RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 SYNRGQ9UMZ2 1314 aa14.78□□□□□ -0.04
SAMM50-205ENST00000493621 SMARCA5O60264 1052 aaPredicted RBP14.78□□□□□ -0.04
SAMM50-205ENST00000493621 ADAMTS4O75173 837 aa14.78□□□□□ -0.04
SAMM50-205ENST00000493621 SLC4A3P48751 1232 aa14.78□□□□□ -0.04
SAMM50-205ENST00000493621 FPGSQ05932 587 aa14.78□□□□□ -0.04
SAMM50-205ENST00000493621 DDX11Q96FC9 970 aa14.78□□□□□ -0.04
SAMM50-205ENST00000493621 TSEN34Q9BSV6 310 aaKnown RBP14.78□□□□□ -0.04
SAMM50-205ENST00000493621 TEX13BQ9BXU2 312 aa14.78□□□□□ -0.04
SAMM50-205ENST00000493621 STARD7Q9NQZ5 370 aa14.78□□□□□ -0.04
SAMM50-205ENST00000493621 ZHX1Q9UKY1 873 aaPredicted RBP14.78□□□□□ -0.04
SAMM50-205ENST00000493621 FAM184BQ9ULE4 1060 aa14.78□□□□□ -0.04
SAMM50-205ENST00000493621 RIPK3Q9Y572 518 aa14.78□□□□□ -0.04
SAMM50-205ENST00000493621 F5H6K3 240 aa14.77□□□□□ -0.05
SAMM50-205ENST00000493621 SNAI1O95863 264 aaPredicted RBP14.77□□□□□ -0.05
SAMM50-205ENST00000493621 FOSL2P15408 326 aa14.77□□□□□ -0.05
SAMM50-205ENST00000493621 RASA1P20936 1047 aa14.77□□□□□ -0.05
SAMM50-205ENST00000493621 ACLYP53396 1101 aa14.77□□□□□ -0.05
SAMM50-205ENST00000493621 KLRC3Q07444 240 aa14.77□□□□□ -0.05
SAMM50-205ENST00000493621 FAAP100Q0VG06 881 aa14.77□□□□□ -0.05
SAMM50-205ENST00000493621 SBK1Q52WX2 424 aa14.77□□□□□ -0.05
SAMM50-205ENST00000493621 STRBPQ96SI9 672 aaKnown RBP14.77□□□□□ -0.05
SAMM50-205ENST00000493621 LRRCC1Q9C099 1032 aa14.77□□□□□ -0.05
SAMM50-205ENST00000493621 MKNK2Q9HBH9 465 aa14.77□□□□□ -0.05
SAMM50-205ENST00000493621 NYAP2Q9P242 653 aa14.77□□□□□ -0.05
SAMM50-205ENST00000493621 SYNGAP1Q96PV0 1343 aa14.76□□□□□ -0.05
SAMM50-205ENST00000493621 GSG1L2A8MUP6 293 aa14.76□□□□□ -0.05
SAMM50-205ENST00000493621 DCDC2CA8MYV0 355 aa14.76□□□□□ -0.05
SAMM50-205ENST00000493621 MINDY4BA8MYZ0 360 aa14.76□□□□□ -0.05
SAMM50-205ENST00000493621 NDUFB10O96000 172 aa14.76□□□□□ -0.05
SAMM50-205ENST00000493621 KCNA10Q16322 511 aa14.76□□□□□ -0.05
SAMM50-205ENST00000493621 ANKRD33Q7Z3H0 272 aa14.76□□□□□ -0.05
SAMM50-205ENST00000493621 CPXCR1Q8N123 301 aa14.76□□□□□ -0.05
SAMM50-205ENST00000493621 MSL3Q8N5Y2 521 aaKnown RBP14.76□□□□□ -0.05
SAMM50-205ENST00000493621 PRPF38AQ8NAV1 312 aaKnown RBP14.76□□□□□ -0.05
SAMM50-205ENST00000493621 NUP133Q8WUM0 1156 aa14.76□□□□□ -0.05
SAMM50-205ENST00000493621 CHMP4BQ9H444 224 aaKnown RBP14.76□□□□□ -0.05
SAMM50-205ENST00000493621 CLIP2Q9UDT6 1046 aa14.76□□□□□ -0.05
SAMM50-205ENST00000493621 CTDP1Q9Y5B0 961 aaPredicted RBP14.76□□□□□ -0.05
SAMM50-205ENST00000493621 DNAJC25-GNG10A0A024R161 153 aa14.75□□□□□ -0.05
SAMM50-205ENST00000493621 TMEM265A0A087WTH1 108 aa14.75□□□□□ -0.05
SAMM50-205ENST00000493621 MYADML2A6NDP7 307 aa14.75□□□□□ -0.05
SAMM50-205ENST00000493621 MOXD2PA6NHM9 499 aa14.75□□□□□ -0.05
SAMM50-205ENST00000493621 ZBED4O75132 1171 aa14.75□□□□□ -0.05
SAMM50-205ENST00000493621 MAMDC4Q6UXC1 1216 aa14.75□□□□□ -0.05
SAMM50-205ENST00000493621 KLHDC9Q8NEP7 349 aa14.75□□□□□ -0.05
SAMM50-205ENST00000493621 KIFC2Q96AC6 838 aa14.75□□□□□ -0.05
SAMM50-205ENST00000493621 TOX2Q96NM4 488 aa14.75□□□□□ -0.05
SAMM50-205ENST00000493621 RAVER2Q9HCJ3 691 aaKnown RBP14.75□□□□□ -0.05
SAMM50-205ENST00000493621 CDH23Q9H251 3354 aa14.74□□□□□ -0.05
SAMM50-205ENST00000493621 DUSP11O75319 330 aaKnown RBP14.74□□□□□ -0.05
SAMM50-205ENST00000493621 IRX5P78411 483 aaPredicted RBP14.74□□□□□ -0.05
SAMM50-205ENST00000493621 ACVR2BQ13705 512 aa14.74□□□□□ -0.05
SAMM50-205ENST00000493621 CCSAPQ6IQ19 270 aaPredicted RBP14.74□□□□□ -0.05
SAMM50-205ENST00000493621 GIMAP6Q6P9H5 292 aa14.74□□□□□ -0.05
SAMM50-205ENST00000493621 OSBP2Q969R2 916 aa14.74□□□□□ -0.05
SAMM50-205ENST00000493621 ECHDC1Q9NTX5 307 aa14.74□□□□□ -0.05
SAMM50-205ENST00000493621 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.74□□□□□ -0.05
SAMM50-205ENST00000493621 IGKV6D-41A0A0C4DH26 115 aa14.73□□□□□ -0.05
SAMM50-205ENST00000493621 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.73□□□□□ -0.05
SAMM50-205ENST00000493621 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.73□□□□□ -0.05
SAMM50-205ENST00000493621 ATP2A1O14983 1001 aa14.73□□□□□ -0.05
SAMM50-205ENST00000493621 ADCY6O43306 1168 aa14.73□□□□□ -0.05
SAMM50-205ENST00000493621 TIMP1P01033 207 aa14.73□□□□□ -0.05
SAMM50-205ENST00000493621 C6orf222P0C671 652 aaPredicted RBP14.73□□□□□ -0.05
SAMM50-205ENST00000493621 DNAJB2P25686 324 aa14.73□□□□□ -0.05
SAMM50-205ENST00000493621 ZNF467Q7Z7K2 595 aaPredicted RBP14.73□□□□□ -0.05
SAMM50-205ENST00000493621 ZNF444Q8N0Y2 327 aaPredicted RBP14.73□□□□□ -0.05
SAMM50-205ENST00000493621 ANKRD35Q8N283 1001 aa14.73□□□□□ -0.05
SAMM50-205ENST00000493621 KBTBD3Q8NAB2 608 aa14.73□□□□□ -0.05
SAMM50-205ENST00000493621 APPBP2Q92624 585 aa14.73□□□□□ -0.05
SAMM50-205ENST00000493621 VTI1AQ96AJ9 217 aa14.73□□□□□ -0.05
SAMM50-205ENST00000493621 GLT1D1Q96MS3 346 aa14.73□□□□□ -0.05
SAMM50-205ENST00000493621 EPB41L4AQ9HCS5 686 aaPredicted RBP14.73□□□□□ -0.05
SAMM50-205ENST00000493621 VCANP13611 3396 aa14.73□□□□□ -0.05
SAMM50-205ENST00000493621 ELP1O95163 1332 aa14.72□□□□□ -0.05
SAMM50-205ENST00000493621 PRDM1O75626 825 aa14.72□□□□□ -0.05
SAMM50-205ENST00000493621 APPP05067 770 aa14.72□□□□□ -0.05
SAMM50-205ENST00000493621 ASGR1P07306 291 aa14.72□□□□□ -0.05
SAMM50-205ENST00000493621 CST5P28325 142 aaPredicted RBP14.72□□□□□ -0.05
SAMM50-205ENST00000493621 TDO2P48775 406 aa14.72□□□□□ -0.05
SAMM50-205ENST00000493621 GRIN2CQ14957 1233 aa14.72□□□□□ -0.05
SAMM50-205ENST00000493621 CCDC144BQ3MJ40 725 aa14.72□□□□□ -0.05
SAMM50-205ENST00000493621 LRRC47Q8N1G4 583 aaKnown RBP14.72□□□□□ -0.05
SAMM50-205ENST00000493621 PCSK9Q8NBP7 692 aaKnown RBP14.72□□□□□ -0.05
SAMM50-205ENST00000493621 CEP95Q96GE4 821 aa14.72□□□□□ -0.05
SAMM50-205ENST00000493621 FGD4Q96M96 766 aa14.72□□□□□ -0.05
SAMM50-205ENST00000493621 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.72□□□□□ -0.05
SAMM50-205ENST00000493621 ABHD16BQ9H3Z7 469 aa14.72□□□□□ -0.05
SAMM50-205ENST00000493621 SPC25Q9HBM1 224 aa14.72□□□□□ -0.05
SAMM50-205ENST00000493621 SLC38A10Q9HBR0 1119 aa14.72□□□□□ -0.05
SAMM50-205ENST00000493621 FEM1BQ9UK73 627 aa14.72□□□□□ -0.05
SAMM50-205ENST00000493621 TBX21Q9UL17 535 aa14.72□□□□□ -0.05
SAMM50-205ENST00000493621 MROH7Q68CQ1 1323 aa14.71□□□□□ -0.05
SAMM50-205ENST00000493621 RNF113AO15541 343 aaKnown RBP14.71□□□□□ -0.05
SAMM50-205ENST00000493621 GPAA1O43292 621 aa14.71□□□□□ -0.05
SAMM50-205ENST00000493621 CDK7P50613 346 aa14.71□□□□□ -0.05
SAMM50-205ENST00000493621 GJA9P57773 515 aa14.71□□□□□ -0.05
SAMM50-205ENST00000493621 TSHZ3Q63HK5 1081 aa14.71□□□□□ -0.05
SAMM50-205ENST00000493621 MFSD5Q6N075 450 aa14.71□□□□□ -0.05
SAMM50-205ENST00000493621 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms