RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 TNFRSF10AO00220 468 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 SPTLC2O15270 562 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 TPM3P06753 285 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 ME1P48163 572 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 FAM160A1Q05DH4 1040 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 NTRK3Q16288 839 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 MYSM1Q5VVJ2 828 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 KRT40Q6A162 431 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 KANK3Q6NY19 840 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 SASS6Q6UVJ0 657 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 TRIM67Q6ZTA4 783 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 C16orf86Q6ZW13 317 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 CHST3Q7LGC8 479 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 ADGRA1Q86SQ6 560 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 FERMT3Q86UX7 667 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 CRACR2BQ8N4Y2 399 aaPredicted RBP7.32□□□□□ -1.24
SF3A3-208ENST00000489537 MRPS27Q92552 414 aaKnown RBP7.32□□□□□ -1.24
SF3A3-208ENST00000489537 THAP11Q96EK4 314 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 TIGD1Q96MW7 591 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 PSMD1Q99460 953 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 SLC26A6Q9BXS9 759 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 GLT8D2Q9H1C3 349 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 EHD4Q9H223 541 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 TNMDQ9H2S6 317 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 NCOA5Q9HCD5 579 aaKnown RBP7.32□□□□□ -1.24
SF3A3-208ENST00000489537 MKRN1Q9UHC7 482 aaKnown RBP7.32□□□□□ -1.24
SF3A3-208ENST00000489537 SERPINA10Q9UK55 444 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 HDAC9Q9UKV0 1011 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 SYNPO2Q9UMS6 1093 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 A0A1B0GUL6 1792 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 TAF1P21675 1872 aa7.32□□□□□ -1.24
SF3A3-208ENST00000489537 SYCE3A1L190 88 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 USP17L3A6NCW0 530 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 USP17L4A6NCW7 530 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 LRRC37AA6NMS7 1700 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 LCE2BO14633 110 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 MMP1P03956 469 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 FDPSP14324 419 aaKnown RBP7.31□□□□□ -1.24
SF3A3-208ENST00000489537 CD46P15529 392 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 ADD1P35611 737 aaKnown RBP7.31□□□□□ -1.24
SF3A3-208ENST00000489537 USP46P62068 366 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 DYNLL1P63167 89 aaKnown RBP7.31□□□□□ -1.24
SF3A3-208ENST00000489537 GTF2IP78347 998 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 MDM2Q00987 491 aaPredicted RBP7.31□□□□□ -1.24
SF3A3-208ENST00000489537 KIF23Q02241 960 aaPredicted RBP7.31□□□□□ -1.24
SF3A3-208ENST00000489537 FMR1Q06787 632 aaKnown RBP eCLIP7.31□□□□□ -1.24
SF3A3-208ENST00000489537 ORC2Q13416 577 aaPredicted RBP7.31□□□□□ -1.24
SF3A3-208ENST00000489537 LTBP1Q14766 1721 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 SLC39A14Q15043 492 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 MSS51Q4VC12 460 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 CCDC93Q567U6 631 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 ANO1Q5XXA6 986 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 MCTP2Q6DN12 878 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 BRICD5Q6PL45 260 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 USP17L1Q7RTZ2 530 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 TXNRD3Q86VQ6 643 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 NOSTRINQ8IVI9 506 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 ENAHQ8N8S7 591 aaPredicted RBP7.31□□□□□ -1.24
SF3A3-208ENST00000489537 NEDD1Q8NHV4 660 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 NUP133Q8WUM0 1156 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 ZDHHC15Q96MV8 337 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 TRIM34Q9BYJ4 488 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 GTPBP4Q9BZE4 634 aaKnown RBP7.31□□□□□ -1.24
SF3A3-208ENST00000489537 TAOK3Q9H2K8 898 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 TMOD2Q9NZR1 351 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 TMEM63CQ9P1W3 806 aa7.31□□□□□ -1.24
SF3A3-208ENST00000489537 LTBP3Q9NS15 1303 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 GOLGA6L6A8MZA4 724 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 MYO1BO43795 1136 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 GDF9O60383 454 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 CUTAO60888 179 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 TOP1P11387 765 aaKnown RBP7.3□□□□□ -1.24
SF3A3-208ENST00000489537 XRCC6P12956 609 aaKnown RBP eCLIP7.3□□□□□ -1.24
SF3A3-208ENST00000489537 VEGFAP15692 232 aaPredicted RBP7.3□□□□□ -1.24
SF3A3-208ENST00000489537 CMA1P23946 247 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 KLRK1P26718 216 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 KRT2P35908 639 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 TPM4P67936 248 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 TFAP4Q01664 338 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 KIAA2012Q0VF49 1180 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 TROAPQ12815 778 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 FOXC1Q12948 553 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 SEMA3FQ13275 785 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 FOXD4L6Q3SYB3 417 aaPredicted RBP7.3□□□□□ -1.24
SF3A3-208ENST00000489537 PLA2G2CQ5R387 149 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 RCSD1Q6JBY9 416 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 FOXD4L3Q6VB84 417 aaPredicted RBP7.3□□□□□ -1.24
SF3A3-208ENST00000489537 TMTC3Q6ZXV5 915 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 FOXP4Q8IVH2 680 aaPredicted RBP7.3□□□□□ -1.24
SF3A3-208ENST00000489537 LINC00301Q8NCQ3 95 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 TGFBRAP1Q8WUH2 860 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 FERMT2Q96AC1 680 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 CLSTN2Q9H4D0 955 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 FAM13BQ9NYF5 915 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 USP25Q9UHP3 1055 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 SERPINB13Q9UIV8 391 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 TTF2Q9UNY4 1162 aaKnown RBP7.3□□□□□ -1.24
SF3A3-208ENST00000489537 MYH13Q9UKX3 1938 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 PLIN4Q96Q06 1357 aa7.3□□□□□ -1.24
SF3A3-208ENST00000489537 FLT1P17948 1338 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms