RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 CREG2Q8IUH2 290 aa11.77□□□□□ -0.52
ABCF1-205ENST00000475993 NCOA7Q8NI08 942 aa11.77□□□□□ -0.52
ABCF1-205ENST00000475993 HINFPQ9BQA5 517 aa11.77□□□□□ -0.52
ABCF1-205ENST00000475993 TFR2Q9UP52 801 aa11.77□□□□□ -0.52
ABCF1-205ENST00000475993 KRT86O43790 486 aa11.77□□□□□ -0.53
ABCF1-205ENST00000475993 SSBP05455 408 aaKnown RBP eCLIP11.77□□□□□ -0.53
ABCF1-205ENST00000475993 NEFHP12036 1026 aa11.77□□□□□ -0.53
ABCF1-205ENST00000475993 APBA1Q02410 837 aa11.77□□□□□ -0.53
ABCF1-205ENST00000475993 GCKRQ14397 625 aa11.77□□□□□ -0.53
ABCF1-205ENST00000475993 KCTD16Q68DU8 428 aa11.77□□□□□ -0.53
ABCF1-205ENST00000475993 RCSD1Q6JBY9 416 aa11.77□□□□□ -0.53
ABCF1-205ENST00000475993 NOSTRINQ8IVI9 506 aa11.77□□□□□ -0.53
ABCF1-205ENST00000475993 FNBP4Q8N3X1 1017 aaPredicted RBP11.77□□□□□ -0.53
ABCF1-205ENST00000475993 EZH1Q92800 747 aaPredicted RBP11.77□□□□□ -0.53
ABCF1-205ENST00000475993 CCDC114Q96M63 670 aa11.77□□□□□ -0.53
ABCF1-205ENST00000475993 SCLT1Q96NL6 688 aa11.77□□□□□ -0.53
ABCF1-205ENST00000475993 PURBQ96QR8 312 aaKnown RBP11.77□□□□□ -0.53
ABCF1-205ENST00000475993 DNAJC7Q99615 494 aa11.77□□□□□ -0.53
ABCF1-205ENST00000475993 KRT14P02533 472 aa11.77□□□□□ -0.53
ABCF1-205ENST00000475993 COPB1P53618 953 aaKnown RBP11.77□□□□□ -0.53
ABCF1-205ENST00000475993 SEC24CP53992 1094 aa11.77□□□□□ -0.53
ABCF1-205ENST00000475993 SH3RF1Q7Z6J0 888 aa11.77□□□□□ -0.53
ABCF1-205ENST00000475993 IQCKQ8N0W5 287 aa11.77□□□□□ -0.53
ABCF1-205ENST00000475993 OR8K1Q8NGG5 319 aa11.77□□□□□ -0.53
ABCF1-205ENST00000475993 NUP133Q8WUM0 1156 aa11.77□□□□□ -0.53
ABCF1-205ENST00000475993 BLOC1S6Q9UL45 172 aa11.77□□□□□ -0.53
ABCF1-205ENST00000475993 DIP2BQ9P265 1576 aa11.76□□□□□ -0.53
ABCF1-205ENST00000475993 MDH1P40925 334 aaKnown RBP11.76□□□□□ -0.53
ABCF1-205ENST00000475993 METAP2P50579 478 aaKnown RBP eCLIP11.76□□□□□ -0.538e-6■■□□□ 13.7
ABCF1-205ENST00000475993 KRT83P78385 493 aa11.76□□□□□ -0.53
ABCF1-205ENST00000475993 LAMB3Q13751 1172 aa11.76□□□□□ -0.53
ABCF1-205ENST00000475993 TRIM29Q14134 588 aa11.76□□□□□ -0.53
ABCF1-205ENST00000475993 CCDC121Q6ZUS5 278 aa11.76□□□□□ -0.53
ABCF1-205ENST00000475993 C1orf131Q8NDD1 294 aaKnown RBP11.76□□□□□ -0.53
ABCF1-205ENST00000475993 PHKBQ93100 1093 aa11.76□□□□□ -0.53
ABCF1-205ENST00000475993 OSBP2Q969R2 916 aa11.76□□□□□ -0.53
ABCF1-205ENST00000475993 SRPRBQ9Y5M8 271 aaKnown RBP11.76□□□□□ -0.53
ABCF1-205ENST00000475993 PIK3C2AO00443 1686 aa11.76□□□□□ -0.53
ABCF1-205ENST00000475993 ZNF233A6NK53 670 aa11.76□□□□□ -0.53
ABCF1-205ENST00000475993 NR1D1P20393 614 aa11.76□□□□□ -0.53
ABCF1-205ENST00000475993 IFFO1Q0D2I5 559 aa11.76□□□□□ -0.53
ABCF1-205ENST00000475993 RABL6Q3YEC7 729 aaPredicted RBP11.76□□□□□ -0.53
ABCF1-205ENST00000475993 TSHZ1Q6ZSZ6 1077 aa11.76□□□□□ -0.53
ABCF1-205ENST00000475993 USP49Q70CQ1 688 aa11.76□□□□□ -0.53
ABCF1-205ENST00000475993 CD302Q8IX05 232 aa11.76□□□□□ -0.53
ABCF1-205ENST00000475993 USHBP1Q8N6Y0 703 aa11.76□□□□□ -0.53
ABCF1-205ENST00000475993 GSDMAQ96QA5 445 aa11.76□□□□□ -0.53
ABCF1-205ENST00000475993 TSGA10Q9BZW7 698 aa11.76□□□□□ -0.53
ABCF1-205ENST00000475993 VPS16Q9H269 839 aa11.76□□□□□ -0.53
ABCF1-205ENST00000475993 TTC26A0AVF1 554 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 PRAMEF22A3QJZ6 481 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 RCCD1A6NED2 376 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 DNM1LO00429 736 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 RTN3O95197 1032 aaPredicted RBP11.75□□□□□ -0.53
ABCF1-205ENST00000475993 FGAP02671 866 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 IDEP14735 1019 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 SPAG1Q07617 926 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 DPYDQ12882 1025 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 NTRK3Q16288 839 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 WDR59Q6PJI9 974 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 RALYLQ86SE5 291 aaKnown RBP11.75□□□□□ -0.53
ABCF1-205ENST00000475993 SMYD4Q8IYR2 804 aaPredicted RBP11.75□□□□□ -0.53
ABCF1-205ENST00000475993 B4GALNT2Q8NHY0 566 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 TBC1D5Q92609 795 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 CYFIP2Q96F07 1278 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 OSBPL7Q9BZF2 842 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 YIPF3Q9GZM5 350 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 LACRTQ9GZZ8 138 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 JADE2Q9NQC1 790 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 DDX21Q9NR30 783 aaKnown RBP eCLIP11.75□□□□□ -0.53
ABCF1-205ENST00000475993 STIM2Q9P246 746 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 SNX12Q9UMY4 172 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 UBN2Q6ZU65 1347 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 AIMP1Q12904 312 aaKnown RBP11.75□□□□□ -0.53
ABCF1-205ENST00000475993 XRCC4Q13426 336 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 TTF1Q15361 905 aaPredicted RBP11.75□□□□□ -0.53
ABCF1-205ENST00000475993 SPRED3Q2MJR0 410 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 HAUS3Q68CZ6 603 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 SPATA4Q8NEY3 305 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 POLD4Q9HCU8 107 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 HAUS2Q9NVX0 235 aa11.75□□□□□ -0.53
ABCF1-205ENST00000475993 ANGEL1Q9UNK9 670 aaKnown RBP11.75□□□□□ -0.53
ABCF1-205ENST00000475993 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.75□□□□□ -0.53
ABCF1-205ENST00000475993 LMO7Q8WWI1 1683 aa11.74□□□□□ -0.53
ABCF1-205ENST00000475993 MGRN1O60291 552 aa11.74□□□□□ -0.53
ABCF1-205ENST00000475993 RANBP6O60518 1105 aaKnown RBP11.74□□□□□ -0.53
ABCF1-205ENST00000475993 TPP2P29144 1249 aaPredicted RBP11.74□□□□□ -0.53
ABCF1-205ENST00000475993 SLC7A5Q01650 507 aa11.74□□□□□ -0.53
ABCF1-205ENST00000475993 PDIA6Q15084 440 aa11.74□□□□□ -0.53
ABCF1-205ENST00000475993 ANKRD20A8PQ5CZ79 823 aa11.74□□□□□ -0.53
ABCF1-205ENST00000475993 CAPRIN2Q6IMN6 1127 aaKnown RBP11.74□□□□□ -0.53
ABCF1-205ENST00000475993 PPP4R3AQ6IN85 833 aa11.74□□□□□ -0.53
ABCF1-205ENST00000475993 TAX1BP1Q86VP1 789 aa11.74□□□□□ -0.53
ABCF1-205ENST00000475993 RSRC1Q96IZ7 334 aaKnown RBP11.74□□□□□ -0.53
ABCF1-205ENST00000475993 TAB2Q9NYJ8 693 aa11.74□□□□□ -0.53
ABCF1-205ENST00000475993 SPEF2Q9C093 1822 aa11.74□□□□□ -0.53
ABCF1-205ENST00000475993 A0A087X0B3 334 aa11.74□□□□□ -0.53
ABCF1-205ENST00000475993 PRLRP16471 622 aa11.74□□□□□ -0.53
ABCF1-205ENST00000475993 MEA1Q16626 185 aa11.74□□□□□ -0.53
ABCF1-205ENST00000475993 RILPL1Q5EBL4 403 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms