RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, human

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS36-205	ENST00000492650	GFOD1	Q9NXC2	390 aa		5.74	□□□□□ -1.49
VPS36-205	ENST00000492650	PCDHB12	Q9Y5F1	795 aa		5.74	□□□□□ -1.49
VPS36-205	ENST00000492650	TEX51	A0A1B0GUA7	166 aa		5.73	□□□□□ -1.49
VPS36-205	ENST00000492650	NOTO	A8MTQ0	251 aa		5.73	□□□□□ -1.49
VPS36-205	ENST00000492650	TNFRSF10C	O14798	259 aa		5.73	□□□□□ -1.49
VPS36-205	ENST00000492650	NRDC	O43847	1150 aa		5.73	□□□□□ -1.49
VPS36-205	ENST00000492650	ZNF16	P17020	682 aa	Predicted RBP	5.73	□□□□□ -1.49
VPS36-205	ENST00000492650	ZNF76	P36508	570 aa		5.73	□□□□□ -1.49
VPS36-205	ENST00000492650	RTP1	P59025	263 aa		5.73	□□□□□ -1.49
VPS36-205	ENST00000492650	BBS9	Q3SYG4	887 aa		5.73	□□□□□ -1.49
VPS36-205	ENST00000492650	AMIGO3	Q86WK7	504 aa		5.73	□□□□□ -1.49
VPS36-205	ENST00000492650	SLC9A7	Q96T83	725 aa		5.73	□□□□□ -1.49
VPS36-205	ENST00000492650	CNOT6	Q9ULM6	557 aa	Known RBP	5.73	□□□□□ -1.49
VPS36-205	ENST00000492650	MEIS3P2	A8K0S8	358 aa		5.72	□□□□□ -1.49
VPS36-205	ENST00000492650	EFEMP2	O95967	443 aa		5.72	□□□□□ -1.49
VPS36-205	ENST00000492650	AUH	Q13825	339 aa	Known RBP	5.72	□□□□□ -1.49
VPS36-205	ENST00000492650	TMCO4	Q5TGY1	634 aa		5.72	□□□□□ -1.49
VPS36-205	ENST00000492650	FBXW10	Q5XX13	1052 aa		5.72	□□□□□ -1.49
VPS36-205	ENST00000492650	USP48	Q86UV5	1035 aa		5.72	□□□□□ -1.49
VPS36-205	ENST00000492650	CCDC144CP	Q8IYA2	1237 aa		5.72	□□□□□ -1.49
VPS36-205	ENST00000492650	DHRS1	Q96LJ7	313 aa		5.72	□□□□□ -1.49
VPS36-205	ENST00000492650	FERD3L	Q96RJ6	166 aa		5.72	□□□□□ -1.49
VPS36-205	ENST00000492650	CDADC1	Q9BWV3	514 aa		5.72	□□□□□ -1.49
VPS36-205	ENST00000492650	BACH2	Q9BYV9	841 aa		5.72	□□□□□ -1.49
VPS36-205	ENST00000492650	SIRT5	Q9NXA8	310 aa		5.72	□□□□□ -1.49
VPS36-205	ENST00000492650	SDHB	P21912	280 aa		5.71	□□□□□ -1.5
VPS36-205	ENST00000492650	SRSF3	P84103	164 aa	Known RBP	5.71	□□□□□ -1.5
VPS36-205	ENST00000492650	LDLRAD1	Q5T700	205 aa		5.71	□□□□□ -1.5
VPS36-205	ENST00000492650	FCRL2	Q96LA5	508 aa	Predicted RBP	5.71	□□□□□ -1.5
VPS36-205	ENST00000492650	PLCD4	Q9BRC7	762 aa		5.71	□□□□□ -1.5
VPS36-205	ENST00000492650	DSCC1	Q9BVC3	393 aa		5.71	□□□□□ -1.5
VPS36-205	ENST00000492650	KRTAP4-2	Q9BYR5	136 aa		5.71	□□□□□ -1.5
VPS36-205	ENST00000492650	CRTAC1	Q9NQ79	661 aa		5.71	□□□□□ -1.5
VPS36-205	ENST00000492650	TNFRSF10D	Q9UBN6	386 aa		5.71	□□□□□ -1.5
VPS36-205	ENST00000492650	TAF6L	Q9Y6J9	622 aa		5.71	□□□□□ -1.5
VPS36-205	ENST00000492650	ZBTB7C	A1YPR0	619 aa		5.7	□□□□□ -1.5
VPS36-205	ENST00000492650	IMPDH2	P12268	514 aa		5.7	□□□□□ -1.5
VPS36-205	ENST00000492650	PNLIP	P16233	465 aa		5.7	□□□□□ -1.5
VPS36-205	ENST00000492650	ENDOU	P21128	410 aa	Known RBP	5.7	□□□□□ -1.5
VPS36-205	ENST00000492650	BMP8B	P34820	402 aa		5.7	□□□□□ -1.5
VPS36-205	ENST00000492650	ZNF394	Q53GI3	561 aa		5.7	□□□□□ -1.5
VPS36-205	ENST00000492650	ZNF385B	Q569K4	471 aa		5.7	□□□□□ -1.5
VPS36-205	ENST00000492650	INTS3	Q68E01	1043 aa	Known RBP	5.7	□□□□□ -1.5
VPS36-205	ENST00000492650	GALNT18	Q6P9A2	607 aa		5.7	□□□□□ -1.5
VPS36-205	ENST00000492650	C7orf61	Q8IZ16	206 aa		5.7	□□□□□ -1.5
VPS36-205	ENST00000492650	GCM1	Q9NP62	436 aa		5.7	□□□□□ -1.5
VPS36-205	ENST00000492650	SUCO	Q9UBS9	1254 aa	Known RBP	5.7	□□□□□ -1.5
VPS36-205	ENST00000492650	ZNRF3	Q9ULT6	936 aa		5.7	□□□□□ -1.5
VPS36-205	ENST00000492650	GPR55	Q9Y2T6	319 aa	Predicted RBP	5.7	□□□□□ -1.5
VPS36-205	ENST00000492650	KCTD3	Q9Y597	815 aa		5.7	□□□□□ -1.5
VPS36-205	ENST00000492650	PCDHGB7	Q9Y5F8	929 aa		5.7	□□□□□ -1.5
VPS36-205	ENST00000492650	WTIP	A6NIX2	430 aa	Predicted RBP	5.69	□□□□□ -1.5
VPS36-205	ENST00000492650	FADS2P1	A8MWK0	482 aa		5.69	□□□□□ -1.5
VPS36-205	ENST00000492650		C9IYK1	514 aa		5.69	□□□□□ -1.5
VPS36-205	ENST00000492650	RFXAP	O00287	272 aa		5.69	□□□□□ -1.5
VPS36-205	ENST00000492650	ZNF205	O95201	554 aa		5.69	□□□□□ -1.5
VPS36-205	ENST00000492650	INHBB	P09529	407 aa		5.69	□□□□□ -1.5
VPS36-205	ENST00000492650	ACR	P10323	421 aa		5.69	□□□□□ -1.5
VPS36-205	ENST00000492650	VAV1	P15498	845 aa		5.69	□□□□□ -1.5
VPS36-205	ENST00000492650	ARL4A	P40617	200 aa		5.69	□□□□□ -1.5
VPS36-205	ENST00000492650	CTSK	P43235	329 aa		5.69	□□□□□ -1.5
VPS36-205	ENST00000492650	KIR3DS1	Q14943	382 aa		5.69	□□□□□ -1.5
VPS36-205	ENST00000492650	HSF5	Q4G112	596 aa	Predicted RBP	5.69	□□□□□ -1.5
VPS36-205	ENST00000492650	NOL9	Q5SY16	702 aa	Known RBP	5.69	□□□□□ -1.5
VPS36-205	ENST00000492650	TDRD10	Q5VZ19	366 aa	Known RBP	5.69	□□□□□ -1.5
VPS36-205	ENST00000492650	CWF19L1	Q69YN2	538 aa	Known RBP	5.69	□□□□□ -1.5
VPS36-205	ENST00000492650	LILRA6	Q6PI73	481 aa		5.69	□□□□□ -1.5
VPS36-205	ENST00000492650	CRTC3	Q6UUV7	619 aa		5.69	□□□□□ -1.5
VPS36-205	ENST00000492650	AP5S1	Q9NUS5	200 aa		5.69	□□□□□ -1.5
VPS36-205	ENST00000492650	ERVK13-1	Q9NX77	482 aa		5.69	□□□□□ -1.5
VPS36-205	ENST00000492650		A0A1W2PQ27	194 aa		5.68	□□□□□ -1.5
VPS36-205	ENST00000492650		A0A1W2PQ64	194 aa		5.68	□□□□□ -1.5
VPS36-205	ENST00000492650		A0A1W2PQC6	194 aa		5.68	□□□□□ -1.5
VPS36-205	ENST00000492650		A0A1W2PQD8	194 aa		5.68	□□□□□ -1.5
VPS36-205	ENST00000492650	TP53	P04637	393 aa	Predicted RBP	5.68	□□□□□ -1.5
VPS36-205	ENST00000492650	MPO	P05164	745 aa		5.68	□□□□□ -1.5
VPS36-205	ENST00000492650	GSN	P06396	782 aa		5.68	□□□□□ -1.5
VPS36-205	ENST00000492650	PRKCA	P17252	672 aa		5.68	□□□□□ -1.5
VPS36-205	ENST00000492650	VIPR1	P32241	457 aa		5.68	□□□□□ -1.5
VPS36-205	ENST00000492650	OLFML2B	Q68BL8	750 aa		5.68	□□□□□ -1.5
VPS36-205	ENST00000492650	NAT16	Q8N8M0	369 aa		5.68	□□□□□ -1.5
VPS36-205	ENST00000492650	RNF34	Q969K3	372 aa		5.68	□□□□□ -1.5
VPS36-205	ENST00000492650	METTL5	Q9NRN9	209 aa	Known RBP	5.68	□□□□□ -1.5
VPS36-205	ENST00000492650	FAM86C1	Q9NVL1	165 aa		5.68	□□□□□ -1.5
VPS36-205	ENST00000492650	MBD1	Q9UIS9	605 aa	Predicted RBP	5.68	□□□□□ -1.5
VPS36-205	ENST00000492650		A0A1W2PQ45	241 aa	Predicted RBP	5.67	□□□□□ -1.5
VPS36-205	ENST00000492650		A0A1W2PQY0	241 aa		5.67	□□□□□ -1.5
VPS36-205	ENST00000492650	GSTM1	P09488	218 aa		5.67	□□□□□ -1.5
VPS36-205	ENST00000492650	BMP7	P18075	431 aa		5.67	□□□□□ -1.5
VPS36-205	ENST00000492650	PMS1	P54277	932 aa	Known RBP	5.67	□□□□□ -1.5
VPS36-205	ENST00000492650	CYP4F8	P98187	520 aa		5.67	□□□□□ -1.5
VPS36-205	ENST00000492650	FANCC	Q00597	558 aa		5.67	□□□□□ -1.5
VPS36-205	ENST00000492650	LAPTM5	Q13571	262 aa		5.67	□□□□□ -1.5
VPS36-205	ENST00000492650	TCERG1L	Q5VWI1	586 aa		5.67	□□□□□ -1.5
VPS36-205	ENST00000492650	DCAF15	Q66K64	600 aa		5.67	□□□□□ -1.5
VPS36-205	ENST00000492650	TTLL10	Q6ZVT0	673 aa		5.67	□□□□□ -1.5
VPS36-205	ENST00000492650	NUP43	Q8NFH3	380 aa		5.67	□□□□□ -1.5
VPS36-205	ENST00000492650	TM9SF2	Q99805	663 aa		5.67	□□□□□ -1.5
VPS36-205	ENST00000492650	PRR13	Q9NZ81	148 aa		5.67	□□□□□ -1.5
VPS36-205	ENST00000492650	PPT2	Q9UMR5	302 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms