RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 TMEM47Q9BQJ4 181 aa16.78■□□□□ 0.28
CHTOP-206ENST00000495554 ALDH1B1P30837 517 aa16.77■□□□□ 0.28
CHTOP-206ENST00000495554 TBX2Q13207 712 aaPredicted RBP16.77■□□□□ 0.28
CHTOP-206ENST00000495554 E2F4Q16254 413 aa16.77■□□□□ 0.28
CHTOP-206ENST00000495554 SPECC1LQ69YQ0 1117 aa16.77■□□□□ 0.28
CHTOP-206ENST00000495554 SLF2Q8IX21 1173 aa16.77■□□□□ 0.28
CHTOP-206ENST00000495554 SMAP1Q8IYB5 467 aaPredicted RBP16.77■□□□□ 0.28
CHTOP-206ENST00000495554 LZTS2Q9BRK4 669 aa16.77■□□□□ 0.28
CHTOP-206ENST00000495554 ZC3H12CQ9C0D7 883 aaKnown RBP16.77■□□□□ 0.28
CHTOP-206ENST00000495554 DDX60LQ5H9U9 1706 aaKnown RBP16.77■□□□□ 0.28
CHTOP-206ENST00000495554 SPATA1Q5VX52 437 aa16.77■□□□□ 0.27
CHTOP-206ENST00000495554 FAM43BQ6ZT52 329 aaPredicted RBP16.77■□□□□ 0.27
CHTOP-206ENST00000495554 FAM177A1Q8N128 213 aaPredicted RBP16.77■□□□□ 0.27
CHTOP-206ENST00000495554 FLAD1Q8NFF5 587 aa16.77■□□□□ 0.27
CHTOP-206ENST00000495554 CCDC148Q8NFR7 591 aa16.77■□□□□ 0.27
CHTOP-206ENST00000495554 GPKOWQ92917 476 aaPredicted RBP eCLIP16.77■□□□□ 0.27
CHTOP-206ENST00000495554 MXD3Q9BW11 206 aa16.77■□□□□ 0.27
CHTOP-206ENST00000495554 SAMSN1Q9NSI8 373 aaKnown RBP16.77■□□□□ 0.27
CHTOP-206ENST00000495554 STX8Q9UNK0 236 aa16.77■□□□□ 0.27
CHTOP-206ENST00000495554 SNED1Q8TER0 1413 aa16.76■□□□□ 0.27
CHTOP-206ENST00000495554 CYTH3O43739 400 aa16.76■□□□□ 0.27
CHTOP-206ENST00000495554 PDE6BP35913 854 aa16.76■□□□□ 0.27
CHTOP-206ENST00000495554 LONP1P36776 959 aaKnown RBP16.76■□□□□ 0.27
CHTOP-206ENST00000495554 MMP14P50281 582 aa16.76■□□□□ 0.27
CHTOP-206ENST00000495554 IRX3P78415 501 aaPredicted RBP16.76■□□□□ 0.27
CHTOP-206ENST00000495554 NCBP1Q09161 790 aaKnown RBP16.76■□□□□ 0.27
CHTOP-206ENST00000495554 CUL4BQ13620 913 aa16.76■□□□□ 0.27
CHTOP-206ENST00000495554 FCHSD1Q86WN1 690 aa16.76■□□□□ 0.27
CHTOP-206ENST00000495554 IL17AQ16552 155 aa16.76■□□□□ 0.27
CHTOP-206ENST00000495554 DOK7Q18PE1 504 aa16.76■□□□□ 0.27
CHTOP-206ENST00000495554 MSL1Q68DK7 614 aa16.76■□□□□ 0.27
CHTOP-206ENST00000495554 DAGLBQ8NCG7 672 aa16.76■□□□□ 0.27
CHTOP-206ENST00000495554 NEDD1Q8NHV4 660 aa16.76■□□□□ 0.27
CHTOP-206ENST00000495554 MASTLQ96GX5 879 aa16.76■□□□□ 0.27
CHTOP-206ENST00000495554 PARP3Q9Y6F1 533 aa16.76■□□□□ 0.27
CHTOP-206ENST00000495554 CCDC194A0A1B0GVG4 234 aa16.75■□□□□ 0.27
CHTOP-206ENST00000495554 PALM3A6NDB9 673 aaPredicted RBP16.75■□□□□ 0.27
CHTOP-206ENST00000495554 M0R2N6 131 aa16.75■□□□□ 0.27
CHTOP-206ENST00000495554 CASP1P29466 404 aa16.75■□□□□ 0.27
CHTOP-206ENST00000495554 NR1I3Q14994 352 aa16.75■□□□□ 0.27
CHTOP-206ENST00000495554 DPP8Q6V1X1 898 aaPredicted RBP16.75■□□□□ 0.27
CHTOP-206ENST00000495554 PDCL2Q8N4E4 241 aa16.75■□□□□ 0.27
CHTOP-206ENST00000495554 C4orf32Q8N8J7 132 aa16.75■□□□□ 0.27
CHTOP-206ENST00000495554 EYA3Q99504 573 aa16.75■□□□□ 0.27
CHTOP-206ENST00000495554 SUGT1Q9Y2Z0 365 aa16.75■□□□□ 0.27
CHTOP-206ENST00000495554 SYNRGQ9UMZ2 1314 aa16.75■□□□□ 0.27
CHTOP-206ENST00000495554 ARHGAP6O43182 974 aa16.75■□□□□ 0.27
CHTOP-206ENST00000495554 CD44P16070 742 aaKnown RBP16.75■□□□□ 0.27
CHTOP-206ENST00000495554 TXLNAP40222 546 aa16.75■□□□□ 0.27
CHTOP-206ENST00000495554 TYW1BQ6NUM6 668 aa16.75■□□□□ 0.27
CHTOP-206ENST00000495554 PDXDC2PQ6P474 469 aa16.75■□□□□ 0.27
CHTOP-206ENST00000495554 CCDC94Q9BW85 323 aaPredicted RBP16.75■□□□□ 0.27
CHTOP-206ENST00000495554 BARHL2Q9NY43 387 aa16.75■□□□□ 0.27
CHTOP-206ENST00000495554 ZHX1Q9UKY1 873 aaPredicted RBP16.75■□□□□ 0.27
CHTOP-206ENST00000495554 MYH1P12882 1939 aa16.75■□□□□ 0.27
CHTOP-206ENST00000495554 A0A1B0GTH6 734 aa16.74■□□□□ 0.27
CHTOP-206ENST00000495554 F8W031 263 aaPredicted RBP16.74■□□□□ 0.27
CHTOP-206ENST00000495554 WWC2Q6AWC2 1192 aa16.74■□□□□ 0.27
CHTOP-206ENST00000495554 RASGRP2Q7LDG7 609 aa16.74■□□□□ 0.27
CHTOP-206ENST00000495554 COL11A2P13942 1736 aaPredicted RBP16.74■□□□□ 0.27
CHTOP-206ENST00000495554 PPP1R3GB7ZBB8 358 aa16.74■□□□□ 0.27
CHTOP-206ENST00000495554 NOVP48745 357 aa16.74■□□□□ 0.27
CHTOP-206ENST00000495554 PTPN21Q16825 1174 aa16.74■□□□□ 0.27
CHTOP-206ENST00000495554 KLHL10Q6JEL2 608 aa16.74■□□□□ 0.27
CHTOP-206ENST00000495554 HEATR3Q7Z4Q2 680 aa16.74■□□□□ 0.27
CHTOP-206ENST00000495554 TMEM139Q8IV31 216 aa16.74■□□□□ 0.27
CHTOP-206ENST00000495554 DDX4Q9NQI0 724 aaKnown RBP16.74■□□□□ 0.27
CHTOP-206ENST00000495554 CLGNO14967 610 aa16.73■□□□□ 0.27
CHTOP-206ENST00000495554 GTPBP6O43824 516 aaPredicted RBP16.73■□□□□ 0.27
CHTOP-206ENST00000495554 CTAGE1Q96RT6 745 aa16.73■□□□□ 0.27
CHTOP-206ENST00000495554 BAG1Q99933 345 aaPredicted RBP16.73■□□□□ 0.27
CHTOP-206ENST00000495554 PCDHA6Q9UN73 950 aa16.73■□□□□ 0.27
CHTOP-206ENST00000495554 PCDHA8Q9Y5H6 950 aa16.73■□□□□ 0.27
CHTOP-206ENST00000495554 KLRF2D3W0D1 207 aa16.73■□□□□ 0.27
CHTOP-206ENST00000495554 STXBP3O00186 592 aa16.73■□□□□ 0.27
CHTOP-206ENST00000495554 ZSCAN12O43309 604 aa16.73■□□□□ 0.27
CHTOP-206ENST00000495554 STX10O60499 249 aa16.73■□□□□ 0.27
CHTOP-206ENST00000495554 GABPAQ06546 454 aa16.73■□□□□ 0.27
CHTOP-206ENST00000495554 CDKAL1Q5VV42 579 aa16.73■□□□□ 0.27
CHTOP-206ENST00000495554 HOMER1Q86YM7 354 aa16.73■□□□□ 0.27
CHTOP-206ENST00000495554 RASGRP4Q8TDF6 673 aa16.73■□□□□ 0.27
CHTOP-206ENST00000495554 SPZ1Q9BXG8 430 aa16.73■□□□□ 0.27
CHTOP-206ENST00000495554 KCNQ5Q9NR82 932 aa16.73■□□□□ 0.27
CHTOP-206ENST00000495554 TTF2Q9UNY4 1162 aaKnown RBP16.73■□□□□ 0.27
CHTOP-206ENST00000495554 MTMR7Q9Y216 660 aa16.73■□□□□ 0.27
CHTOP-206ENST00000495554 GOLGA8HP0CJ92 632 aa16.72■□□□□ 0.27
CHTOP-206ENST00000495554 GOLGA8FQ08AF8 430 aa16.72■□□□□ 0.27
CHTOP-206ENST00000495554 GOLGA8DPQ0D2H9 430 aa16.72■□□□□ 0.27
CHTOP-206ENST00000495554 SYT10Q6XYQ8 523 aa16.72■□□□□ 0.27
CHTOP-206ENST00000495554 DTHD1Q6ZMT9 781 aa16.72■□□□□ 0.27
CHTOP-206ENST00000495554 APTXQ7Z2E3 356 aaKnown RBP16.72■□□□□ 0.27
CHTOP-206ENST00000495554 TC2NQ8N9U0 490 aa16.72■□□□□ 0.27
CHTOP-206ENST00000495554 STAMQ92783 540 aa16.72■□□□□ 0.27
CHTOP-206ENST00000495554 CEP95Q96GE4 821 aa16.72■□□□□ 0.27
CHTOP-206ENST00000495554 FOCADQ5VW36 1801 aa16.72■□□□□ 0.27
CHTOP-206ENST00000495554 STX17P56962 302 aa16.72■□□□□ 0.27
CHTOP-206ENST00000495554 ETF1P62495 437 aaKnown RBP16.72■□□□□ 0.27
CHTOP-206ENST00000495554 SMYD4Q8IYR2 804 aaPredicted RBP16.72■□□□□ 0.27
CHTOP-206ENST00000495554 CCDC12Q8WUD4 166 aaPredicted RBP16.72■□□□□ 0.27
CHTOP-206ENST00000495554 ZNF622Q969S3 477 aaKnown RBP eCLIP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms