RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 STAT2P52630 851 aa17.78■□□□□ 0.44
COL16A1-211ENST00000479100 PRMT2P55345 433 aa17.78■□□□□ 0.44
COL16A1-211ENST00000479100 PLS1Q14651 629 aa17.78■□□□□ 0.44
COL16A1-211ENST00000479100 KIF22Q14807 665 aa17.78■□□□□ 0.44
COL16A1-211ENST00000479100 SLC9C1Q4G0N8 1177 aa17.78■□□□□ 0.44
COL16A1-211ENST00000479100 TTBK2Q6IQ55 1244 aa17.78■□□□□ 0.44
COL16A1-211ENST00000479100 FAM160B2Q86V87 743 aa17.78■□□□□ 0.44
COL16A1-211ENST00000479100 TMTC2Q8N394 836 aa17.78■□□□□ 0.44
COL16A1-211ENST00000479100 PRPF38AQ8NAV1 312 aaKnown RBP17.78■□□□□ 0.44
COL16A1-211ENST00000479100 GPRC5AQ8NFJ5 357 aa17.78■□□□□ 0.44
COL16A1-211ENST00000479100 TXNRD2Q9NNW7 524 aa17.78■□□□□ 0.44
COL16A1-211ENST00000479100 WDR19Q8NEZ3 1342 aa17.77■□□□□ 0.44
COL16A1-211ENST00000479100 PARP1P09874 1014 aaKnown RBP17.77■□□□□ 0.44
COL16A1-211ENST00000479100 SLC16A2P36021 539 aa17.77■□□□□ 0.44
COL16A1-211ENST00000479100 PSMC4P43686 418 aa17.77■□□□□ 0.44
COL16A1-211ENST00000479100 ERVK-9P63128 1117 aa17.77■□□□□ 0.44
COL16A1-211ENST00000479100 ERVK-24P63145 666 aa17.77■□□□□ 0.44
COL16A1-211ENST00000479100 ZNF543Q08ER8 600 aa17.77■□□□□ 0.44
COL16A1-211ENST00000479100 FAM110CQ1W6H9 321 aa17.77■□□□□ 0.44
COL16A1-211ENST00000479100 NBPF11Q86T75 865 aa17.77■□□□□ 0.44
COL16A1-211ENST00000479100 CCAR1Q8IX12 1150 aaKnown RBP17.77■□□□□ 0.44
COL16A1-211ENST00000479100 NUP133Q8WUM0 1156 aa17.77■□□□□ 0.44
COL16A1-211ENST00000479100 UPF2Q9HAU5 1272 aaKnown RBP17.77■□□□□ 0.44
COL16A1-211ENST00000479100 BTBD7Q9P203 1132 aa17.77■□□□□ 0.44
COL16A1-211ENST00000479100 SRRDQ9UH36 339 aa17.77■□□□□ 0.44
COL16A1-211ENST00000479100 NAP1L2Q9ULW6 460 aaPredicted RBP17.77■□□□□ 0.44
COL16A1-211ENST00000479100 RABGAP1Q9Y3P9 1069 aa17.77■□□□□ 0.44
COL16A1-211ENST00000479100 CYP46A1Q9Y6A2 500 aa17.77■□□□□ 0.44
COL16A1-211ENST00000479100 MYPNQ86TC9 1320 aa17.76■□□□□ 0.43
COL16A1-211ENST00000479100 ZBED4O75132 1171 aa17.76■□□□□ 0.43
COL16A1-211ENST00000479100 FMNL1O95466 1100 aaPredicted RBP17.76■□□□□ 0.43
COL16A1-211ENST00000479100 SNHG28P0DPA3 235 aa17.76■□□□□ 0.43
COL16A1-211ENST00000479100 LIFRP42702 1097 aa17.76■□□□□ 0.43
COL16A1-211ENST00000479100 SLC4A3P48751 1232 aa17.76■□□□□ 0.43
COL16A1-211ENST00000479100 ANAPC15P60006 121 aa17.76■□□□□ 0.43
COL16A1-211ENST00000479100 GPATCH4Q5T3I0 446 aaKnown RBP17.76■□□□□ 0.43
COL16A1-211ENST00000479100 POTEEQ6S8J3 1075 aa17.76■□□□□ 0.43
COL16A1-211ENST00000479100 LBX2Q6XYB7 198 aa17.76■□□□□ 0.43
COL16A1-211ENST00000479100 SYNE3Q6ZMZ3 975 aa17.76■□□□□ 0.43
COL16A1-211ENST00000479100 Q6ZUG5 572 aa17.76■□□□□ 0.43
COL16A1-211ENST00000479100 RUFY3Q7L099 469 aa17.76■□□□□ 0.43
COL16A1-211ENST00000479100 RAB11FIP4Q86YS3 637 aa17.76■□□□□ 0.43
COL16A1-211ENST00000479100 ZNF654Q8IZM8 581 aa17.76■□□□□ 0.43
COL16A1-211ENST00000479100 MB21D1Q8N884 522 aa17.76■□□□□ 0.43
COL16A1-211ENST00000479100 SH3TC2Q8TF17 1288 aa17.76■□□□□ 0.43
COL16A1-211ENST00000479100 MYL10Q9BUA6 226 aa17.76■□□□□ 0.43
COL16A1-211ENST00000479100 UPF3BQ9BZI7 483 aaKnown RBP17.76■□□□□ 0.43
COL16A1-211ENST00000479100 TM6SF1Q9BZW5 370 aa17.76■□□□□ 0.43
COL16A1-211ENST00000479100 CWC22Q9HCG8 908 aaKnown RBP17.76■□□□□ 0.43
COL16A1-211ENST00000479100 ZSWIM6Q9HCJ5 1215 aa17.76■□□□□ 0.43
COL16A1-211ENST00000479100 MORF4L1Q9UBU8 362 aa17.76■□□□□ 0.43
COL16A1-211ENST00000479100 VWA5AO00534 786 aa17.75■□□□□ 0.43
COL16A1-211ENST00000479100 CNMDO75829 334 aa17.75■□□□□ 0.43
COL16A1-211ENST00000479100 SNAP25P60880 206 aa17.75■□□□□ 0.43
COL16A1-211ENST00000479100 Q3C1V9 767 aa17.75■□□□□ 0.43
COL16A1-211ENST00000479100 ASPRV1Q53RT3 343 aa17.75■□□□□ 0.43
COL16A1-211ENST00000479100 SYDE2Q5VT97 1194 aa17.75■□□□□ 0.43
COL16A1-211ENST00000479100 WDR78Q5VTH9 848 aa17.75■□□□□ 0.43
COL16A1-211ENST00000479100 TMEM106CQ9BVX2 250 aa17.75■□□□□ 0.43
COL16A1-211ENST00000479100 C22orf23Q9BZE7 217 aa17.75■□□□□ 0.43
COL16A1-211ENST00000479100 UBA5Q9GZZ9 404 aa17.75■□□□□ 0.43
COL16A1-211ENST00000479100 PRR12Q9ULL5 1215 aa17.75■□□□□ 0.43
COL16A1-211ENST00000479100 SLC12A7Q9Y666 1083 aa17.75■□□□□ 0.43
COL16A1-211ENST00000479100 DHX16O60231 1041 aaKnown RBP17.74■□□□□ 0.43
COL16A1-211ENST00000479100 RXRAP19793 462 aa17.74■□□□□ 0.43
COL16A1-211ENST00000479100 CCNA1P78396 465 aa17.74■□□□□ 0.43
COL16A1-211ENST00000479100 CCDC144CPQ8IYA2 1237 aa17.74■□□□□ 0.43
COL16A1-211ENST00000479100 CPXCR1Q8N123 301 aa17.74■□□□□ 0.43
COL16A1-211ENST00000479100 BRF1Q92994 677 aa17.74■□□□□ 0.43
COL16A1-211ENST00000479100 CPVLQ9H3G5 476 aa17.74■□□□□ 0.43
COL16A1-211ENST00000479100 PDRG1Q9NUG6 133 aa17.74■□□□□ 0.43
COL16A1-211ENST00000479100 KLF18A0A0U1RQI7 1052 aa17.73■□□□□ 0.43
COL16A1-211ENST00000479100 PLA2G6O60733 806 aa17.73■□□□□ 0.43
COL16A1-211ENST00000479100 DDAH1O94760 285 aa17.73■□□□□ 0.43
COL16A1-211ENST00000479100 HOXD10P28358 340 aa17.73■□□□□ 0.43
COL16A1-211ENST00000479100 FCGRTP55899 365 aa17.73■□□□□ 0.43
COL16A1-211ENST00000479100 APOBRQ0VD83 1088 aa17.73■□□□□ 0.43
COL16A1-211ENST00000479100 TROAPQ12815 778 aa17.73■□□□□ 0.43
COL16A1-211ENST00000479100 GRM4Q14833 912 aa17.73■□□□□ 0.43
COL16A1-211ENST00000479100 TMEM132BQ14DG7 1078 aa17.73■□□□□ 0.43
COL16A1-211ENST00000479100 CCDC174Q6PII3 467 aa17.73■□□□□ 0.43
COL16A1-211ENST00000479100 BTNL9Q6UXG8 535 aa17.73■□□□□ 0.43
COL16A1-211ENST00000479100 SGMS1Q86VZ5 419 aa17.73■□□□□ 0.43
COL16A1-211ENST00000479100 STAG2Q8N3U4 1231 aa17.73■□□□□ 0.43
COL16A1-211ENST00000479100 CTCFLQ8NI51 663 aaPredicted RBP17.73■□□□□ 0.43
COL16A1-211ENST00000479100 SPATC1LQ9H0A9 340 aa17.73■□□□□ 0.43
COL16A1-211ENST00000479100 VAT1LQ9HCJ6 419 aa17.73■□□□□ 0.43
COL16A1-211ENST00000479100 ADAMTS5Q9UNA0 930 aa17.73■□□□□ 0.43
COL16A1-211ENST00000479100 KLRF2D3W0D1 207 aa17.72■□□□□ 0.43
COL16A1-211ENST00000479100 TNPO2O14787 897 aaKnown RBP17.72■□□□□ 0.43
COL16A1-211ENST00000479100 CALM1P0DP23 149 aa17.72■□□□□ 0.43
COL16A1-211ENST00000479100 CALM2P0DP24 149 aa17.72■□□□□ 0.43
COL16A1-211ENST00000479100 CALM3P0DP25 149 aa17.72■□□□□ 0.43
COL16A1-211ENST00000479100 PRKCZQ05513 592 aa17.72■□□□□ 0.43
COL16A1-211ENST00000479100 MICU3Q86XE3 530 aa17.72■□□□□ 0.43
COL16A1-211ENST00000479100 NCAPG2Q86XI2 1143 aa17.72■□□□□ 0.43
COL16A1-211ENST00000479100 MOV10L1Q9BXT6 1211 aaKnown RBP17.72■□□□□ 0.43
COL16A1-211ENST00000479100 BACH2Q9BYV9 841 aa17.72■□□□□ 0.43
COL16A1-211ENST00000479100 PORCNQ9H237 461 aa17.72■□□□□ 0.43
COL16A1-211ENST00000479100 SLC38A10Q9HBR0 1119 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms