RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 ECE1P42892 770 aa12.42□□□□□ -0.42
SP140-208ENST00000473711 ZNF543Q08ER8 600 aa12.42□□□□□ -0.42
SP140-208ENST00000473711 PRKG1Q13976 671 aa12.42□□□□□ -0.42
SP140-208ENST00000473711 TTBK2Q6IQ55 1244 aa12.42□□□□□ -0.42
SP140-208ENST00000473711 FAM173BQ6P4H8 233 aa12.42□□□□□ -0.42
SP140-208ENST00000473711 KCTD1Q719H9 257 aa12.42□□□□□ -0.42
SP140-208ENST00000473711 KRT26Q7Z3Y9 468 aa12.42□□□□□ -0.42
SP140-208ENST00000473711 DCAF4Q8WV16 495 aa12.42□□□□□ -0.42
SP140-208ENST00000473711 ZSCAN16Q9H4T2 348 aaPredicted RBP12.42□□□□□ -0.42
SP140-208ENST00000473711 ZNF112Q9UJU3 913 aa12.42□□□□□ -0.42
SP140-208ENST00000473711 KCNJ14Q9UNX9 436 aa12.42□□□□□ -0.42
SP140-208ENST00000473711 ATP6V1DQ9Y5K8 247 aa12.42□□□□□ -0.42
SP140-208ENST00000473711 GREB1LQ9C091 1923 aaPredicted RBP12.42□□□□□ -0.42
SP140-208ENST00000473711 USP2O75604 605 aaPredicted RBP12.41□□□□□ -0.42
SP140-208ENST00000473711 NDUFB10O96000 172 aa12.41□□□□□ -0.42
SP140-208ENST00000473711 VEGFAP15692 232 aaPredicted RBP12.41□□□□□ -0.42
SP140-208ENST00000473711 SMARCA1P28370 1054 aa12.41□□□□□ -0.42
SP140-208ENST00000473711 SLC1A4P43007 532 aa12.41□□□□□ -0.42
SP140-208ENST00000473711 DNM1Q05193 864 aaKnown RBP12.41□□□□□ -0.42
SP140-208ENST00000473711 GMCL1P1Q8NEA9 526 aa12.41□□□□□ -0.42
SP140-208ENST00000473711 ZC3H15Q8WU90 426 aaKnown RBP12.41□□□□□ -0.42
SP140-208ENST00000473711 WRNIP1Q96S55 665 aa12.41□□□□□ -0.42
SP140-208ENST00000473711 SPZ1Q9BXG8 430 aa12.41□□□□□ -0.42
SP140-208ENST00000473711 RRAGCQ9HB90 399 aa12.41□□□□□ -0.42
SP140-208ENST00000473711 PLSCR2Q9NRY7 297 aa12.41□□□□□ -0.42
SP140-208ENST00000473711 VPS54Q9P1Q0 977 aa12.41□□□□□ -0.42
SP140-208ENST00000473711 TMX2Q9Y320 296 aa12.41□□□□□ -0.42
SP140-208ENST00000473711 GOLGB1Q14789 3259 aaKnown RBP12.41□□□□□ -0.42
SP140-208ENST00000473711 GOLGA6L22H0YM25 854 aa12.4□□□□□ -0.42
SP140-208ENST00000473711 SCG2P13521 617 aa12.4□□□□□ -0.42
SP140-208ENST00000473711 XBP1P17861 261 aa12.4□□□□□ -0.42
SP140-208ENST00000473711 NCLP19338 710 aaKnown RBP12.4□□□□□ -0.42
SP140-208ENST00000473711 SLC16A2P36021 539 aa12.4□□□□□ -0.42
SP140-208ENST00000473711 ZYXQ15942 572 aaKnown RBP12.4□□□□□ -0.42
SP140-208ENST00000473711 PFKFB3Q16875 520 aaPredicted RBP12.4□□□□□ -0.42
SP140-208ENST00000473711 KIAA1755Q5JYT7 1200 aa12.4□□□□□ -0.42
SP140-208ENST00000473711 GPATCH4Q5T3I0 446 aaKnown RBP12.4□□□□□ -0.42
SP140-208ENST00000473711 PNMA8AQ86V59 439 aaPredicted RBP12.4□□□□□ -0.42
SP140-208ENST00000473711 SPICE1Q8N0Z3 855 aa12.4□□□□□ -0.42
SP140-208ENST00000473711 RGS22Q8NE09 1264 aa12.4□□□□□ -0.42
SP140-208ENST00000473711 ZKSCAN4Q969J2 545 aaPredicted RBP12.4□□□□□ -0.42
SP140-208ENST00000473711 RRP36Q96EU6 259 aaKnown RBP12.4□□□□□ -0.42
SP140-208ENST00000473711 MS4A4AQ96JQ5 239 aa12.4□□□□□ -0.42
SP140-208ENST00000473711 PIGSQ96S52 555 aa12.4□□□□□ -0.42
SP140-208ENST00000473711 NUP88Q99567 741 aaPredicted RBP12.4□□□□□ -0.42
SP140-208ENST00000473711 GLIS2Q9BZE0 524 aaPredicted RBP12.4□□□□□ -0.42
SP140-208ENST00000473711 RIOX1Q9H6W3 641 aa12.4□□□□□ -0.42
SP140-208ENST00000473711 GINM1Q9NU53 330 aa12.4□□□□□ -0.42
SP140-208ENST00000473711 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.4□□□□□ -0.42
SP140-208ENST00000473711 RBM27Q9P2N5 1060 aaKnown RBP12.4□□□□□ -0.42
SP140-208ENST00000473711 TFIP11Q9UBB9 837 aaKnown RBP12.4□□□□□ -0.42
SP140-208ENST00000473711 CNPY2Q9Y2B0 182 aa12.4□□□□□ -0.42
SP140-208ENST00000473711 KIF28PB7ZC32 967 aa12.39□□□□□ -0.43
SP140-208ENST00000473711 PRPF40AO75400 957 aaKnown RBP12.39□□□□□ -0.43
SP140-208ENST00000473711 BMP3P12645 472 aa12.39□□□□□ -0.43
SP140-208ENST00000473711 KIF23Q02241 960 aaPredicted RBP12.39□□□□□ -0.43
SP140-208ENST00000473711 GNL2Q13823 731 aaKnown RBP12.39□□□□□ -0.43
SP140-208ENST00000473711 SAFBQ15424 915 aaKnown RBP eCLIP12.39□□□□□ -0.43
SP140-208ENST00000473711 HOMER1Q86YM7 354 aa12.39□□□□□ -0.43
SP140-208ENST00000473711 SCYL3Q8IZE3 742 aa12.39□□□□□ -0.43
SP140-208ENST00000473711 ADGRF4Q8IZF3 695 aa12.39□□□□□ -0.43
SP140-208ENST00000473711 GPKOWQ92917 476 aaPredicted RBP eCLIP12.39□□□□□ -0.43
SP140-208ENST00000473711 SHISA4Q96DD7 197 aa12.39□□□□□ -0.43
SP140-208ENST00000473711 KLRG1Q96E93 195 aa12.39□□□□□ -0.43
SP140-208ENST00000473711 GMCL1Q96IK5 515 aa12.39□□□□□ -0.43
SP140-208ENST00000473711 SH2D4AQ9H788 454 aa12.39□□□□□ -0.43
SP140-208ENST00000473711 JMJD4Q9H9V9 463 aa12.39□□□□□ -0.43
SP140-208ENST00000473711 GDPD2Q9HCC8 539 aa12.39□□□□□ -0.43
SP140-208ENST00000473711 GOPCQ9HD26 462 aa12.39□□□□□ -0.43
SP140-208ENST00000473711 PICK1Q9NRD5 415 aa12.39□□□□□ -0.43
SP140-208ENST00000473711 SYNPO2Q9UMS6 1093 aa12.39□□□□□ -0.43
SP140-208ENST00000473711 POLR2AP24928 1970 aaKnown RBP12.38□□□□□ -0.43
SP140-208ENST00000473711 DDX11L8A8MPP1 907 aa12.38□□□□□ -0.43
SP140-208ENST00000473711 USP17L10C9JJH3 530 aa12.38□□□□□ -0.43
SP140-208ENST00000473711 TMEM232C9JQI7 657 aa12.38□□□□□ -0.43
SP140-208ENST00000473711 MMP1P03956 469 aa12.38□□□□□ -0.43
SP140-208ENST00000473711 NLRP5P59047 1200 aa12.38□□□□□ -0.43
SP140-208ENST00000473711 MAP3K9P80192 1104 aa12.38□□□□□ -0.43
SP140-208ENST00000473711 HEATR3Q7Z4Q2 680 aa12.38□□□□□ -0.43
SP140-208ENST00000473711 CDCA5Q96FF9 252 aa12.38□□□□□ -0.43
SP140-208ENST00000473711 FEZ1Q99689 392 aa12.38□□□□□ -0.43
SP140-208ENST00000473711 VCPKMTQ9H867 229 aa12.38□□□□□ -0.43
SP140-208ENST00000473711 SEC63Q9UGP8 760 aaKnown RBP12.38□□□□□ -0.43
SP140-208ENST00000473711 SSC5DA1L4H1 1573 aa12.38□□□□□ -0.43
SP140-208ENST00000473711 MYH4Q9Y623 1939 aa12.37□□□□□ -0.43
SP140-208ENST00000473711 BTBD18B2RXH4 712 aa12.37□□□□□ -0.43
SP140-208ENST00000473711 PPP1R12BO60237 982 aaPredicted RBP12.37□□□□□ -0.43
SP140-208ENST00000473711 PTPRAP18433 802 aa12.37□□□□□ -0.43
SP140-208ENST00000473711 NF2P35240 595 aa12.37□□□□□ -0.43
SP140-208ENST00000473711 KRT85P78386 507 aa12.37□□□□□ -0.43
SP140-208ENST00000473711 SPP2Q13103 211 aa12.37□□□□□ -0.43
SP140-208ENST00000473711 IKQ13123 557 aaPredicted RBP12.37□□□□□ -0.43
SP140-208ENST00000473711 FAM83BQ5T0W9 1011 aa12.37□□□□□ -0.43
SP140-208ENST00000473711 WWC2Q6AWC2 1192 aa12.37□□□□□ -0.43
SP140-208ENST00000473711 DIS3L2Q8IYB7 885 aaKnown RBP12.37□□□□□ -0.43
SP140-208ENST00000473711 OXER1Q8TDS5 423 aa12.37□□□□□ -0.43
SP140-208ENST00000473711 ZNF396Q96N95 335 aaPredicted RBP12.37□□□□□ -0.43
SP140-208ENST00000473711 PHF20Q9BVI0 1012 aa12.37□□□□□ -0.43
SP140-208ENST00000473711 AS3MTQ9HBK9 375 aa12.37□□□□□ -0.43
SP140-208ENST00000473711 LMBRD1Q9NUN5 540 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms