□□□ -0.47
RAB11FIP3-211ENST00000495663 ACDQ96AP0 544 aa12.09□□□□□ -0.47
RAB11FIP3-211ENST00000495663 STRBPQ96SI9 672 aaKnown RBP12.09□□□□□ -0.47
RAB11FIP3-211ENST00000495663 GLIS2Q9BZE0 524 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP3-211ENST00000495663 DEFB129Q9H1M3 183 aa12.09□□□□□ -0.47
RAB11FIP3-211ENST00000495663 SCAF8Q9UPN6 1271 aaKnown RBP12.09□□□□□ -0.47
RAB11FIP3-211ENST00000495663 SLC4A4Q9Y6R1 1079 aa12.09□□□□□ -0.47
RAB11FIP3-211ENST00000495663 RAD50Q92878 1312 aa12.09□□□□□ -0.47
RAB11FIP3-211ENST00000495663 CEP350Q5VT06 3117 aa12.09□□□□□ -0.47
RAB11FIP3-211ENST00000495663 COL2A1P02458 1487 aaPredicted RBP12.08□□□□□ -0.47
RAB11FIP3-211ENST00000495663 CNTNAP1P78357 1384 aa12.08□□□□□ -0.48
RAB11FIP3-211ENST00000495663 RPAP1Q9BWH6 1393 aaPredicted RBP12.08□□□□□ -0.48
RAB11FIP3-211ENST00000495663 LAMB1P07942 1786 aa12.08□□□□□ -0.48
RAB11FIP3-211ENST00000495663 ADM5C9JUS6 153 aa12.08□□□□□ -0.48
RAB11FIP3-211ENST00000495663 USP4Q13107 963 aa12.08□□□□□ -0.48
RAB11FIP3-211ENST00000495663 C4orf17Q53FE4 359 aa12.08□□□□□ -0.48
RAB11FIP3-211ENST00000495663 CCDC129Q6ZRS4 1044 aa12.08□□□□□ -0.48
RAB11FIP3-211ENST00000495663 USP48Q86UV5 1035 aa12.08□□□□□ -0.48
RAB11FIP3-211ENST00000495663 MAPKAPK5Q8IW41 473 aa12.08□□□□□ -0.48
RAB11FIP3-211ENST00000495663 SDR42E1Q8WUS8 393 aa12.08□□□□□ -0.48
RAB11FIP3-211ENST00000495663 SCARF2Q96GP6 870 aaPredicted RBP12.08□□□□□ -0.48
RAB11FIP3-211ENST00000495663 OSBPL5Q9H0X9 879 aaPredicted RBP12.08□□□□□ -0.48
RAB11FIP3-211ENST00000495663 RUBCNLQ9H714 662 aa12.08□□□□□ -0.48
RAB11FIP3-211ENST00000495663 DDX4Q9NQI0 724 aaKnown RBP12.08□□□□□ -0.48
RAB11FIP3-211ENST00000495663 ATP8A2Q9NTI2 1148 aa12.08□□□□□ -0.48
RAB11FIP3-211ENST00000495663 FLT1P17948 1338 aa12.08□□□□□ -0.48
RAB11FIP3-211ENST00000495663 CCDC171Q6TFL3 1326 aa12.08□□□□□ -0.48
RAB11FIP3-211ENST00000495663 PATL2C9JE40 543 aaKnown RBP12.07□□□□□ -0.48
RAB11FIP3-211ENST00000495663 PRKAB2O43741 272 aa12.07□□□□□ -0.48
RAB11FIP3-211ENST00000495663 FSTL1Q12841 308 aa12.07□□□□□ -0.48
RAB11FIP3-211ENST00000495663 ZNF589Q86UQ0 364 aaPredicted RBP12.07□□□□□ -0.48
RAB11FIP3-211ENST00000495663 ZSCAN29Q8IWY8 852 aaPredicted RBP12.07□□□□□ -0.48
RAB11FIP3-211ENST00000495663 TMEM39BQ9GZU3 492 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms