RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 IKQ13123 557 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-221ENST00000477561 RIOX2Q8IUF8 465 aa9.77□□□□□ -0.85
HDAC6-221ENST00000477561 SHCBP1Q8NEM2 672 aa9.77□□□□□ -0.85
HDAC6-221ENST00000477561 REPS2Q8NFH8 660 aa9.77□□□□□ -0.85
HDAC6-221ENST00000477561 STAG1Q8WVM7 1258 aa9.77□□□□□ -0.85
HDAC6-221ENST00000477561 ZKSCAN3Q9BRR0 538 aa9.77□□□□□ -0.85
HDAC6-221ENST00000477561 MROH8Q9H579 483 aa9.77□□□□□ -0.85
HDAC6-221ENST00000477561 RAVER2Q9HCJ3 691 aaKnown RBP9.77□□□□□ -0.85
HDAC6-221ENST00000477561 PAK6Q9NQU5 681 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-221ENST00000477561 FEM1BQ9UK73 627 aa9.77□□□□□ -0.85
HDAC6-221ENST00000477561 ZNF214Q9UL59 606 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-221ENST00000477561 NEDD4P46934 1319 aa9.77□□□□□ -0.85
HDAC6-221ENST00000477561 A0A0G2JMZ2 1700 aa9.76□□□□□ -0.85
HDAC6-221ENST00000477561 MYH4Q9Y623 1939 aa9.76□□□□□ -0.85
HDAC6-221ENST00000477561 STRNO43815 780 aa9.76□□□□□ -0.85
HDAC6-221ENST00000477561 SLC25A27O95847 323 aa9.76□□□□□ -0.85
HDAC6-221ENST00000477561 PGK2P07205 417 aa9.76□□□□□ -0.85
HDAC6-221ENST00000477561 HOXC6P09630 235 aa9.76□□□□□ -0.85
HDAC6-221ENST00000477561 FCER1AP12319 257 aa9.76□□□□□ -0.85
HDAC6-221ENST00000477561 CNGA1P29973 690 aa9.76□□□□□ -0.85
HDAC6-221ENST00000477561 SNAP25P60880 206 aa9.76□□□□□ -0.85
HDAC6-221ENST00000477561 IMMTQ16891 758 aaKnown RBP9.76□□□□□ -0.85
HDAC6-221ENST00000477561 CCDC96Q2M329 555 aa9.76□□□□□ -0.85
HDAC6-221ENST00000477561 PPP4R3BQ5MIZ7 849 aa9.76□□□□□ -0.85
HDAC6-221ENST00000477561 MAP3K21Q5TCX8 1036 aa9.76□□□□□ -0.85
HDAC6-221ENST00000477561 MFSD14CQ5VZR4 134 aa9.76□□□□□ -0.85
HDAC6-221ENST00000477561 SNRNP48Q6IEG0 339 aaKnown RBP9.76□□□□□ -0.85
HDAC6-221ENST00000477561 TRMT44Q8IYL2 757 aaKnown RBP9.76□□□□□ -0.85
HDAC6-221ENST00000477561 MMP19Q99542 508 aa9.76□□□□□ -0.85
HDAC6-221ENST00000477561 TMEM47Q9BQJ4 181 aa9.76□□□□□ -0.85
HDAC6-221ENST00000477561 DSCC1Q9BVC3 393 aa9.76□□□□□ -0.85
HDAC6-221ENST00000477561 RNF41Q9H4P4 317 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-221ENST00000477561 SYNPO2Q9UMS6 1093 aa9.76□□□□□ -0.85
HDAC6-221ENST00000477561 RIPK3Q9Y572 518 aa9.76□□□□□ -0.85
HDAC6-221ENST00000477561 COL11A1P12107 1806 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-221ENST00000477561 PARP14Q460N5 1801 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 B4E1Z4 1266 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 ABCB7O75027 752 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 KDM4AO75164 1064 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 FARP2O94887 1054 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-221ENST00000477561 TOP1P11387 765 aaKnown RBP9.75□□□□□ -0.85
HDAC6-221ENST00000477561 STAT2P52630 851 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 PTH1RQ03431 593 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 KCTD2Q14681 263 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 PRAMEF19Q5SWL8 479 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 TTBK2Q6IQ55 1244 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 RCSD1Q6JBY9 416 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 CHURC1Q8WUH1 139 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 RUFY2Q8WXA3 655 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 ESR2Q92731 530 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 GMCL1Q96IK5 515 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 PAWRQ96IZ0 340 aaKnown RBP9.75□□□□□ -0.85
HDAC6-221ENST00000477561 TEX13BQ9BXU2 312 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 CRISPLD2Q9H0B8 497 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 SLC38A10Q9HBR0 1119 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 GPCPD1Q9NPB8 672 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 TCP11L1Q9NUJ3 509 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 CTNNA3Q9UI47 895 aa9.75□□□□□ -0.85
HDAC6-221ENST00000477561 FRMPD2Q68DX3 1309 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-221ENST00000477561 PCP11498 1178 aaKnown RBP9.74□□□□□ -0.85
HDAC6-221ENST00000477561 TAL1P17542 331 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-221ENST00000477561 SLC16A2P36021 539 aa9.74□□□□□ -0.85
HDAC6-221ENST00000477561 NOVP48745 357 aa9.74□□□□□ -0.85
HDAC6-221ENST00000477561 ANO1Q5XXA6 986 aa9.74□□□□□ -0.85
HDAC6-221ENST00000477561 CCDC174Q6PII3 467 aa9.74□□□□□ -0.85
HDAC6-221ENST00000477561 UBE2Q1Q7Z7E8 422 aa9.74□□□□□ -0.85
HDAC6-221ENST00000477561 FAM160B2Q86V87 743 aa9.74□□□□□ -0.85
HDAC6-221ENST00000477561 ABRAQ8N0Z2 381 aa9.74□□□□□ -0.85
HDAC6-221ENST00000477561 TRPV1Q8NER1 839 aa9.74□□□□□ -0.85
HDAC6-221ENST00000477561 DIS3LQ8TF46 1054 aaKnown RBP9.74□□□□□ -0.85
HDAC6-221ENST00000477561 DPF3Q92784 378 aa9.74□□□□□ -0.85
HDAC6-221ENST00000477561 MAML3Q96JK9 1138 aa9.74□□□□□ -0.85
HDAC6-221ENST00000477561 AGBL1Q96MI9 1066 aa9.74□□□□□ -0.85
HDAC6-221ENST00000477561 HOMER2Q9NSB8 354 aa9.74□□□□□ -0.85
HDAC6-221ENST00000477561 SLC5A4Q9NY91 659 aa9.74□□□□□ -0.85
HDAC6-221ENST00000477561 PRR12Q9ULL5 1215 aa9.74□□□□□ -0.85
HDAC6-221ENST00000477561 ATP2A1O14983 1001 aa9.73□□□□□ -0.85
HDAC6-221ENST00000477561 SGSM2O43147 1006 aa9.73□□□□□ -0.85
HDAC6-221ENST00000477561 ZNF792Q3KQV3 632 aa9.73□□□□□ -0.85
HDAC6-221ENST00000477561 PRPF38BQ5VTL8 546 aaKnown RBP9.73□□□□□ -0.85
HDAC6-221ENST00000477561 OLFML2BQ68BL8 750 aa9.73□□□□□ -0.85
HDAC6-221ENST00000477561 LHX8Q68G74 356 aa9.73□□□□□ -0.85
HDAC6-221ENST00000477561 DCAF4Q8WV16 495 aa9.73□□□□□ -0.85
HDAC6-221ENST00000477561 DDX11Q96FC9 970 aa9.73□□□□□ -0.85
HDAC6-221ENST00000477561 ZSWIM5Q9P217 1185 aa9.73□□□□□ -0.85
HDAC6-221ENST00000477561 OGDHLQ9ULD0 1010 aa9.73□□□□□ -0.85
HDAC6-221ENST00000477561 ZNF536O15090 1300 aa9.73□□□□□ -0.85
HDAC6-221ENST00000477561 RAD50Q92878 1312 aa9.73□□□□□ -0.85
HDAC6-221ENST00000477561 PLA2G6O60733 806 aa9.72□□□□□ -0.85
HDAC6-221ENST00000477561 IGHA2P01877 340 aa9.72□□□□□ -0.85
HDAC6-221ENST00000477561 GOLGA8HP0CJ92 632 aa9.72□□□□□ -0.85
HDAC6-221ENST00000477561 PDHBP11177 359 aa9.72□□□□□ -0.85
HDAC6-221ENST00000477561 ALAS1P13196 640 aa9.72□□□□□ -0.85
HDAC6-221ENST00000477561 CYBAP13498 195 aa9.72□□□□□ -0.85
HDAC6-221ENST00000477561 COPB2P35606 906 aa9.72□□□□□ -0.85
HDAC6-221ENST00000477561 MNX1P50219 401 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-221ENST00000477561 NECAB2Q7Z6G3 386 aa9.72□□□□□ -0.85
HDAC6-221ENST00000477561 IQCA1Q86XH1 822 aa9.72□□□□□ -0.85
HDAC6-221ENST00000477561 ANKRD35Q8N283 1001 aa9.72□□□□□ -0.85
HDAC6-221ENST00000477561 TTC14Q96N46 770 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms