RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 FAM83BQ5T0W9 1011 aa21.24■□□□□ 0.99
NUP50-218ENST00000493456 MAMDC4Q6UXC1 1216 aa21.24■□□□□ 0.99
NUP50-218ENST00000493456 TBX21Q9UL17 535 aa21.24■□□□□ 0.99
NUP50-218ENST00000493456 ELP1O95163 1332 aa21.24■□□□□ 0.99
NUP50-218ENST00000493456 ZBED9Q6R2W3 1325 aa21.24■□□□□ 0.99
NUP50-218ENST00000493456 RAD21O60216 631 aa21.23■□□□□ 0.99
NUP50-218ENST00000493456 DUSP11O75319 330 aaKnown RBP21.23■□□□□ 0.99
NUP50-218ENST00000493456 CST5P28325 142 aaPredicted RBP21.23■□□□□ 0.99
NUP50-218ENST00000493456 PPIGQ13427 754 aaKnown RBP eCLIP21.23■□□□□ 0.99
NUP50-218ENST00000493456 KCNA10Q16322 511 aa21.23■□□□□ 0.99
NUP50-218ENST00000493456 CCSAPQ6IQ19 270 aaPredicted RBP21.23■□□□□ 0.99
NUP50-218ENST00000493456 MFSD5Q6N075 450 aa21.23■□□□□ 0.99
NUP50-218ENST00000493456 ZNF467Q7Z7K2 595 aaPredicted RBP21.23■□□□□ 0.99
NUP50-218ENST00000493456 USP38Q8NB14 1042 aa21.23■□□□□ 0.99
NUP50-218ENST00000493456 GLT1D1Q96MS3 346 aa21.23■□□□□ 0.99
NUP50-218ENST00000493456 SLF1Q9BQI6 1058 aa21.23■□□□□ 0.99
NUP50-218ENST00000493456 ZHX1Q9UKY1 873 aaPredicted RBP21.23■□□□□ 0.99
NUP50-218ENST00000493456 HMMRO75330 724 aa21.22■□□□□ 0.99
NUP50-218ENST00000493456 UBE3CQ15386 1083 aa21.22■□□□□ 0.99
NUP50-218ENST00000493456 SNRNP48Q6IEG0 339 aaKnown RBP21.22■□□□□ 0.99
NUP50-218ENST00000493456 PCSK9Q8NBP7 692 aaKnown RBP21.22■□□□□ 0.99
NUP50-218ENST00000493456 DDX11Q96FC9 970 aa21.22■□□□□ 0.99
NUP50-218ENST00000493456 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.22■□□□□ 0.997e-6■□□□□ 9.4
NUP50-218ENST00000493456 SPC25Q9HBM1 224 aa21.22■□□□□ 0.99
NUP50-218ENST00000493456 XIRP2A4UGR9 3374 aa21.22■□□□□ 0.99
NUP50-218ENST00000493456 CHD7Q9P2D1 2997 aa21.22■□□□□ 0.99
NUP50-218ENST00000493456 DNAJC25-GNG10A0A024R161 153 aa21.21■□□□□ 0.99
NUP50-218ENST00000493456 SMIM22K7EJ46 135 aa21.21■□□□□ 0.99
NUP50-218ENST00000493456 TNFRSF10AO00220 468 aa21.21■□□□□ 0.99
NUP50-218ENST00000493456 SNAI1O95863 264 aaPredicted RBP21.21■□□□□ 0.99
NUP50-218ENST00000493456 SLFNL1Q499Z3 407 aa21.21■□□□□ 0.99
NUP50-218ENST00000493456 GAS2L1Q99501 681 aaPredicted RBP21.21■□□□□ 0.99
NUP50-218ENST00000493456 ARPP21Q9UBL0 812 aaPredicted RBP21.21■□□□□ 0.99
NUP50-218ENST00000493456 SLC4A4Q9Y6R1 1079 aa21.21■□□□□ 0.99
NUP50-218ENST00000493456 GREB1LQ9C091 1923 aaPredicted RBP21.21■□□□□ 0.99
NUP50-218ENST00000493456 APBB1O00213 710 aa21.2■□□□□ 0.98
NUP50-218ENST00000493456 ATP2A1O14983 1001 aa21.2■□□□□ 0.98
NUP50-218ENST00000493456 RAB11FIP3O75154 756 aa21.2■□□□□ 0.98
NUP50-218ENST00000493456 ATP5JP18859 108 aa21.2■□□□□ 0.98
NUP50-218ENST00000493456 CDK7P50613 346 aa21.2■□□□□ 0.98
NUP50-218ENST00000493456 CTR9Q6PD62 1173 aa21.2■□□□□ 0.98
NUP50-218ENST00000493456 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.2■□□□□ 0.98
NUP50-218ENST00000493456 RPAP2Q8IXW5 612 aaPredicted RBP21.2■□□□□ 0.98
NUP50-218ENST00000493456 HAUS7Q99871 368 aa21.2■□□□□ 0.98
NUP50-218ENST00000493456 BOLA2Q9H3K6 86 aa21.2■□□□□ 0.98
NUP50-218ENST00000493456 A0A0U1RQG5 324 aaPredicted RBP21.19■□□□□ 0.98
NUP50-218ENST00000493456 C6orf222P0C671 652 aaPredicted RBP21.19■□□□□ 0.98
NUP50-218ENST00000493456 TMEM240Q5SV17 173 aa21.19■□□□□ 0.98
NUP50-218ENST00000493456 AKNAD1Q5T1N1 836 aa21.19■□□□□ 0.98
NUP50-218ENST00000493456 RASIP1Q5U651 963 aa21.19■□□□□ 0.98
NUP50-218ENST00000493456 ZSCAN25Q6NSZ9 544 aa21.19■□□□□ 0.98
NUP50-218ENST00000493456 PSRC1Q6PGN9 363 aaPredicted RBP21.19■□□□□ 0.98
NUP50-218ENST00000493456 TMEM199Q8N511 208 aa21.19■□□□□ 0.98
NUP50-218ENST00000493456 PRPF38AQ8NAV1 312 aaKnown RBP21.19■□□□□ 0.98
NUP50-218ENST00000493456 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.19■□□□□ 0.98
NUP50-218ENST00000493456 PBX4Q9BYU1 374 aa21.19■□□□□ 0.98
NUP50-218ENST00000493456 ABHD16BQ9H3Z7 469 aa21.19■□□□□ 0.98
NUP50-218ENST00000493456 NYAP2Q9P242 653 aa21.19■□□□□ 0.98
NUP50-218ENST00000493456 RIPK3Q9Y572 518 aa21.19■□□□□ 0.98
NUP50-218ENST00000493456 MYH7P12883 1935 aa21.18■□□□□ 0.98
NUP50-218ENST00000493456 MYADML2A6NDP7 307 aa21.18■□□□□ 0.98
NUP50-218ENST00000493456 ASGR1P07306 291 aa21.18■□□□□ 0.98
NUP50-218ENST00000493456 ACVR2BQ13705 512 aa21.18■□□□□ 0.98
NUP50-218ENST00000493456 CCDC129Q6ZRS4 1044 aa21.18■□□□□ 0.98
NUP50-218ENST00000493456 PANK1Q8TE04 598 aa21.18■□□□□ 0.98
NUP50-218ENST00000493456 ATXN2LQ8WWM7 1075 aaKnown RBP21.18■□□□□ 0.98
NUP50-218ENST00000493456 UPF3AQ9H1J1 476 aaKnown RBP21.18■□□□□ 0.98
NUP50-218ENST00000493456 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.18■□□□□ 0.98
NUP50-218ENST00000493456 FBXO40Q9UH90 709 aa21.18■□□□□ 0.98
NUP50-218ENST00000493456 CTDP1Q9Y5B0 961 aaPredicted RBP21.18■□□□□ 0.98
NUP50-218ENST00000493456 ARVCFO00192 962 aa21.17■□□□□ 0.98
NUP50-218ENST00000493456 TLR3O15455 904 aaKnown RBP21.17■□□□□ 0.98
NUP50-218ENST00000493456 ZBED4O75132 1171 aa21.17■□□□□ 0.98
NUP50-218ENST00000493456 GJA9P57773 515 aa21.17■□□□□ 0.98
NUP50-218ENST00000493456 C16orf59Q7L2K0 433 aa21.17■□□□□ 0.98
NUP50-218ENST00000493456 VTI1AQ96AJ9 217 aa21.17■□□□□ 0.98
NUP50-218ENST00000493456 NUP88Q99567 741 aaPredicted RBP21.17■□□□□ 0.98
NUP50-218ENST00000493456 F5H6K3 240 aa21.16■□□□□ 0.98
NUP50-218ENST00000493456 NDUFB10O96000 172 aa21.16■□□□□ 0.98
NUP50-218ENST00000493456 MS4A1P11836 297 aa21.16■□□□□ 0.98
NUP50-218ENST00000493456 CSF2RAP15509 400 aa21.16■□□□□ 0.98
NUP50-218ENST00000493456 KLRC3Q07444 240 aa21.16■□□□□ 0.98
NUP50-218ENST00000493456 CCDC144BQ3MJ40 725 aa21.16■□□□□ 0.98
NUP50-218ENST00000493456 SBK1Q52WX2 424 aa21.16■□□□□ 0.98
NUP50-218ENST00000493456 ANKRD35Q8N283 1001 aa21.16■□□□□ 0.98
NUP50-218ENST00000493456 THEGQ9P2T0 379 aa21.16■□□□□ 0.98
NUP50-218ENST00000493456 REV3LO60673 3130 aa21.15■□□□□ 0.98
NUP50-218ENST00000493456 ADCY6O43306 1168 aa21.15■□□□□ 0.98
NUP50-218ENST00000493456 RASA1P20936 1047 aa21.15■□□□□ 0.98
NUP50-218ENST00000493456 PBX2P40425 430 aa21.15■□□□□ 0.98
NUP50-218ENST00000493456 OAZ1P54368 228 aa21.15■□□□□ 0.98
NUP50-218ENST00000493456 RAB30Q15771 203 aa21.15■□□□□ 0.98
NUP50-218ENST00000493456 GNASQ5JWF2 1037 aa21.15■□□□□ 0.98
NUP50-218ENST00000493456 FAM126BQ8IXS8 530 aa21.15■□□□□ 0.98
NUP50-218ENST00000493456 CPXCR1Q8N123 301 aa21.15■□□□□ 0.98
NUP50-218ENST00000493456 CHST13Q8NET6 341 aa21.15■□□□□ 0.98
NUP50-218ENST00000493456 PUS7LQ9H0K6 701 aaKnown RBP21.15■□□□□ 0.98
NUP50-218ENST00000493456 BCL11AQ9H165 835 aa21.15■□□□□ 0.98
NUP50-218ENST00000493456 MTIF3Q9H2K0 278 aaKnown RBP21.15■□□□□ 0.98
NUP50-218ENST00000493456 MKNK2Q9HBH9 465 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms