RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 TTBK2Q6IQ55 1244 aa26.3■■□□□ 1.8
SF1-214ENST00000477596 IQCA1Q86XH1 822 aa26.3■■□□□ 1.8
SF1-214ENST00000477596 RIOX2Q8IUF8 465 aa26.3■■□□□ 1.8
SF1-214ENST00000477596 ENAHQ8N8S7 591 aaPredicted RBP26.3■■□□□ 1.8
SF1-214ENST00000477596 DCAF4Q8WV16 495 aa26.3■■□□□ 1.8
SF1-214ENST00000477596 ZSCAN10Q96SZ4 725 aaPredicted RBP26.3■■□□□ 1.8
SF1-214ENST00000477596 APBA2Q99767 749 aa26.3■■□□□ 1.8
SF1-214ENST00000477596 UNC93B1Q9H1C4 597 aa26.3■■□□□ 1.8
SF1-214ENST00000477596 TNKSO95271 1327 aa26.3■■□□□ 1.8
SF1-214ENST00000477596 E7EWF7 191 aa26.29■■□□□ 1.8
SF1-214ENST00000477596 CCL5P13501 91 aa26.29■■□□□ 1.8
SF1-214ENST00000477596 STAT3P40763 770 aa26.29■■□□□ 1.8
SF1-214ENST00000477596 RGS19P49795 217 aa26.29■■□□□ 1.8
SF1-214ENST00000477596 SNAP25P60880 206 aa26.29■■□□□ 1.8
SF1-214ENST00000477596 CPXCR1Q8N123 301 aa26.29■■□□□ 1.8
SF1-214ENST00000477596 TTC14Q96N46 770 aa26.29■■□□□ 1.8
SF1-214ENST00000477596 SLC38A10Q9HBR0 1119 aa26.29■■□□□ 1.8
SF1-214ENST00000477596 RAVER2Q9HCJ3 691 aaKnown RBP26.29■■□□□ 1.8
SF1-214ENST00000477596 HMGCRP04035 888 aa26.28■■□□□ 1.8
SF1-214ENST00000477596 PDHBP11177 359 aa26.28■■□□□ 1.8
SF1-214ENST00000477596 EN2P19622 333 aaPredicted RBP26.28■■□□□ 1.8
SF1-214ENST00000477596 ADORA2AP29274 412 aa26.28■■□□□ 1.8
SF1-214ENST00000477596 UBXN2AP68543 259 aa26.28■■□□□ 1.8
SF1-214ENST00000477596 SNRNP48Q6IEG0 339 aaKnown RBP26.28■■□□□ 1.8
SF1-214ENST00000477596 DGKHQ86XP1 1220 aa26.28■■□□□ 1.8
SF1-214ENST00000477596 TMEM106CQ9BVX2 250 aa26.28■■□□□ 1.8
SF1-214ENST00000477596 MROH8Q9H579 483 aa26.28■■□□□ 1.8
SF1-214ENST00000477596 GPCPD1Q9NPB8 672 aa26.28■■□□□ 1.8
SF1-214ENST00000477596 RIPK3Q9Y572 518 aa26.28■■□□□ 1.8
SF1-214ENST00000477596 ZBED4O75132 1171 aa26.27■■□□□ 1.8
SF1-214ENST00000477596 XRCC5P13010 732 aaKnown RBP26.27■■□□□ 1.8
SF1-214ENST00000477596 SLC16A2P36021 539 aa26.27■■□□□ 1.8
SF1-214ENST00000477596 SLC4A3P48751 1232 aa26.27■■□□□ 1.8
SF1-214ENST00000477596 NT5C2P49902 561 aa26.27■■□□□ 1.8
SF1-214ENST00000477596 FAM160B2Q86V87 743 aa26.27■■□□□ 1.8
SF1-214ENST00000477596 NPLOC4Q8TAT6 608 aa26.27■■□□□ 1.8
SF1-214ENST00000477596 TEX13BQ9BXU2 312 aa26.27■■□□□ 1.8
SF1-214ENST00000477596 FLRT1Q9NZU1 646 aa26.27■■□□□ 1.8
SF1-214ENST00000477596 SLC25A27O95847 323 aa26.26■■□□□ 1.79
SF1-214ENST00000477596 ZKSCAN1P17029 563 aaPredicted RBP26.26■■□□□ 1.79
SF1-214ENST00000477596 TAL1P17542 331 aaPredicted RBP26.26■■□□□ 1.79
SF1-214ENST00000477596 COL9A3Q14050 684 aaPredicted RBP26.26■■□□□ 1.79
SF1-214ENST00000477596 CHURC1Q8WUH1 139 aa26.26■■□□□ 1.79
SF1-214ENST00000477596 UBAC1Q9BSL1 405 aa26.26■■□□□ 1.79
SF1-214ENST00000477596 RNF208Q9H0X6 261 aa26.26■■□□□ 1.79
SF1-214ENST00000477596 PRR12Q9ULL5 1215 aa26.26■■□□□ 1.79
SF1-214ENST00000477596 CTDP1Q9Y5B0 961 aaPredicted RBP26.26■■□□□ 1.79
SF1-214ENST00000477596 SLC27A2O14975 620 aa26.25■■□□□ 1.79
SF1-214ENST00000477596 COBLO75128 1261 aa26.25■■□□□ 1.79
SF1-214ENST00000477596 SNHG28P0DPA3 235 aa26.25■■□□□ 1.79
SF1-214ENST00000477596 TRDNQ13061 729 aa26.25■■□□□ 1.79
SF1-214ENST00000477596 SEC23AQ15436 765 aa26.25■■□□□ 1.79
SF1-214ENST00000477596 CASC1Q6TDU7 716 aa26.25■■□□□ 1.79
SF1-214ENST00000477596 CHST3Q7LGC8 479 aa26.25■■□□□ 1.79
SF1-214ENST00000477596 PNMA1Q8ND90 353 aa26.25■■□□□ 1.79
SF1-214ENST00000477596 ANKS1AQ92625 1134 aa26.25■■□□□ 1.79
SF1-214ENST00000477596 KAT14Q9H8E8 782 aa26.25■■□□□ 1.79
SF1-214ENST00000477596 ZNF536O15090 1300 aa26.24■■□□□ 1.79
SF1-214ENST00000477596 ATP2A1O14983 1001 aa26.24■■□□□ 1.79
SF1-214ENST00000477596 PLA2G6O60733 806 aa26.24■■□□□ 1.79
SF1-214ENST00000477596 GOLGA8HP0CJ92 632 aa26.24■■□□□ 1.79
SF1-214ENST00000477596 ZNF543Q08ER8 600 aa26.24■■□□□ 1.79
SF1-214ENST00000477596 CCDC178Q5BJE1 867 aa26.24■■□□□ 1.79
SF1-214ENST00000477596 CREB3L3Q68CJ9 461 aa26.24■■□□□ 1.79
SF1-214ENST00000477596 CCDC174Q6PII3 467 aa26.24■■□□□ 1.79
SF1-214ENST00000477596 RALYLQ86SE5 291 aaKnown RBP26.24■■□□□ 1.79
SF1-214ENST00000477596 NCOA7Q8NI08 942 aa26.24■■□□□ 1.79
SF1-214ENST00000477596 SHISA4Q96DD7 197 aa26.24■■□□□ 1.79
SF1-214ENST00000477596 ZNFX1Q9P2E3 1918 aaKnown RBP26.24■■□□□ 1.79
SF1-214ENST00000477596 HOXC6P09630 235 aa26.23■■□□□ 1.79
SF1-214ENST00000477596 PRKAR2AP13861 404 aaKnown RBP26.23■■□□□ 1.79
SF1-214ENST00000477596 ANTXR2P58335 489 aa26.23■■□□□ 1.79
SF1-214ENST00000477596 NECTIN1Q15223 517 aa26.23■■□□□ 1.79
SF1-214ENST00000477596 MB21D2Q8IYB1 491 aaPredicted RBP26.23■■□□□ 1.79
SF1-214ENST00000477596 AGBL1Q96MI9 1066 aa26.23■■□□□ 1.79
SF1-214ENST00000477596 MMP19Q99542 508 aa26.23■■□□□ 1.79
SF1-214ENST00000477596 CPVLQ9H3G5 476 aa26.23■■□□□ 1.79
SF1-214ENST00000477596 SENP2Q9HC62 589 aa26.23■■□□□ 1.79
SF1-214ENST00000477596 STRNO43815 780 aa26.22■■□□□ 1.79
SF1-214ENST00000477596 PGK2P07205 417 aa26.22■■□□□ 1.79
SF1-214ENST00000477596 FCER1AP12319 257 aa26.22■■□□□ 1.79
SF1-214ENST00000477596 SYDE2Q5VT97 1194 aa26.22■■□□□ 1.79
SF1-214ENST00000477596 BTNL9Q6UXG8 535 aa26.22■■□□□ 1.79
SF1-214ENST00000477596 DPP9Q86TI2 863 aa26.22■■□□□ 1.79
SF1-214ENST00000477596 HOMER2Q9NSB8 354 aa26.22■■□□□ 1.79
SF1-214ENST00000477596 COPB2P35606 906 aa26.21■■□□□ 1.79
SF1-214ENST00000477596 OAZ1P54368 228 aa26.21■■□□□ 1.79
SF1-214ENST00000477596 IFIT1BQ5T764 474 aaKnown RBP26.21■■□□□ 1.79
SF1-214ENST00000477596 MAP3K21Q5TCX8 1036 aa26.21■■□□□ 1.79
SF1-214ENST00000477596 ABRAQ8N0Z2 381 aa26.21■■□□□ 1.79
SF1-214ENST00000477596 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.21■■□□□ 1.795e-7■■■■□ 24.8
SF1-214ENST00000477596 PLXNA1Q9UIW2 1896 aa26.2■■□□□ 1.78
SF1-214ENST00000477596 GJB1P08034 283 aa26.2■■□□□ 1.78
SF1-214ENST00000477596 MLLT1Q03111 559 aaPredicted RBP26.2■■□□□ 1.78
SF1-214ENST00000477596 CACNB2Q08289 660 aaPredicted RBP26.2■■□□□ 1.78
SF1-214ENST00000477596 TRMT44Q8IYL2 757 aaKnown RBP26.2■■□□□ 1.78
SF1-214ENST00000477596 PAK6Q9NQU5 681 aaPredicted RBP26.2■■□□□ 1.78
SF1-214ENST00000477596 SMCHD1A6NHR9 2005 aa26.2■■□□□ 1.78
SF1-214ENST00000477596 TNRC18O15417 2968 aaPredicted RBP26.2■■□□□ 1.78
SF1-214ENST00000477596 MKI67P46013 3256 aaKnown RBP26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms