RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 ADGRF4Q8IZF3 695 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 OXER1Q8TDS5 423 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 CCDC12Q8WUD4 166 aaPredicted RBP7.96□□□□□ -1.14
PDAP1-203ENST00000488214 LEO1Q8WVC0 666 aaPredicted RBP7.96□□□□□ -1.14
PDAP1-203ENST00000488214 ZKSCAN4Q969J2 545 aaPredicted RBP7.96□□□□□ -1.14
PDAP1-203ENST00000488214 CDCA5Q96FF9 252 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 SPATA32Q96LK8 384 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 USP28Q96RU2 1077 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 PHF20Q9BVI0 1012 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 TAF1DQ9H5J8 278 aaPredicted RBP7.96□□□□□ -1.14
PDAP1-203ENST00000488214 RIOX1Q9H6W3 641 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 VCPKMTQ9H867 229 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 PICK1Q9NRD5 415 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 GINM1Q9NU53 330 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 LMBRD1Q9NUN5 540 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 TMX2Q9Y320 296 aa7.96□□□□□ -1.14
PDAP1-203ENST00000488214 DDX49Q9Y6V7 483 aaKnown RBP7.96□□□□□ -1.14
PDAP1-203ENST00000488214 RLFQ13129 1914 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 FAM205CA6NFA0 338 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 DCAF8L1A6NGE4 600 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 USP17L10C9JJH3 530 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 TMEM232C9JQI7 657 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 hCG_1984214I3L0E3 225 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 ZBTB5O15062 677 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 TRAK2O60296 914 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 MBD3O95983 291 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 VEGFAP15692 232 aaPredicted RBP7.95□□□□□ -1.14
PDAP1-203ENST00000488214 U2AF2P26368 475 aaKnown RBP eCLIP7.95□□□□□ -1.14
PDAP1-203ENST00000488214 CALML3P27482 149 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 SMARCA1P28370 1054 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 NF2P35240 595 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 DGKZQ13574 1117 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 MTMR2Q13614 643 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 TTLL12Q14166 644 aaPredicted RBP7.95□□□□□ -1.14
PDAP1-203ENST00000488214 STK38Q15208 465 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 KIAA1755Q5JYT7 1200 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 PPP1R18Q6NYC8 613 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 SAMD1Q6SPF0 538 aaPredicted RBP7.95□□□□□ -1.14
PDAP1-203ENST00000488214 ZNF713Q8N859 430 aaPredicted RBP7.95□□□□□ -1.14
PDAP1-203ENST00000488214 ZC3H15Q8WU90 426 aaKnown RBP7.95□□□□□ -1.14
PDAP1-203ENST00000488214 SCAND2PQ9GZW5 306 aaPredicted RBP7.95□□□□□ -1.14
PDAP1-203ENST00000488214 FOXP1Q9H334 677 aaPredicted RBP7.95□□□□□ -1.14
PDAP1-203ENST00000488214 JMJD4Q9H9V9 463 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 AS3MTQ9HBK9 375 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 SH3GLB2Q9NR46 395 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 BARHL2Q9NY43 387 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 TFIP11Q9UBB9 837 aaKnown RBP7.95□□□□□ -1.14
PDAP1-203ENST00000488214 CFAP45Q9UL16 551 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 CLEC11AQ9Y240 323 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 ELP1O95163 1332 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 SMCHD1A6NHR9 2005 aa7.95□□□□□ -1.14
PDAP1-203ENST00000488214 PNMA6FA0A0J9YX94 578 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 TRIM75PA6NK02 468 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 PPP1R12BO60237 982 aaPredicted RBP7.94□□□□□ -1.14
PDAP1-203ENST00000488214 PPP1R11O60927 126 aaPredicted RBP7.94□□□□□ -1.14
PDAP1-203ENST00000488214 GADD45BO75293 160 aaPredicted RBP7.94□□□□□ -1.14
PDAP1-203ENST00000488214 POTEIP0CG38 1075 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 POTEJP0CG39 1038 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 ATP2B1P20020 1258 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 IREB2P48200 963 aaKnown RBP7.94□□□□□ -1.14
PDAP1-203ENST00000488214 ADCY7P51828 1080 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 STAT2P52630 851 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 SNAP25P60880 206 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 VGLL4Q14135 290 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 NPY5RQ15761 445 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 QRICH1Q2TAL8 776 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 SKOR2Q2VWA4 1001 aaPredicted RBP7.94□□□□□ -1.14
PDAP1-203ENST00000488214 NOL9Q5SY16 702 aaKnown RBP7.94□□□□□ -1.14
PDAP1-203ENST00000488214 ATL3Q6DD88 541 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 PIK3AP1Q6ZUJ8 805 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 PNMA8AQ86V59 439 aaPredicted RBP7.94□□□□□ -1.14
PDAP1-203ENST00000488214 BLIDQ8IZY5 108 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 DAGLBQ8NCG7 672 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.94□□□□□ -1.143e-12■□□□□ 10.8
PDAP1-203ENST00000488214 BICD2Q8TD16 824 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 RASGRP4Q8TDF6 673 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 KLRG1Q96E93 195 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 TANGO6Q9C0B7 1094 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 GZF1Q9H116 711 aaPredicted RBP7.94□□□□□ -1.14
PDAP1-203ENST00000488214 ZNF112Q9UJU3 913 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 NOL7Q9UMY1 257 aaKnown RBP7.94□□□□□ -1.14
PDAP1-203ENST00000488214 PCDHA4Q9UN74 947 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 CSADQ9Y600 493 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 CLIC4Q9Y696 253 aa7.94□□□□□ -1.14
PDAP1-203ENST00000488214 CCDC194A0A1B0GVG4 234 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 GOLGA6L4A6NEF3 574 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 POTECB2RU33 542 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 ADAMTS3O15072 1205 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 WDR46O15213 610 aaKnown RBP7.93□□□□□ -1.14
PDAP1-203ENST00000488214 TAL1P17542 331 aaPredicted RBP7.93□□□□□ -1.14
PDAP1-203ENST00000488214 PTPRAP18433 802 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 VCAM1P19320 739 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 HOXD11P31277 338 aaPredicted RBP7.93□□□□□ -1.14
PDAP1-203ENST00000488214 ME1P48163 572 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 NASPP49321 788 aaPredicted RBP7.93□□□□□ -1.14
PDAP1-203ENST00000488214 USP14P54578 494 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 HMGCS2P54868 508 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 UBE2HP62256 183 aa7.93□□□□□ -1.14
PDAP1-203ENST00000488214 SF3A1Q15459 793 aaKnown RBP7.93□□□□□ -1.14
PDAP1-203ENST00000488214 KLHL40Q2TBA0 621 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms