RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 WFDC3Q8IUB2 231 aa6.05□□□□□ -1.44
SMARCA1-204ENST00000478420 FIBCD1Q8N539 461 aa6.05□□□□□ -1.44
SMARCA1-204ENST00000478420 CARS2Q9HA77 564 aaKnown RBP6.05□□□□□ -1.44
SMARCA1-204ENST00000478420 SUSD2Q9UGT4 822 aa6.05□□□□□ -1.44
SMARCA1-204ENST00000478420 MINPP1Q9UNW1 487 aa6.05□□□□□ -1.44
SMARCA1-204ENST00000478420 DIS3Q9Y2L1 958 aaKnown RBP6.05□□□□□ -1.44
SMARCA1-204ENST00000478420 SF3B6Q9Y3B4 125 aaKnown RBP6.05□□□□□ -1.44
SMARCA1-204ENST00000478420 SUSD5O60279 629 aa6.04□□□□□ -1.44
SMARCA1-204ENST00000478420 ESR1P03372 595 aa6.04□□□□□ -1.44
SMARCA1-204ENST00000478420 GSNP06396 782 aa6.04□□□□□ -1.44
SMARCA1-204ENST00000478420 PCBP3P57721 371 aaKnown RBP6.04□□□□□ -1.44
SMARCA1-204ENST00000478420 EGR3Q06889 387 aa6.04□□□□□ -1.44
SMARCA1-204ENST00000478420 PLCL1Q15111 1095 aa6.04□□□□□ -1.44
SMARCA1-204ENST00000478420 MRM1Q6IN84 353 aaKnown RBP6.04□□□□□ -1.44
SMARCA1-204ENST00000478420 ADCY4Q8NFM4 1077 aa6.04□□□□□ -1.44
SMARCA1-204ENST00000478420 SYTL4Q96C24 671 aaPredicted RBP6.04□□□□□ -1.44
SMARCA1-204ENST00000478420 NOL6Q9H6R4 1146 aaKnown RBP6.04□□□□□ -1.44
SMARCA1-204ENST00000478420 PCDHA11Q9Y5I1 949 aa6.04□□□□□ -1.44
SMARCA1-204ENST00000478420 CCDC85CA6NKD9 419 aa6.03□□□□□ -1.44
SMARCA1-204ENST00000478420 FUT4P22083 530 aa6.03□□□□□ -1.44
SMARCA1-204ENST00000478420 SERINC3Q13530 473 aa6.03□□□□□ -1.44
SMARCA1-204ENST00000478420 SV2CQ496J9 727 aa6.03□□□□□ -1.44
SMARCA1-204ENST00000478420 RNF111Q6ZNA4 994 aa6.03□□□□□ -1.44
SMARCA1-204ENST00000478420 NBPF11Q86T75 865 aa6.03□□□□□ -1.44
SMARCA1-204ENST00000478420 CRACR2BQ8N4Y2 399 aaPredicted RBP6.03□□□□□ -1.44
SMARCA1-204ENST00000478420 USHBP1Q8N6Y0 703 aa6.03□□□□□ -1.44
SMARCA1-204ENST00000478420 LINC00116Q8NCU8 138 aa6.03□□□□□ -1.44
SMARCA1-204ENST00000478420 PI4K2BQ8TCG2 481 aa6.03□□□□□ -1.44
SMARCA1-204ENST00000478420 PPP1R14AQ96A00 147 aa6.03□□□□□ -1.44
SMARCA1-204ENST00000478420 RCC1LQ96I51 464 aaKnown RBP6.03□□□□□ -1.44
SMARCA1-204ENST00000478420 EPN3Q9H201 632 aa6.03□□□□□ -1.44
SMARCA1-204ENST00000478420 APEX2Q9UBZ4 518 aa6.03□□□□□ -1.44
SMARCA1-204ENST00000478420 TCFL5Q9UL49 500 aa6.03□□□□□ -1.44
SMARCA1-204ENST00000478420 H0Y8X5 98 aa6.02□□□□□ -1.45
SMARCA1-204ENST00000478420 AGRPO00253 132 aa6.02□□□□□ -1.45
SMARCA1-204ENST00000478420 NOP56O00567 594 aaKnown RBP6.02□□□□□ -1.45
SMARCA1-204ENST00000478420 SYPP08247 313 aa6.02□□□□□ -1.45
SMARCA1-204ENST00000478420 BMP8BP34820 402 aa6.02□□□□□ -1.45
SMARCA1-204ENST00000478420 CTSKP43235 329 aa6.02□□□□□ -1.45
SMARCA1-204ENST00000478420 GP2P55259 537 aaKnown RBP6.02□□□□□ -1.45
SMARCA1-204ENST00000478420 PPP2R5DQ14738 602 aa6.02□□□□□ -1.45
SMARCA1-204ENST00000478420 SLC23A3Q6PIS1 610 aa6.02□□□□□ -1.45
SMARCA1-204ENST00000478420 CRTC3Q6UUV7 619 aa6.02□□□□□ -1.45
SMARCA1-204ENST00000478420 ARHGEF39Q8N4T4 335 aa6.02□□□□□ -1.45
SMARCA1-204ENST00000478420 BVESQ8NE79 360 aa6.02□□□□□ -1.45
SMARCA1-204ENST00000478420 ZDHHC15Q96MV8 337 aa6.02□□□□□ -1.45
SMARCA1-204ENST00000478420 FOXP3Q9BZS1 431 aa6.02□□□□□ -1.45
SMARCA1-204ENST00000478420 CCDC113Q9H0I3 377 aa6.02□□□□□ -1.45
SMARCA1-204ENST00000478420 LRP2BPQ9P2M1 347 aa6.02□□□□□ -1.45
SMARCA1-204ENST00000478420 CGGBP1Q9UFW8 167 aaPredicted RBP6.02□□□□□ -1.45
SMARCA1-204ENST00000478420 AKT3Q9Y243 479 aa6.02□□□□□ -1.45
SMARCA1-204ENST00000478420 MSRB2Q9Y3D2 182 aa6.02□□□□□ -1.45
SMARCA1-204ENST00000478420 PDPK1O15530 556 aa6.01□□□□□ -1.45
SMARCA1-204ENST00000478420 NOP2P46087 812 aaKnown RBP6.01□□□□□ -1.45
SMARCA1-204ENST00000478420 POU4F1Q01851 419 aa6.01□□□□□ -1.45
SMARCA1-204ENST00000478420 SLC10A6Q3KNW5 377 aa6.01□□□□□ -1.45
SMARCA1-204ENST00000478420 POMZP3Q6PJE2 187 aa6.01□□□□□ -1.45
SMARCA1-204ENST00000478420 LRRN4CLQ8ND94 238 aa6.01□□□□□ -1.45
SMARCA1-204ENST00000478420 ST13P5Q8NFI4 369 aaPredicted RBP6.01□□□□□ -1.45
SMARCA1-204ENST00000478420 MKL1Q969V6 931 aa6.01□□□□□ -1.45
SMARCA1-204ENST00000478420 ALPK1Q96QP1 1244 aa6.01□□□□□ -1.45
SMARCA1-204ENST00000478420 SRPK1Q96SB4 655 aaKnown RBP6.01□□□□□ -1.45
SMARCA1-204ENST00000478420 OSBPL2Q9H1P3 480 aa6.01□□□□□ -1.45
SMARCA1-204ENST00000478420 PRDM7Q9NQW5 492 aa6.01□□□□□ -1.45
SMARCA1-204ENST00000478420 FKTNO75072 461 aa6□□□□□ -1.45
SMARCA1-204ENST00000478420 VAV1P15498 845 aa6□□□□□ -1.45
SMARCA1-204ENST00000478420 ENDOUP21128 410 aaKnown RBP6□□□□□ -1.45
SMARCA1-204ENST00000478420 RPL10P27635 214 aaKnown RBP6□□□□□ -1.45
SMARCA1-204ENST00000478420 AMPD2Q01433 879 aa6□□□□□ -1.45
SMARCA1-204ENST00000478420 TEKQ02763 1124 aa6□□□□□ -1.45
SMARCA1-204ENST00000478420 GRB10Q13322 594 aa6□□□□□ -1.45
SMARCA1-204ENST00000478420 RASGRF1Q13972 1273 aa6□□□□□ -1.45
SMARCA1-204ENST00000478420 LRP10Q7Z4F1 713 aa6□□□□□ -1.45
SMARCA1-204ENST00000478420 ABI1Q8IZP0 508 aa6□□□□□ -1.45
SMARCA1-204ENST00000478420 ZNF513Q8N8E2 541 aaPredicted RBP6□□□□□ -1.45
SMARCA1-204ENST00000478420 CCDC120Q96HB5 630 aa6□□□□□ -1.45
SMARCA1-204ENST00000478420 DEPDC7Q96QD5 511 aa6□□□□□ -1.45
SMARCA1-204ENST00000478420 LNPKQ9C0E8 428 aa6□□□□□ -1.45
SMARCA1-204ENST00000478420 SLAMF8Q9P0V8 285 aa6□□□□□ -1.45
SMARCA1-204ENST00000478420 EMC9Q9Y3B6 208 aa6□□□□□ -1.45
SMARCA1-204ENST00000478420 IQCA1LA6NCM1 817 aa5.99□□□□□ -1.45
SMARCA1-204ENST00000478420 ZNF205O95201 554 aa5.99□□□□□ -1.45
SMARCA1-204ENST00000478420 KCNH1O95259 989 aa5.99□□□□□ -1.45
SMARCA1-204ENST00000478420 CD3EP07766 207 aa5.99□□□□□ -1.45
SMARCA1-204ENST00000478420 IFRD2Q12894 506 aaPredicted RBP5.99□□□□□ -1.45
SMARCA1-204ENST00000478420 NFE2L2Q16236 605 aa5.99□□□□□ -1.45
SMARCA1-204ENST00000478420 ZNF792Q3KQV3 632 aa5.99□□□□□ -1.45
SMARCA1-204ENST00000478420 WAPLQ7Z5K2 1190 aa5.99□□□□□ -1.45
SMARCA1-204ENST00000478420 ZNF669Q96BR6 464 aaPredicted RBP5.99□□□□□ -1.45
SMARCA1-204ENST00000478420 CDADC1Q9BWV3 514 aa5.99□□□□□ -1.45
SMARCA1-204ENST00000478420 ZSWIM4Q9H7M6 989 aa5.99□□□□□ -1.45
SMARCA1-204ENST00000478420 MBNL3Q9NUK0 354 aaKnown RBP5.99□□□□□ -1.45
SMARCA1-204ENST00000478420 SNTG2Q9NY99 539 aa5.99□□□□□ -1.45
SMARCA1-204ENST00000478420 ADAMTS6Q9UKP5 1117 aa5.99□□□□□ -1.45
SMARCA1-204ENST00000478420 DNAJC25-GNG10A0A024R161 153 aa5.98□□□□□ -1.45
SMARCA1-204ENST00000478420 VAMP4O75379 141 aa5.98□□□□□ -1.45
SMARCA1-204ENST00000478420 ITGAVP06756 1048 aa5.98□□□□□ -1.45
SMARCA1-204ENST00000478420 RNASE1P07998 156 aaKnown RBP5.98□□□□□ -1.45
SMARCA1-204ENST00000478420 DUSP4Q13115 394 aa5.98□□□□□ -1.45
SMARCA1-204ENST00000478420 RASA3Q14644 834 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms