RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 SLC51AQ86UW1 340 aa29.55■■■□□ 2.32
HLA-C-208ENST00000487245 NEDD1Q8NHV4 660 aa29.55■■■□□ 2.32
HLA-C-208ENST00000487245 TBC1D16Q8TBP0 767 aa29.55■■■□□ 2.32
HLA-C-208ENST00000487245 NAA15Q9BXJ9 866 aaKnown RBP29.55■■■□□ 2.32
HLA-C-208ENST00000487245 SAP30BPQ9UHR5 308 aaKnown RBP29.55■■■□□ 2.32
HLA-C-208ENST00000487245 PARP3Q9Y6F1 533 aa29.55■■■□□ 2.32
HLA-C-208ENST00000487245 FANCGO15287 622 aa29.55■■■□□ 2.32
HLA-C-208ENST00000487245 VEGFAP15692 232 aaPredicted RBP29.55■■■□□ 2.32
HLA-C-208ENST00000487245 PTPN21Q16825 1174 aa29.55■■■□□ 2.32
HLA-C-208ENST00000487245 HSP90AA4PQ58FG1 418 aa29.55■■■□□ 2.32
HLA-C-208ENST00000487245 ADD3Q9UEY8 706 aaKnown RBP29.55■■■□□ 2.32
HLA-C-208ENST00000487245 GAKO14976 1311 aa29.54■■■□□ 2.32
HLA-C-208ENST00000487245 FAM205AQ6ZU69 1335 aa29.54■■■□□ 2.32
HLA-C-208ENST00000487245 AKR1B15C9JRZ8 316 aaPredicted RBP29.54■■■□□ 2.32
HLA-C-208ENST00000487245 TXLNAP40222 546 aa29.54■■■□□ 2.32
HLA-C-208ENST00000487245 EYA3Q99504 573 aa29.54■■■□□ 2.32
HLA-C-208ENST00000487245 CCDC194A0A1B0GVG4 234 aa29.53■■■□□ 2.32
HLA-C-208ENST00000487245 M0R2N6 131 aa29.53■■■□□ 2.32
HLA-C-208ENST00000487245 SMARCA1P28370 1054 aa29.53■■■□□ 2.32
HLA-C-208ENST00000487245 ADKP55263 362 aaKnown RBP29.53■■■□□ 2.32
HLA-C-208ENST00000487245 MFSD14BQ5SR56 506 aa29.53■■■□□ 2.32
HLA-C-208ENST00000487245 KRT222Q8N1A0 295 aa29.53■■■□□ 2.32
HLA-C-208ENST00000487245 C4orf32Q8N8J7 132 aa29.53■■■□□ 2.32
HLA-C-208ENST00000487245 LRRN4CLQ8ND94 238 aa29.53■■■□□ 2.32
HLA-C-208ENST00000487245 SPZ1Q9BXG8 430 aa29.53■■■□□ 2.32
HLA-C-208ENST00000487245 BARHL2Q9NY43 387 aa29.53■■■□□ 2.32
HLA-C-208ENST00000487245 CDK5RAP2Q96SN8 1893 aa29.53■■■□□ 2.32
HLA-C-208ENST00000487245 TPM1P09493 284 aa29.53■■■□□ 2.32
HLA-C-208ENST00000487245 PDXDC2PQ6P474 469 aa29.53■■■□□ 2.32
HLA-C-208ENST00000487245 SLC44A5Q8NCS7 719 aa29.53■■■□□ 2.32
HLA-C-208ENST00000487245 GPKOWQ92917 476 aaPredicted RBP eCLIP29.53■■■□□ 2.32
HLA-C-208ENST00000487245 STX8Q9UNK0 236 aa29.53■■■□□ 2.32
HLA-C-208ENST00000487245 ITIH6Q6UXX5 1313 aa29.52■■■□□ 2.32
HLA-C-208ENST00000487245 BAZ2BQ9UIF8 2168 aaKnown RBP29.52■■■□□ 2.32
HLA-C-208ENST00000487245 GTPBP6O43824 516 aaPredicted RBP29.52■■■□□ 2.32
HLA-C-208ENST00000487245 TADA3O75528 432 aa29.52■■■□□ 2.32
HLA-C-208ENST00000487245 SP8Q8IXZ3 490 aa29.52■■■□□ 2.32
HLA-C-208ENST00000487245 CCDC12Q8WUD4 166 aaPredicted RBP29.52■■■□□ 2.32
HLA-C-208ENST00000487245 POLLQ9UGP5 575 aa29.52■■■□□ 2.32
HLA-C-208ENST00000487245 SUGT1Q9Y2Z0 365 aa29.52■■■□□ 2.32
HLA-C-208ENST00000487245 FLT1P17948 1338 aa29.52■■■□□ 2.32
HLA-C-208ENST00000487245 EFCAB8A8MWE9 144 aa29.51■■■□□ 2.31
HLA-C-208ENST00000487245 RHBDL3P58872 404 aa29.51■■■□□ 2.31
HLA-C-208ENST00000487245 FILIP1LQ4L180 1135 aa29.51■■■□□ 2.31
HLA-C-208ENST00000487245 TOGARAM2Q6ZUX3 1019 aa29.51■■■□□ 2.31
HLA-C-208ENST00000487245 DDX60LQ5H9U9 1706 aaKnown RBP29.51■■■□□ 2.31
HLA-C-208ENST00000487245 STXBP3O00186 592 aa29.51■■■□□ 2.31
HLA-C-208ENST00000487245 POLRMTO00411 1230 aaKnown RBP29.51■■■□□ 2.31
HLA-C-208ENST00000487245 LAD1O00515 517 aa29.51■■■□□ 2.31
HLA-C-208ENST00000487245 URI1O94763 535 aaPredicted RBP29.51■■■□□ 2.31
HLA-C-208ENST00000487245 FECHP22830 423 aa29.51■■■□□ 2.31
HLA-C-208ENST00000487245 WWC2Q6AWC2 1192 aa29.51■■■□□ 2.31
HLA-C-208ENST00000487245 CCDC51Q96ER9 411 aa29.51■■■□□ 2.31
HLA-C-208ENST00000487245 C6orf229H3BNL8 230 aa29.5■■■□□ 2.31
HLA-C-208ENST00000487245 CASQ1P31415 396 aa29.5■■■□□ 2.31
HLA-C-208ENST00000487245 MAP3K9P80192 1104 aa29.5■■■□□ 2.31
HLA-C-208ENST00000487245 IL17AQ16552 155 aa29.5■■■□□ 2.31
HLA-C-208ENST00000487245 UBXN4Q92575 508 aa29.5■■■□□ 2.31
HLA-C-208ENST00000487245 RMND1Q9NWS8 449 aa29.5■■■□□ 2.31
HLA-C-208ENST00000487245 PCDHA6Q9UN73 950 aa29.5■■■□□ 2.31
HLA-C-208ENST00000487245 PCDHA8Q9Y5H6 950 aa29.5■■■□□ 2.31
HLA-C-208ENST00000487245 KLRF2D3W0D1 207 aa29.49■■■□□ 2.31
HLA-C-208ENST00000487245 TEX33O43247 280 aa29.49■■■□□ 2.31
HLA-C-208ENST00000487245 DDR1Q08345 913 aa29.49■■■□□ 2.31
HLA-C-208ENST00000487245 HEATR3Q7Z4Q2 680 aa29.49■■■□□ 2.31
HLA-C-208ENST00000487245 MNS1Q8NEH6 495 aa29.49■■■□□ 2.31
HLA-C-208ENST00000487245 ZNF446Q9NWS9 450 aa29.49■■■□□ 2.31
HLA-C-208ENST00000487245 LIMA1Q9UHB6 759 aaKnown RBP29.49■■■□□ 2.31
HLA-C-208ENST00000487245 SNED1Q8TER0 1413 aa29.49■■■□□ 2.31
HLA-C-208ENST00000487245 LRRC10BA6NIK2 292 aa29.48■■■□□ 2.31
HLA-C-208ENST00000487245 CYTH3O43739 400 aa29.48■■■□□ 2.31
HLA-C-208ENST00000487245 PARP1P09874 1014 aaKnown RBP29.48■■■□□ 2.31
HLA-C-208ENST00000487245 PPFIBP1Q86W92 1011 aa29.48■■■□□ 2.31
HLA-C-208ENST00000487245 IGSF22Q8N9C0 903 aa29.48■■■□□ 2.31
HLA-C-208ENST00000487245 RWDD2AQ9UIY3 292 aa29.48■■■□□ 2.31
HLA-C-208ENST00000487245 LRRC37AA6NMS7 1700 aa29.48■■■□□ 2.31
HLA-C-208ENST00000487245 NOVP48745 357 aa29.48■■■□□ 2.31
HLA-C-208ENST00000487245 ARHGAP29Q52LW3 1261 aa29.48■■■□□ 2.31
HLA-C-208ENST00000487245 DTHD1Q6ZMT9 781 aa29.48■■■□□ 2.31
HLA-C-208ENST00000487245 KIFC2Q96AC6 838 aa29.48■■■□□ 2.31
HLA-C-208ENST00000487245 COA1Q9GZY4 146 aa29.48■■■□□ 2.31
HLA-C-208ENST00000487245 ADAMTS3O15072 1205 aa29.47■■■□□ 2.31
HLA-C-208ENST00000487245 CCDC175P0C221 793 aa29.47■■■□□ 2.31
HLA-C-208ENST00000487245 CASP1P29466 404 aa29.47■■■□□ 2.31
HLA-C-208ENST00000487245 GNG11P61952 73 aa29.47■■■□□ 2.31
HLA-C-208ENST00000487245 SPAG1Q07617 926 aa29.47■■■□□ 2.31
HLA-C-208ENST00000487245 BMS1Q14692 1282 aaKnown RBP29.47■■■□□ 2.31
HLA-C-208ENST00000487245 SLC35G1Q2M3R5 365 aa29.47■■■□□ 2.31
HLA-C-208ENST00000487245 KLHL10Q6JEL2 608 aa29.47■■■□□ 2.31
HLA-C-208ENST00000487245 MYH1P12882 1939 aa29.46■■■□□ 2.31
HLA-C-208ENST00000487245 PPEF1O14829 653 aaPredicted RBP29.46■■■□□ 2.31
HLA-C-208ENST00000487245 PRPHP41219 470 aa29.46■■■□□ 2.31
HLA-C-208ENST00000487245 SEMA3FQ13275 785 aa29.46■■■□□ 2.31
HLA-C-208ENST00000487245 TYW1BQ6NUM6 668 aa29.46■■■□□ 2.31
HLA-C-208ENST00000487245 STX17P56962 302 aa29.46■■■□□ 2.31
HLA-C-208ENST00000487245 KRT25Q7Z3Z0 450 aa29.46■■■□□ 2.31
HLA-C-208ENST00000487245 WDR24Q96S15 920 aa29.46■■■□□ 2.31
HLA-C-208ENST00000487245 ZMYND12Q9H0C1 365 aa29.46■■■□□ 2.31
HLA-C-208ENST00000487245 ARGLU1Q9NWB6 273 aaPredicted RBP29.46■■■□□ 2.31
HLA-C-208ENST00000487245 MRFAP1Q9Y605 127 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms