RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 SBF1O95248 1867 aa16.1■□□□□ 0.17
CLK3-204ENST00000483723 A0A1B0GVL5 298 aa16.1■□□□□ 0.17
CLK3-204ENST00000483723 EGFRP00533 1210 aa16.1■□□□□ 0.17
CLK3-204ENST00000483723 TNNI2P48788 182 aa16.1■□□□□ 0.17
CLK3-204ENST00000483723 NDUFA8P51970 172 aa16.1■□□□□ 0.17
CLK3-204ENST00000483723 ATP2B2Q01814 1243 aa16.1■□□□□ 0.17
CLK3-204ENST00000483723 RESP18Q5W5W9 173 aa16.1■□□□□ 0.17
CLK3-204ENST00000483723 SLFN13Q68D06 897 aa16.1■□□□□ 0.17
CLK3-204ENST00000483723 TTBK2Q6IQ55 1244 aa16.1■□□□□ 0.17
CLK3-204ENST00000483723 SHC4Q6S5L8 630 aa16.1■□□□□ 0.17
CLK3-204ENST00000483723 HEATR3Q7Z4Q2 680 aa16.1■□□□□ 0.17
CLK3-204ENST00000483723 MICALL2Q8IY33 904 aa16.1■□□□□ 0.17
CLK3-204ENST00000483723 KRI1Q8N9T8 703 aaKnown RBP16.1■□□□□ 0.17
CLK3-204ENST00000483723 VAT1LQ9HCJ6 419 aa16.1■□□□□ 0.17
CLK3-204ENST00000483723 SEC63Q9UGP8 760 aaKnown RBP16.1■□□□□ 0.17
CLK3-204ENST00000483723 SRPRBQ9Y5M8 271 aaKnown RBP16.1■□□□□ 0.17
CLK3-204ENST00000483723 CAMK4Q16566 473 aa16.09■□□□□ 0.17
CLK3-204ENST00000483723 ADGRF4Q8IZF3 695 aa16.09■□□□□ 0.17
CLK3-204ENST00000483723 GMCL1Q96IK5 515 aa16.09■□□□□ 0.17
CLK3-204ENST00000483723 TEPSINQ96N21 525 aa16.09■□□□□ 0.17
CLK3-204ENST00000483723 FHDC1Q9C0D6 1143 aaPredicted RBP16.09■□□□□ 0.17
CLK3-204ENST00000483723 PCDHA6Q9UN73 950 aa16.09■□□□□ 0.17
CLK3-204ENST00000483723 PCDHA8Q9Y5H6 950 aa16.09■□□□□ 0.17
CLK3-204ENST00000483723 ZNF541Q9H0D2 1346 aa16.09■□□□□ 0.17
CLK3-204ENST00000483723 PNMA6FA0A0J9YX94 578 aa16.08■□□□□ 0.17
CLK3-204ENST00000483723 F5H6K3 240 aa16.08■□□□□ 0.17
CLK3-204ENST00000483723 WNT7AO00755 349 aa16.08■□□□□ 0.17
CLK3-204ENST00000483723 LMNB1P20700 586 aa16.08■□□□□ 0.17
CLK3-204ENST00000483723 KLRC3Q07444 240 aa16.08■□□□□ 0.17
CLK3-204ENST00000483723 TNFAIP1Q13829 316 aa16.08■□□□□ 0.17
CLK3-204ENST00000483723 RASA3Q14644 834 aa16.08■□□□□ 0.17
CLK3-204ENST00000483723 TTC38Q5R3I4 469 aa16.08■□□□□ 0.17
CLK3-204ENST00000483723 CDAN1Q8IWY9 1227 aa16.08■□□□□ 0.17
CLK3-204ENST00000483723 TIGD1Q96MW7 591 aa16.08■□□□□ 0.17
CLK3-204ENST00000483723 GJA3Q9Y6H8 435 aa16.08■□□□□ 0.17
CLK3-204ENST00000483723 A0A1W2PRG0 241 aa16.08■□□□□ 0.16
CLK3-204ENST00000483723 KINO60870 393 aaKnown RBP16.08■□□□□ 0.16
CLK3-204ENST00000483723 CCDC192P0DO97 292 aa16.08■□□□□ 0.16
CLK3-204ENST00000483723 PFKFB1P16118 471 aa16.08■□□□□ 0.16
CLK3-204ENST00000483723 GNA11P29992 359 aa16.08■□□□□ 0.16
CLK3-204ENST00000483723 CAP2P40123 477 aa16.08■□□□□ 0.16
CLK3-204ENST00000483723 NAPAP54920 295 aa16.08■□□□□ 0.16
CLK3-204ENST00000483723 PIK3AP1Q6ZUJ8 805 aa16.08■□□□□ 0.16
CLK3-204ENST00000483723 ARHGAP27Q6ZUM4 889 aa16.08■□□□□ 0.16
CLK3-204ENST00000483723 SAMD7Q7Z3H4 446 aa16.08■□□□□ 0.16
CLK3-204ENST00000483723 HOMER1Q86YM7 354 aa16.08■□□□□ 0.16
CLK3-204ENST00000483723 CLIC6Q96NY7 704 aa16.08■□□□□ 0.16
CLK3-204ENST00000483723 PANK2Q9BZ23 570 aa16.08■□□□□ 0.16
CLK3-204ENST00000483723 C6orf50Q9HD87 102 aa16.08■□□□□ 0.16
CLK3-204ENST00000483723 SMCO2A6NFE2 343 aa16.07■□□□□ 0.16
CLK3-204ENST00000483723 DCAF8L1A6NGE4 600 aa16.07■□□□□ 0.16
CLK3-204ENST00000483723 ZNF202O95125 648 aa16.07■□□□□ 0.16
CLK3-204ENST00000483723 SLC1A4P43007 532 aa16.07■□□□□ 0.16
CLK3-204ENST00000483723 CCDC96Q2M329 555 aa16.07■□□□□ 0.16
CLK3-204ENST00000483723 PPP1R18Q6NYC8 613 aa16.07■□□□□ 0.16
CLK3-204ENST00000483723 BTNL9Q6UXG8 535 aa16.07■□□□□ 0.16
CLK3-204ENST00000483723 KCTD1Q719H9 257 aa16.07■□□□□ 0.16
CLK3-204ENST00000483723 ZBTB21Q9ULJ3 1066 aa16.07■□□□□ 0.16
CLK3-204ENST00000483723 TMX2Q9Y320 296 aa16.07■□□□□ 0.16
CLK3-204ENST00000483723 PHF20L1A8MW92 1017 aa16.06■□□□□ 0.16
CLK3-204ENST00000483723 NDUFB10O96000 172 aa16.06■□□□□ 0.16
CLK3-204ENST00000483723 ATP2B1P20020 1258 aa16.06■□□□□ 0.16
CLK3-204ENST00000483723 ATP2C1P98194 919 aaPredicted RBP16.06■□□□□ 0.16
CLK3-204ENST00000483723 UVSSAQ2YD98 709 aa16.06■□□□□ 0.16
CLK3-204ENST00000483723 FERMT2Q96AC1 680 aa16.06■□□□□ 0.16
CLK3-204ENST00000483723 USP17L10C9JJH3 530 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 ZBTB5O15062 677 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 PPP1R11O60927 126 aaPredicted RBP16.05■□□□□ 0.16
CLK3-204ENST00000483723 SLC16A2P36021 539 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 GRIN1Q05586 938 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 TYRO3Q06418 890 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 ZNF174Q15697 407 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 KIF4BQ2VIQ3 1234 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 MIGA2Q7L4E1 593 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 KRT25Q7Z3Z0 450 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 CKAP2LQ8IYA6 745 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 ELOA2Q8IYF1 753 aaPredicted RBP16.05■□□□□ 0.16
CLK3-204ENST00000483723 GPC2Q8N158 579 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 C4orf32Q8N8J7 132 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 ARHGEF10LQ9HCE6 1279 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 GINM1Q9NU53 330 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 CCDC194A0A1B0GVG4 234 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 H7C1D1 291 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 SYKP43405 635 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 TBC1D10BQ4KMP7 808 aaPredicted RBP16.05■□□□□ 0.16
CLK3-204ENST00000483723 RASGRP4Q8TDF6 673 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 SYT17Q9BSW7 474 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 HACL1Q9UJ83 578 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 MRVI1Q9Y6F6 885 aa16.05■□□□□ 0.16
CLK3-204ENST00000483723 BMP3P12645 472 aa16.04■□□□□ 0.16
CLK3-204ENST00000483723 PTGDRQ13258 359 aa16.04■□□□□ 0.16
CLK3-204ENST00000483723 COA7Q96BR5 231 aa16.04■□□□□ 0.16
CLK3-204ENST00000483723 GPRC5DQ9NZD1 345 aa16.04■□□□□ 0.16
CLK3-204ENST00000483723 KCNH3Q9ULD8 1083 aa16.04■□□□□ 0.16
CLK3-204ENST00000483723 ASTN2O75129 1339 aaPredicted RBP16.04■□□□□ 0.16
CLK3-204ENST00000483723 ARL6IP4Q66PJ3 421 aaKnown RBP16.03■□□□□ 0.16
CLK3-204ENST00000483723 ACER1Q8TDN7 264 aa16.03■□□□□ 0.16
CLK3-204ENST00000483723 RIC8AQ9NPQ8 531 aa16.03■□□□□ 0.16
CLK3-204ENST00000483723 ATAD5Q96QE3 1844 aa16.03■□□□□ 0.16
CLK3-204ENST00000483723 ASNSP08243 561 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms