RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 GMCL1P1Q8NEA9 526 aa28.46■■■□□ 2.15
TTC3-224ENST00000494243 FERMT2Q96AC1 680 aa28.46■■■□□ 2.15
TTC3-224ENST00000494243 LBHD1Q9BQE6 289 aaPredicted RBP28.46■■■□□ 2.15
TTC3-224ENST00000494243 XPNPEP3Q9NQH7 507 aa28.46■■■□□ 2.15
TTC3-224ENST00000494243 PLIN4Q96Q06 1357 aa28.46■■■□□ 2.15
TTC3-224ENST00000494243 FOXP2O15409 715 aa28.45■■■□□ 2.14
TTC3-224ENST00000494243 TTLL1O95922 423 aa28.45■■■□□ 2.14
TTC3-224ENST00000494243 RRP1P56182 461 aaKnown RBP28.45■■■□□ 2.14
TTC3-224ENST00000494243 Q7L0L9 218 aa28.45■■■□□ 2.14
TTC3-224ENST00000494243 CPXCR1Q8N123 301 aa28.45■■■□□ 2.14
TTC3-224ENST00000494243 LRRC47Q8N1G4 583 aaKnown RBP28.45■■■□□ 2.14
TTC3-224ENST00000494243 DEFB123Q8N688 67 aa28.45■■■□□ 2.14
TTC3-224ENST00000494243 ZBED4O75132 1171 aa28.44■■■□□ 2.14
TTC3-224ENST00000494243 RARBP10826 455 aa28.44■■■□□ 2.14
TTC3-224ENST00000494243 PPARAQ07869 468 aa28.44■■■□□ 2.14
TTC3-224ENST00000494243 TRIM60Q495X7 471 aa28.44■■■□□ 2.14
TTC3-224ENST00000494243 C1orf53Q5VUE5 145 aa28.44■■■□□ 2.14
TTC3-224ENST00000494243 KIFC2Q96AC6 838 aa28.44■■■□□ 2.14
TTC3-224ENST00000494243 NAPBQ9H115 298 aa28.44■■■□□ 2.14
TTC3-224ENST00000494243 SLC38A10Q9HBR0 1119 aa28.44■■■□□ 2.14
TTC3-224ENST00000494243 RAVER2Q9HCJ3 691 aaKnown RBP28.44■■■□□ 2.14
TTC3-224ENST00000494243 PRKAG2Q9UGJ0 569 aa28.44■■■□□ 2.14
TTC3-224ENST00000494243 FEM1BQ9UK73 627 aa28.44■■■□□ 2.14
TTC3-224ENST00000494243 PHF24Q9UPV7 400 aa28.44■■■□□ 2.14
TTC3-224ENST00000494243 LTBP2Q14767 1821 aa28.43■■■□□ 2.14
TTC3-224ENST00000494243 PGK1P00558 417 aa28.43■■■□□ 2.14
TTC3-224ENST00000494243 TSPY3P0CV98 308 aa28.43■■■□□ 2.14
TTC3-224ENST00000494243 TSPY8P0CW00 308 aa28.43■■■□□ 2.14
TTC3-224ENST00000494243 TFAP4Q01664 338 aa28.43■■■□□ 2.14
TTC3-224ENST00000494243 PDE4BQ07343 736 aa28.43■■■□□ 2.14
TTC3-224ENST00000494243 MAMDC4Q6UXC1 1216 aa28.43■■■□□ 2.14
TTC3-224ENST00000494243 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.43■■■□□ 2.149e-14■■■□□ 14.6
TTC3-224ENST00000494243 DDX11Q96FC9 970 aa28.43■■■□□ 2.14
TTC3-224ENST00000494243 SNAI1O95863 264 aaPredicted RBP28.42■■■□□ 2.14
TTC3-224ENST00000494243 CCDC129Q6ZRS4 1044 aa28.42■■■□□ 2.14
TTC3-224ENST00000494243 MSL3Q8N5Y2 521 aaKnown RBP28.42■■■□□ 2.14
TTC3-224ENST00000494243 LENG1Q96BZ8 264 aaPredicted RBP28.42■■■□□ 2.14
TTC3-224ENST00000494243 SLC3A2P08195 630 aaKnown RBP28.41■■■□□ 2.14
TTC3-224ENST00000494243 AKR1A1P14550 325 aa28.41■■■□□ 2.14
TTC3-224ENST00000494243 SLC4A3P48751 1232 aa28.41■■■□□ 2.14
TTC3-224ENST00000494243 SLFN13Q68D06 897 aa28.41■■■□□ 2.14
TTC3-224ENST00000494243 MTMR10Q9NXD2 777 aa28.41■■■□□ 2.14
TTC3-224ENST00000494243 CNPY2Q9Y2B0 182 aa28.41■■■□□ 2.14
TTC3-224ENST00000494243 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.41■■■□□ 2.145e-6■□□□□ 9.7
TTC3-224ENST00000494243 SYNGAP1Q96PV0 1343 aa28.41■■■□□ 2.14
TTC3-224ENST00000494243 BMP3P12645 472 aa28.4■■■□□ 2.14
TTC3-224ENST00000494243 ANKRD45Q5TZF3 282 aa28.4■■■□□ 2.14
TTC3-224ENST00000494243 SH3RF1Q7Z6J0 888 aa28.4■■■□□ 2.14
TTC3-224ENST00000494243 RNF180Q86T96 592 aa28.4■■■□□ 2.14
TTC3-224ENST00000494243 CRBNQ96SW2 442 aa28.4■■■□□ 2.14
TTC3-224ENST00000494243 INCENPQ9NQS7 918 aa28.4■■■□□ 2.14
TTC3-224ENST00000494243 PDLIM7Q9NR12 457 aa28.4■■■□□ 2.14
TTC3-224ENST00000494243 ADAMTS4O75173 837 aa28.39■■■□□ 2.14
TTC3-224ENST00000494243 OAZ1P54368 228 aa28.39■■■□□ 2.14
TTC3-224ENST00000494243 ZNF467Q7Z7K2 595 aaPredicted RBP28.39■■■□□ 2.14
TTC3-224ENST00000494243 FGD4Q96M96 766 aa28.39■■■□□ 2.14
TTC3-224ENST00000494243 PRDM5Q9NQX1 630 aaPredicted RBP28.39■■■□□ 2.14
TTC3-224ENST00000494243 CTDP1Q9Y5B0 961 aaPredicted RBP28.39■■■□□ 2.14
TTC3-224ENST00000494243 TACC3Q9Y6A5 838 aa28.39■■■□□ 2.14
TTC3-224ENST00000494243 TRIM43BA6NCK2 446 aa28.38■■■□□ 2.13
TTC3-224ENST00000494243 TLE2Q04725 743 aa28.38■■■□□ 2.13
TTC3-224ENST00000494243 CHST13Q8NET6 341 aa28.38■■■□□ 2.13
TTC3-224ENST00000494243 TRIM43Q96BQ3 446 aaPredicted RBP28.38■■■□□ 2.13
TTC3-224ENST00000494243 TMEM232C9JQI7 657 aa28.37■■■□□ 2.13
TTC3-224ENST00000494243 CTDSPL2Q05D32 466 aa28.37■■■□□ 2.13
TTC3-224ENST00000494243 VPS53Q5VIR6 699 aa28.37■■■□□ 2.13
TTC3-224ENST00000494243 BADQ92934 168 aa28.37■■■□□ 2.13
TTC3-224ENST00000494243 GMCL1Q96IK5 515 aa28.37■■■□□ 2.13
TTC3-224ENST00000494243 IL17RBQ9NRM6 502 aa28.37■■■□□ 2.13
TTC3-224ENST00000494243 FAM184BQ9ULE4 1060 aa28.37■■■□□ 2.13
TTC3-224ENST00000494243 A0A1W2PQ45 241 aaPredicted RBP28.36■■■□□ 2.13
TTC3-224ENST00000494243 A0A1W2PQY0 241 aa28.36■■■□□ 2.13
TTC3-224ENST00000494243 POTEB2H3BUK9 544 aa28.36■■■□□ 2.13
TTC3-224ENST00000494243 ANKRD35Q8N283 1001 aa28.36■■■□□ 2.13
TTC3-224ENST00000494243 EVI5LQ96CN4 794 aa28.36■■■□□ 2.13
TTC3-224ENST00000494243 FBXO40Q9UH90 709 aa28.36■■■□□ 2.13
TTC3-224ENST00000494243 COL6A3P12111 3177 aa28.35■■■□□ 2.13
TTC3-224ENST00000494243 FDX1P10109 184 aa28.35■■■□□ 2.13
TTC3-224ENST00000494243 PDE1AP54750 535 aa28.35■■■□□ 2.13
TTC3-224ENST00000494243 HDAC1Q13547 482 aaPredicted RBP28.35■■■□□ 2.13
TTC3-224ENST00000494243 SHHQ15465 462 aa28.35■■■□□ 2.13
TTC3-224ENST00000494243 SLC17A8Q8NDX2 589 aa28.35■■■□□ 2.13
TTC3-224ENST00000494243 KLHDC9Q8NEP7 349 aa28.35■■■□□ 2.13
TTC3-224ENST00000494243 TSEN34Q9BSV6 310 aaKnown RBP28.35■■■□□ 2.13
TTC3-224ENST00000494243 ANAPC4Q9UJX5 808 aa28.35■■■□□ 2.13
TTC3-224ENST00000494243 ZNF536O15090 1300 aa28.35■■■□□ 2.13
TTC3-224ENST00000494243 SYNRGQ9UMZ2 1314 aa28.35■■■□□ 2.13
TTC3-224ENST00000494243 NMT2O60551 498 aa28.34■■■□□ 2.13
TTC3-224ENST00000494243 MCCP23508 829 aa28.34■■■□□ 2.13
TTC3-224ENST00000494243 ITGB8P26012 769 aa28.34■■■□□ 2.13
TTC3-224ENST00000494243 STAT2P52630 851 aa28.34■■■□□ 2.13
TTC3-224ENST00000494243 ACVR2BQ13705 512 aa28.34■■■□□ 2.13
TTC3-224ENST00000494243 CCSAPQ6IQ19 270 aaPredicted RBP28.34■■■□□ 2.13
TTC3-224ENST00000494243 CHURC1Q8WUH1 139 aa28.34■■■□□ 2.13
TTC3-224ENST00000494243 STAG1Q8WVM7 1258 aa28.34■■■□□ 2.13
TTC3-224ENST00000494243 CHMP4CQ96CF2 233 aa28.34■■■□□ 2.13
TTC3-224ENST00000494243 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.34■■■□□ 2.13
TTC3-224ENST00000494243 ZHX1Q9UKY1 873 aaPredicted RBP28.34■■■□□ 2.13
TTC3-224ENST00000494243 STXBP5LQ9Y2K9 1186 aa28.34■■■□□ 2.13
TTC3-224ENST00000494243 ADCY6O43306 1168 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms