RNA–Protein interactions for RNA: ENST00000479364.1

NFIA-210, Transcript of nuclear factor I A, human

TSL 5

Gene NFIA, Length 1,010 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFIA-210	ENST00000479364	TTLL1	O95922	423 aa		13.74	□□□□□ -0.21
NFIA-210	ENST00000479364	UQCRH	P07919	91 aa		13.74	□□□□□ -0.21
NFIA-210	ENST00000479364	SNHG28	P0DPA3	235 aa		13.74	□□□□□ -0.21
NFIA-210	ENST00000479364	MCM7	P33993	719 aa		13.74	□□□□□ -0.21
NFIA-210	ENST00000479364	NAPA	P54920	295 aa		13.74	□□□□□ -0.21
NFIA-210	ENST00000479364	NONO	Q15233	471 aa	Known RBP eCLIP	13.74	□□□□□ -0.21	7e-9	■■■□□ 16.2
NFIA-210	ENST00000479364	GPATCH4	Q5T3I0	446 aa	Known RBP	13.74	□□□□□ -0.21
NFIA-210	ENST00000479364	SPATA1	Q5VX52	437 aa		13.74	□□□□□ -0.21
NFIA-210	ENST00000479364	TMC6	Q7Z403	805 aa		13.74	□□□□□ -0.21
NFIA-210	ENST00000479364	PDILT	Q8N807	584 aa		13.74	□□□□□ -0.21
NFIA-210	ENST00000479364	C4orf32	Q8N8J7	132 aa		13.74	□□□□□ -0.21
NFIA-210	ENST00000479364	CEP95	Q96GE4	821 aa		13.74	□□□□□ -0.21
NFIA-210	ENST00000479364	EPSTI1	Q96J88	318 aa		13.74	□□□□□ -0.21
NFIA-210	ENST00000479364	CCSER1	Q9C0I3	900 aa		13.74	□□□□□ -0.21
NFIA-210	ENST00000479364	HSD3B7	Q9H2F3	369 aa		13.74	□□□□□ -0.21
NFIA-210	ENST00000479364		A0A087WWV3	80 aa		13.73	□□□□□ -0.21
NFIA-210	ENST00000479364	ZNF18	P17022	549 aa		13.73	□□□□□ -0.21
NFIA-210	ENST00000479364	CDK11B	P21127	795 aa	Known RBP	13.73	□□□□□ -0.21
NFIA-210	ENST00000479364	PPP1R2	P41236	205 aa		13.73	□□□□□ -0.21
NFIA-210	ENST00000479364	CCZ1B	P86790	482 aa		13.73	□□□□□ -0.21
NFIA-210	ENST00000479364	CCZ1	P86791	482 aa	Predicted RBP	13.73	□□□□□ -0.21
NFIA-210	ENST00000479364	LRMP	Q12912	555 aa		13.73	□□□□□ -0.21
NFIA-210	ENST00000479364	E2F4	Q16254	413 aa		13.73	□□□□□ -0.21
NFIA-210	ENST00000479364	TPD52L1	Q16890	204 aa	Predicted RBP	13.73	□□□□□ -0.21
NFIA-210	ENST00000479364	CFAP100	Q494V2	611 aa		13.73	□□□□□ -0.21
NFIA-210	ENST00000479364	FCHSD1	Q86WN1	690 aa		13.73	□□□□□ -0.21
NFIA-210	ENST00000479364	VSTM4	Q8IW00	320 aa		13.73	□□□□□ -0.21
NFIA-210	ENST00000479364	NAP1L4	Q99733	375 aa	Known RBP	13.73	□□□□□ -0.21
NFIA-210	ENST00000479364	FANCL	Q9NW38	375 aa		13.73	□□□□□ -0.21
NFIA-210	ENST00000479364	SMCO2	A6NFE2	343 aa		13.72	□□□□□ -0.21
NFIA-210	ENST00000479364	PRR29	P0C7W0	189 aa		13.72	□□□□□ -0.21
NFIA-210	ENST00000479364	PDHB	P11177	359 aa		13.72	□□□□□ -0.21
NFIA-210	ENST00000479364	BMP6	P22004	513 aa		13.72	□□□□□ -0.21
NFIA-210	ENST00000479364	RXRB	P28702	533 aa		13.72	□□□□□ -0.21
NFIA-210	ENST00000479364	SPAG1	Q07617	926 aa		13.72	□□□□□ -0.21
NFIA-210	ENST00000479364	SLC4A8	Q2Y0W8	1093 aa		13.72	□□□□□ -0.21
NFIA-210	ENST00000479364	MCTP2	Q6DN12	878 aa		13.72	□□□□□ -0.21
NFIA-210	ENST00000479364	ISM2	Q6H9L7	571 aa		13.72	□□□□□ -0.21
NFIA-210	ENST00000479364	PDXDC2P	Q6P474	469 aa		13.72	□□□□□ -0.21
NFIA-210	ENST00000479364	USP49	Q70CQ1	688 aa		13.72	□□□□□ -0.21
NFIA-210	ENST00000479364	C2CD5	Q86YS7	1000 aa		13.72	□□□□□ -0.21
NFIA-210	ENST00000479364	TEX2	Q8IWB9	1127 aa		13.72	□□□□□ -0.21
NFIA-210	ENST00000479364	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.72	□□□□□ -0.21
NFIA-210	ENST00000479364	CCDC47	Q96A33	483 aa	Known RBP	13.72	□□□□□ -0.21
NFIA-210	ENST00000479364	NFE2L3	Q9Y4A8	694 aa		13.72	□□□□□ -0.21
NFIA-210	ENST00000479364	FOXN1	O15353	648 aa		13.71	□□□□□ -0.21
NFIA-210	ENST00000479364	UBA7	P41226	1012 aa		13.71	□□□□□ -0.21
NFIA-210	ENST00000479364	KCNB1	Q14721	858 aa		13.71	□□□□□ -0.21
NFIA-210	ENST00000479364	FILIP1L	Q4L180	1135 aa		13.71	□□□□□ -0.21
NFIA-210	ENST00000479364	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.71	□□□□□ -0.21
NFIA-210	ENST00000479364	CDC42EP5	Q6NZY7	148 aa		13.71	□□□□□ -0.21
NFIA-210	ENST00000479364	NEK8	Q86SG6	692 aa		13.71	□□□□□ -0.21
NFIA-210	ENST00000479364	REXO1	Q8N1G1	1221 aa	Known RBP	13.71	□□□□□ -0.21
NFIA-210	ENST00000479364	CERS5	Q8N5B7	392 aa		13.71	□□□□□ -0.21
NFIA-210	ENST00000479364	ANKRD20A12P	Q8NF67	263 aa		13.71	□□□□□ -0.21
NFIA-210	ENST00000479364	IDI2	Q9BXS1	227 aa		13.71	□□□□□ -0.21
NFIA-210	ENST00000479364	SERPINA10	Q9UK55	444 aa		13.71	□□□□□ -0.21
NFIA-210	ENST00000479364	SYNPO2	Q9UMS6	1093 aa		13.71	□□□□□ -0.21
NFIA-210	ENST00000479364		A0A087X0B3	334 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	PNMA6F	A0A0J9YX94	578 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	SLC26A4	O43511	780 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	OR52Z1	P0C646	297 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	ATP1A3	P13637	1013 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	TNNT1	P13805	278 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	STAT6	P42226	847 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	AFM	P43652	599 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	CRK	P46108	304 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	AMPD3	Q01432	767 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	ZNF543	Q08ER8	600 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	PICALM	Q13492	652 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	CUL4B	Q13620	913 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	PTPN14	Q15678	1187 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	SLC35G1	Q2M3R5	365 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	RRAGB	Q5VZM2	374 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	USP17L2	Q6R6M4	530 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	SLC51A	Q86UW1	340 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	CCAR2	Q8N163	923 aa	Known RBP	13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.7	□□□□□ -0.22	9e-12	■□□□□ 10.7
NFIA-210	ENST00000479364	RAB34	Q9BZG1	259 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	DISC1	Q9NRI5	854 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	PI4KB	Q9UBF8	816 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	RGS17	Q9UGC6	210 aa	Predicted RBP	13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	RWDD2A	Q9UIY3	292 aa		13.7	□□□□□ -0.22
NFIA-210	ENST00000479364	SYNRG	Q9UMZ2	1314 aa		13.69	□□□□□ -0.22
NFIA-210	ENST00000479364	COL2A1	P02458	1487 aa	Predicted RBP	13.69	□□□□□ -0.22
NFIA-210	ENST00000479364	GOLGA6L9	A6NEM1	432 aa		13.69	□□□□□ -0.22
NFIA-210	ENST00000479364	USP17L5	A8MUK1	530 aa		13.69	□□□□□ -0.22
NFIA-210	ENST00000479364	WNT7A	O00755	349 aa		13.69	□□□□□ -0.22
NFIA-210	ENST00000479364	RRP9	O43818	475 aa	Known RBP	13.69	□□□□□ -0.22
NFIA-210	ENST00000479364	VEGFA	P15692	232 aa	Predicted RBP	13.69	□□□□□ -0.22
NFIA-210	ENST00000479364	SHMT1	P34896	483 aa		13.69	□□□□□ -0.22
NFIA-210	ENST00000479364	ADCY7	P51828	1080 aa		13.69	□□□□□ -0.22
NFIA-210	ENST00000479364	STIM1	Q13586	685 aa		13.69	□□□□□ -0.22
NFIA-210	ENST00000479364	SYCP1	Q15431	976 aa		13.69	□□□□□ -0.22
NFIA-210	ENST00000479364	DOK7	Q18PE1	504 aa		13.69	□□□□□ -0.22
NFIA-210	ENST00000479364	INF2	Q27J81	1249 aa		13.69	□□□□□ -0.22
NFIA-210	ENST00000479364	SPECC1L	Q69YQ0	1117 aa		13.69	□□□□□ -0.22
NFIA-210	ENST00000479364	TYW1B	Q6NUM6	668 aa		13.69	□□□□□ -0.22
NFIA-210	ENST00000479364	ARMCX5	Q6P1M9	558 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms