RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 MYL10Q9BUA6 226 aa13.28□□□□□ -0.28
NUP50-216ENST00000486184 PPP1R9AQ9ULJ8 1098 aa13.28□□□□□ -0.28
NUP50-216ENST00000486184 SPDYE16A6NNV3 312 aaPredicted RBP13.27□□□□□ -0.29
NUP50-216ENST00000486184 ZBED4O75132 1171 aa13.27□□□□□ -0.29
NUP50-216ENST00000486184 SNHG28P0DPA3 235 aa13.27□□□□□ -0.29
NUP50-216ENST00000486184 GRM4Q14833 912 aa13.27□□□□□ -0.29
NUP50-216ENST00000486184 APOA5Q6Q788 366 aa13.27□□□□□ -0.29
NUP50-216ENST00000486184 CCAR1Q8IX12 1150 aaKnown RBP13.27□□□□□ -0.29
NUP50-216ENST00000486184 FBXL16Q8N461 479 aa13.27□□□□□ -0.29
NUP50-216ENST00000486184 MB21D1Q8N884 522 aa13.27□□□□□ -0.29
NUP50-216ENST00000486184 SPDYE1Q8NFV5 336 aaPredicted RBP13.27□□□□□ -0.29
NUP50-216ENST00000486184 MAP3K14Q99558 947 aa13.27□□□□□ -0.29
NUP50-216ENST00000486184 CFHR5Q9BXR6 569 aa13.27□□□□□ -0.29
NUP50-216ENST00000486184 FBXO28Q9NVF7 368 aa13.27□□□□□ -0.29
NUP50-216ENST00000486184 CPA4Q9UI42 421 aa13.27□□□□□ -0.29
NUP50-216ENST00000486184 GOLGA8AA7E2F4 631 aa13.26□□□□□ -0.29
NUP50-216ENST00000486184 ST18O60284 1047 aa13.26□□□□□ -0.29
NUP50-216ENST00000486184 PLA2G6O60733 806 aa13.26□□□□□ -0.29
NUP50-216ENST00000486184 HSPA1AP0DMV8 641 aaKnown RBP13.26□□□□□ -0.29
NUP50-216ENST00000486184 HSPA1BP0DMV9 641 aaKnown RBP13.26□□□□□ -0.29
NUP50-216ENST00000486184 FDX1P10109 184 aa13.26□□□□□ -0.29
NUP50-216ENST00000486184 RXRAP19793 462 aa13.26□□□□□ -0.29
NUP50-216ENST00000486184 SLC16A2P36021 539 aa13.26□□□□□ -0.29
NUP50-216ENST00000486184 GNAQP50148 359 aa13.26□□□□□ -0.29
NUP50-216ENST00000486184 METAP2P50579 478 aaKnown RBP eCLIP13.26□□□□□ -0.29
NUP50-216ENST00000486184 TROAPQ12815 778 aa13.26□□□□□ -0.29
NUP50-216ENST00000486184 PLS1Q14651 629 aa13.26□□□□□ -0.29
NUP50-216ENST00000486184 KIF22Q14807 665 aa13.26□□□□□ -0.29
NUP50-216ENST00000486184 SYDE2Q5VT97 1194 aa13.26□□□□□ -0.29
NUP50-216ENST00000486184 RAB11FIP4Q86YS3 637 aa13.26□□□□□ -0.29
NUP50-216ENST00000486184 CCDC144CPQ8IYA2 1237 aa13.26□□□□□ -0.29
NUP50-216ENST00000486184 ANKRD13CQ8N6S4 541 aa13.26□□□□□ -0.29
NUP50-216ENST00000486184 IL27Q8NEV9 243 aa13.26□□□□□ -0.29
NUP50-216ENST00000486184 ATG4CQ96DT6 458 aa13.26□□□□□ -0.29
NUP50-216ENST00000486184 CWC22Q9HCG8 908 aaKnown RBP13.26□□□□□ -0.29
NUP50-216ENST00000486184 RBM28Q9NW13 759 aaKnown RBP13.26□□□□□ -0.29
NUP50-216ENST00000486184 TSKSQ9UJT2 592 aa13.26□□□□□ -0.29
NUP50-216ENST00000486184 RABGAP1Q9Y3P9 1069 aa13.26□□□□□ -0.29
NUP50-216ENST00000486184 PLXNB2O15031 1838 aa13.25□□□□□ -0.29
NUP50-216ENST00000486184 RBBP6Q7Z6E9 1792 aaKnown RBP13.25□□□□□ -0.29
NUP50-216ENST00000486184 ADGRA2Q96PE1 1338 aa13.25□□□□□ -0.29
NUP50-216ENST00000486184 CCDC196A0A1B0GTZ2 297 aa13.25□□□□□ -0.29
NUP50-216ENST00000486184 KLRF2D3W0D1 207 aa13.25□□□□□ -0.29
NUP50-216ENST00000486184 RCAN1P53805 252 aa13.25□□□□□ -0.29
NUP50-216ENST00000486184 AK2P54819 239 aa13.25□□□□□ -0.29
NUP50-216ENST00000486184 CCNA1P78396 465 aa13.25□□□□□ -0.29
NUP50-216ENST00000486184 TOB2Q14106 344 aaPredicted RBP13.25□□□□□ -0.29
NUP50-216ENST00000486184 RTN1Q16799 776 aa13.25□□□□□ -0.29
NUP50-216ENST00000486184 FAM110CQ1W6H9 321 aa13.25□□□□□ -0.29
NUP50-216ENST00000486184 TTBK2Q6IQ55 1244 aa13.25□□□□□ -0.29
NUP50-216ENST00000486184 LBX2Q6XYB7 198 aa13.25□□□□□ -0.29
NUP50-216ENST00000486184 NOL8Q76FK4 1167 aaKnown RBP13.25□□□□□ -0.29
NUP50-216ENST00000486184 FANCBQ8NB91 859 aa13.25□□□□□ -0.29
NUP50-216ENST00000486184 GPRC5AQ8NFJ5 357 aa13.25□□□□□ -0.29
NUP50-216ENST00000486184 LZTS2Q9BRK4 669 aa13.25□□□□□ -0.29
NUP50-216ENST00000486184 AGXT2Q9BYV1 514 aa13.25□□□□□ -0.29
NUP50-216ENST00000486184 ALDH8A1Q9H2A2 487 aaPredicted RBP13.25□□□□□ -0.29
NUP50-216ENST00000486184 MAD2L2Q9UI95 211 aa13.25□□□□□ -0.29
NUP50-216ENST00000486184 BRPF3Q9ULD4 1205 aa13.25□□□□□ -0.29
NUP50-216ENST00000486184 PRR12Q9ULL5 1215 aa13.25□□□□□ -0.29
NUP50-216ENST00000486184 PALM3A6NDB9 673 aaPredicted RBP13.24□□□□□ -0.29
NUP50-216ENST00000486184 GPR25O00155 361 aa13.24□□□□□ -0.29
NUP50-216ENST00000486184 VWA5AO00534 786 aa13.24□□□□□ -0.29
NUP50-216ENST00000486184 SLC4A3P48751 1232 aa13.24□□□□□ -0.29
NUP50-216ENST00000486184 CTCFP49711 727 aaPredicted RBP13.24□□□□□ -0.29
NUP50-216ENST00000486184 ERVK-9P63128 1117 aa13.24□□□□□ -0.29
NUP50-216ENST00000486184 ERVK-24P63145 666 aa13.24□□□□□ -0.29
NUP50-216ENST00000486184 PPP2R5BQ15173 497 aa13.24□□□□□ -0.29
NUP50-216ENST00000486184 BTNL9Q6UXG8 535 aa13.24□□□□□ -0.29
NUP50-216ENST00000486184 STAG2Q8N3U4 1231 aa13.24□□□□□ -0.29
NUP50-216ENST00000486184 UBA5Q9GZZ9 404 aa13.24□□□□□ -0.29
NUP50-216ENST00000486184 CASP8AP2Q9UKL3 1982 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 BAZ2BQ9UIF8 2168 aaKnown RBP13.23□□□□□ -0.29
NUP50-216ENST00000486184 FOXN1O15353 648 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 FKTNO75072 461 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 BCRP11274 1271 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 SP3Q02447 781 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 STK3Q13188 491 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 ARHGEF6Q15052 776 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 WDR78Q5VTH9 848 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 CCDC174Q6PII3 467 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 CPLX2Q6PUV4 134 aaKnown RBP13.23□□□□□ -0.29
NUP50-216ENST00000486184 C17orf99Q6UX52 265 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 ADGRF4Q8IZF3 695 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 CPXCR1Q8N123 301 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 ZNF274Q96GC6 653 aaPredicted RBP13.23□□□□□ -0.29
NUP50-216ENST00000486184 ERO1AQ96HE7 468 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 KIF2CQ99661 725 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 LARP6Q9BRS8 491 aaKnown RBP13.23□□□□□ -0.29
NUP50-216ENST00000486184 SLKQ9H2G2 1235 aaPredicted RBP13.23□□□□□ -0.29
NUP50-216ENST00000486184 R3HDMLQ9H3Y0 253 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 SLC38A10Q9HBR0 1119 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 VAT1LQ9HCJ6 419 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 RBPJLQ9UBG7 517 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 MORF4L1Q9UBU8 362 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 SEC63Q9UGP8 760 aaKnown RBP13.23□□□□□ -0.29
NUP50-216ENST00000486184 PNMA2Q9UL42 364 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 ZSWIM8A7E2V4 1837 aa13.23□□□□□ -0.29
NUP50-216ENST00000486184 ZNFX1Q9P2E3 1918 aaKnown RBP13.22□□□□□ -0.29
NUP50-216ENST00000486184 CPLX1O14810 134 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms