RNA–Protein interactions for RNA: ENST00000473270.1

APTX-218, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-218ENST00000473270 KBTBD3Q8NAB2 608 aa23.22■■□□□ 1.31
APTX-218ENST00000473270 NUP133Q8WUM0 1156 aa23.22■■□□□ 1.31
APTX-218ENST00000473270 APPBP2Q92624 585 aa23.22■■□□□ 1.31
APTX-218ENST00000473270 SALL3Q9BXA9 1300 aa23.22■■□□□ 1.31
APTX-218ENST00000473270 PLEKHM2Q8IWE5 1019 aa23.21■■□□□ 1.31
APTX-218ENST00000473270 BADQ92934 168 aa23.21■■□□□ 1.31
APTX-218ENST00000473270 FAM161BQ96MY7 647 aa23.21■■□□□ 1.31
APTX-218ENST00000473270 SPC25Q9HBM1 224 aa23.21■■□□□ 1.31
APTX-218ENST00000473270 CLIP2Q9UDT6 1046 aa23.21■■□□□ 1.31
APTX-218ENST00000473270 COL6A3P12111 3177 aa23.2■■□□□ 1.3
APTX-218ENST00000473270 F5H6K3 240 aa23.2■■□□□ 1.3
APTX-218ENST00000473270 POTEB2H3BUK9 544 aa23.2■■□□□ 1.3
APTX-218ENST00000473270 RNF113AO15541 343 aaKnown RBP23.2■■□□□ 1.3
APTX-218ENST00000473270 PGK1P00558 417 aa23.2■■□□□ 1.3
APTX-218ENST00000473270 KLRC3Q07444 240 aa23.2■■□□□ 1.3
APTX-218ENST00000473270 SNX17Q15036 470 aa23.2■■□□□ 1.3
APTX-218ENST00000473270 ZNF792Q3KQV3 632 aa23.2■■□□□ 1.3
APTX-218ENST00000473270 TSHZ3Q63HK5 1081 aa23.2■■□□□ 1.3
APTX-218ENST00000473270 ZNF214Q9UL59 606 aaPredicted RBP23.2■■□□□ 1.3
APTX-218ENST00000473270 FAM184BQ9ULE4 1060 aa23.2■■□□□ 1.3
APTX-218ENST00000473270 PHF24Q9UPV7 400 aa23.2■■□□□ 1.3
APTX-218ENST00000473270 SMIM22K7EJ46 135 aa23.19■■□□□ 1.3
APTX-218ENST00000473270 CHGBP05060 677 aa23.19■■□□□ 1.3
APTX-218ENST00000473270 CLTBP09497 229 aa23.19■■□□□ 1.3
APTX-218ENST00000473270 RAG1P15918 1043 aa23.19■■□□□ 1.3
APTX-218ENST00000473270 RASA1P20936 1047 aa23.19■■□□□ 1.3
APTX-218ENST00000473270 TLE2Q04725 743 aa23.19■■□□□ 1.3
APTX-218ENST00000473270 PDE4BQ07343 736 aa23.19■■□□□ 1.3
APTX-218ENST00000473270 CPXCR1Q8N123 301 aa23.19■■□□□ 1.3
APTX-218ENST00000473270 PI4K2BQ8TCG2 481 aa23.19■■□□□ 1.3
APTX-218ENST00000473270 KIFC2Q96AC6 838 aa23.19■■□□□ 1.3
APTX-218ENST00000473270 OSBPL3Q9H4L5 887 aa23.19■■□□□ 1.3
APTX-218ENST00000473270 PDLIM7Q9NR12 457 aa23.19■■□□□ 1.3
APTX-218ENST00000473270 FBXO40Q9UH90 709 aa23.19■■□□□ 1.3
APTX-218ENST00000473270 GTF3C3Q9Y5Q9 886 aa23.19■■□□□ 1.3
APTX-218ENST00000473270 GSG1L2A8MUP6 293 aa23.18■■□□□ 1.3
APTX-218ENST00000473270 DCDC2CA8MYV0 355 aa23.18■■□□□ 1.3
APTX-218ENST00000473270 PQBP1O60828 265 aaKnown RBP23.18■■□□□ 1.3
APTX-218ENST00000473270 PDE4AP27815 886 aa23.18■■□□□ 1.3
APTX-218ENST00000473270 SHHQ15465 462 aa23.18■■□□□ 1.3
APTX-218ENST00000473270 ANKRD35Q8N283 1001 aa23.18■■□□□ 1.3
APTX-218ENST00000473270 NUP88Q99567 741 aaPredicted RBP23.18■■□□□ 1.3
APTX-218ENST00000473270 TSEN34Q9BSV6 310 aaKnown RBP23.18■■□□□ 1.3
APTX-218ENST00000473270 FEM1BQ9UK73 627 aa23.18■■□□□ 1.3
APTX-218ENST00000473270 ZHX1Q9UKY1 873 aaPredicted RBP23.18■■□□□ 1.3
APTX-218ENST00000473270 MYH7P12883 1935 aa23.18■■□□□ 1.3
APTX-218ENST00000473270 RLFQ13129 1914 aa23.18■■□□□ 1.3
APTX-218ENST00000473270 SYNGAP1Q96PV0 1343 aa23.17■■□□□ 1.3
APTX-218ENST00000473270 GPAA1O43292 621 aa23.17■■□□□ 1.3
APTX-218ENST00000473270 NDUFB10O96000 172 aa23.17■■□□□ 1.3
APTX-218ENST00000473270 TSPY3P0CV98 308 aa23.17■■□□□ 1.3
APTX-218ENST00000473270 TSPY8P0CW00 308 aa23.17■■□□□ 1.3
APTX-218ENST00000473270 IKQ13123 557 aaPredicted RBP23.17■■□□□ 1.3
APTX-218ENST00000473270 PPP4R3BQ5MIZ7 849 aa23.17■■□□□ 1.3
APTX-218ENST00000473270 VTI1AQ96AJ9 217 aa23.17■■□□□ 1.3
APTX-218ENST00000473270 STARD7Q9NQZ5 370 aa23.17■■□□□ 1.3
APTX-218ENST00000473270 TMEM39AQ9NV64 488 aa23.17■■□□□ 1.3
APTX-218ENST00000473270 A0A1W2PQ45 241 aaPredicted RBP23.16■■□□□ 1.3
APTX-218ENST00000473270 A0A1W2PQY0 241 aa23.16■■□□□ 1.3
APTX-218ENST00000473270 TTLL1O95922 423 aa23.16■■□□□ 1.3
APTX-218ENST00000473270 OSBP2Q969R2 916 aa23.16■■□□□ 1.3
APTX-218ENST00000473270 SYNPO2Q9UMS6 1093 aa23.16■■□□□ 1.3
APTX-218ENST00000473270 MOXD2PA6NHM9 499 aa23.15■■□□□ 1.3
APTX-218ENST00000473270 PATL2C9JE40 543 aaKnown RBP23.15■■□□□ 1.3
APTX-218ENST00000473270 ZNF865P0CJ78 1059 aaPredicted RBP23.15■■□□□ 1.3
APTX-218ENST00000473270 FDX1P10109 184 aa23.15■■□□□ 1.3
APTX-218ENST00000473270 TAL1P17542 331 aaPredicted RBP23.15■■□□□ 1.3
APTX-218ENST00000473270 SMAD3P84022 425 aaKnown RBP23.15■■□□□ 1.3
APTX-218ENST00000473270 REPS2Q8NFH8 660 aa23.15■■□□□ 1.3
APTX-218ENST00000473270 RNPC3Q96LT9 517 aaKnown RBP23.15■■□□□ 1.3
APTX-218ENST00000473270 ROBO3Q96MS0 1386 aa23.14■■□□□ 1.3
APTX-218ENST00000473270 MROH7Q68CQ1 1323 aa23.14■■□□□ 1.3
APTX-218ENST00000473270 TRIM43BA6NCK2 446 aa23.14■■□□□ 1.29
APTX-218ENST00000473270 ATP2A1O14983 1001 aa23.14■■□□□ 1.29
APTX-218ENST00000473270 CCDC174Q6PII3 467 aa23.14■■□□□ 1.29
APTX-218ENST00000473270 SH3RF1Q7Z6J0 888 aa23.14■■□□□ 1.29
APTX-218ENST00000473270 PCSK9Q8NBP7 692 aaKnown RBP23.14■■□□□ 1.29
APTX-218ENST00000473270 CHST13Q8NET6 341 aa23.14■■□□□ 1.29
APTX-218ENST00000473270 TRIM43Q96BQ3 446 aaPredicted RBP23.14■■□□□ 1.29
APTX-218ENST00000473270 GLT1D1Q96MS3 346 aa23.14■■□□□ 1.29
APTX-218ENST00000473270 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.14■■□□□ 1.29
APTX-218ENST00000473270 NAPBQ9H115 298 aa23.14■■□□□ 1.29
APTX-218ENST00000473270 PRDM1O75626 825 aa23.13■■□□□ 1.29
APTX-218ENST00000473270 ACLYP53396 1101 aa23.13■■□□□ 1.29
APTX-218ENST00000473270 OAZ1P54368 228 aa23.13■■□□□ 1.29
APTX-218ENST00000473270 FPGSQ05932 587 aa23.13■■□□□ 1.29
APTX-218ENST00000473270 C9orf50Q5SZB4 431 aa23.13■■□□□ 1.29
APTX-218ENST00000473270 ZNF467Q7Z7K2 595 aaPredicted RBP23.13■■□□□ 1.29
APTX-218ENST00000473270 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.13■■□□□ 1.29
APTX-218ENST00000473270 CEP95Q96GE4 821 aa23.13■■□□□ 1.29
APTX-218ENST00000473270 GUCD1Q96NT3 240 aa23.13■■□□□ 1.29
APTX-218ENST00000473270 FSD1Q9BTV5 496 aa23.13■■□□□ 1.29
APTX-218ENST00000473270 RAVER2Q9HCJ3 691 aaKnown RBP23.13■■□□□ 1.29
APTX-218ENST00000473270 MTMR4Q9NYA4 1195 aa23.13■■□□□ 1.29
APTX-218ENST00000473270 ZNFX1Q9P2E3 1918 aaKnown RBP23.13■■□□□ 1.29
APTX-218ENST00000473270 COL11A1P12107 1806 aaPredicted RBP23.12■■□□□ 1.29
APTX-218ENST00000473270 A0A0C4DFX4 3053 aa23.12■■□□□ 1.29
APTX-218ENST00000473270 TRIM6-TRIM34B2RNG4 842 aa23.12■■□□□ 1.29
APTX-218ENST00000473270 DUSP11O75319 330 aaKnown RBP23.12■■□□□ 1.29
APTX-218ENST00000473270 C6orf222P0C671 652 aaPredicted RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms