RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 ZBTB47Q9UFB7 747 aaPredicted RBP15.81■□□□□ 0.12
CPSF4-210ENST00000469897 PRKAG2Q9UGJ0 569 aa15.81■□□□□ 0.12
CPSF4-210ENST00000469897 NRBP1Q9UHY1 535 aa15.81■□□□□ 0.12
CPSF4-210ENST00000469897 FEM1BQ9UK73 627 aa15.81■□□□□ 0.12
CPSF4-210ENST00000469897 SZT2Q5T011 3432 aa15.8■□□□□ 0.12
CPSF4-210ENST00000469897 ATP2A1O14983 1001 aa15.8■□□□□ 0.12
CPSF4-210ENST00000469897 PGK1P00558 417 aa15.8■□□□□ 0.12
CPSF4-210ENST00000469897 ZNF865P0CJ78 1059 aaPredicted RBP15.8■□□□□ 0.12
CPSF4-210ENST00000469897 RARBP10826 455 aa15.8■□□□□ 0.12
CPSF4-210ENST00000469897 BMP3P12645 472 aa15.8■□□□□ 0.12
CPSF4-210ENST00000469897 CTDSPL2Q05D32 466 aa15.8■□□□□ 0.12
CPSF4-210ENST00000469897 Q7L0L9 218 aa15.8■□□□□ 0.12
CPSF4-210ENST00000469897 TMEM232C9JQI7 657 aa15.79■□□□□ 0.12
CPSF4-210ENST00000469897 SNAI1O95863 264 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-210ENST00000469897 TRIM60Q495X7 471 aa15.79■□□□□ 0.12
CPSF4-210ENST00000469897 DEFB123Q8N688 67 aa15.79■□□□□ 0.12
CPSF4-210ENST00000469897 GMCL1P1Q8NEA9 526 aa15.79■□□□□ 0.12
CPSF4-210ENST00000469897 SLC38A10Q9HBR0 1119 aa15.79■□□□□ 0.12
CPSF4-210ENST00000469897 PRDM5Q9NQX1 630 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-210ENST00000469897 ISY1Q9ULR0 285 aaKnown RBP15.79■□□□□ 0.12
CPSF4-210ENST00000469897 CNPY2Q9Y2B0 182 aa15.79■□□□□ 0.12
CPSF4-210ENST00000469897 SALL3Q9BXA9 1300 aa15.78■□□□□ 0.12
CPSF4-210ENST00000469897 DNAJC25-GNG10A0A024R161 153 aa15.78■□□□□ 0.12
CPSF4-210ENST00000469897 FOXP2O15409 715 aa15.78■□□□□ 0.12
CPSF4-210ENST00000469897 MCCP23508 829 aa15.78■□□□□ 0.12
CPSF4-210ENST00000469897 VPS53Q5VIR6 699 aa15.78■□□□□ 0.12
CPSF4-210ENST00000469897 GPR153Q6NV75 609 aa15.78■□□□□ 0.12
CPSF4-210ENST00000469897 RNF180Q86T96 592 aa15.78■□□□□ 0.12
CPSF4-210ENST00000469897 ANKRD35Q8N283 1001 aa15.78■□□□□ 0.12
CPSF4-210ENST00000469897 LENG1Q96BZ8 264 aaPredicted RBP15.78■□□□□ 0.12
CPSF4-210ENST00000469897 FAM184BQ9ULE4 1060 aa15.78■□□□□ 0.12
CPSF4-210ENST00000469897 SYNPO2Q9UMS6 1093 aa15.78■□□□□ 0.12
CPSF4-210ENST00000469897 PHF24Q9UPV7 400 aa15.78■□□□□ 0.12
CPSF4-210ENST00000469897 NMT2O60551 498 aa15.77■□□□□ 0.12
CPSF4-210ENST00000469897 AKR1A1P14550 325 aa15.77■□□□□ 0.12
CPSF4-210ENST00000469897 PDE1AP54750 535 aa15.77■□□□□ 0.12
CPSF4-210ENST00000469897 TLE2Q04725 743 aa15.77■□□□□ 0.12
CPSF4-210ENST00000469897 SNX17Q15036 470 aa15.77■□□□□ 0.12
CPSF4-210ENST00000469897 SH3RF1Q7Z6J0 888 aa15.77■□□□□ 0.12
CPSF4-210ENST00000469897 BADQ92934 168 aa15.77■□□□□ 0.12
CPSF4-210ENST00000469897 EVI5LQ96CN4 794 aa15.77■□□□□ 0.12
CPSF4-210ENST00000469897 IL17RBQ9NRM6 502 aa15.77■□□□□ 0.12
CPSF4-210ENST00000469897 TACC3Q9Y6A5 838 aa15.77■□□□□ 0.12
CPSF4-210ENST00000469897 TRIM43BA6NCK2 446 aa15.76■□□□□ 0.11
CPSF4-210ENST00000469897 TSPY2A6NKD2 308 aa15.76■□□□□ 0.11
CPSF4-210ENST00000469897 SLC1A4P43007 532 aa15.76■□□□□ 0.11
CPSF4-210ENST00000469897 IKQ13123 557 aaPredicted RBP15.76■□□□□ 0.11
CPSF4-210ENST00000469897 C1orf53Q5VUE5 145 aa15.76■□□□□ 0.11
CPSF4-210ENST00000469897 MAMDC4Q6UXC1 1216 aa15.76■□□□□ 0.11
CPSF4-210ENST00000469897 MSL3Q8N5Y2 521 aaKnown RBP15.76■□□□□ 0.11
CPSF4-210ENST00000469897 SLC17A8Q8NDX2 589 aa15.76■□□□□ 0.11
CPSF4-210ENST00000469897 CHST13Q8NET6 341 aa15.76■□□□□ 0.11
CPSF4-210ENST00000469897 STAG1Q8WVM7 1258 aa15.76■□□□□ 0.11
CPSF4-210ENST00000469897 TRIM43Q96BQ3 446 aaPredicted RBP15.76■□□□□ 0.11
CPSF4-210ENST00000469897 AGBL1Q96MI9 1066 aa15.76■□□□□ 0.11
CPSF4-210ENST00000469897 HOMER2Q9NSB8 354 aa15.76■□□□□ 0.11
CPSF4-210ENST00000469897 ZHX1Q9UKY1 873 aaPredicted RBP15.76■□□□□ 0.11
CPSF4-210ENST00000469897 STX8Q9UNK0 236 aa15.76■□□□□ 0.11
CPSF4-210ENST00000469897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.76■□□□□ 0.11
CPSF4-210ENST00000469897 RLFQ13129 1914 aa15.75■□□□□ 0.11
CPSF4-210ENST00000469897 RANBP6O60518 1105 aaKnown RBP15.75■□□□□ 0.11
CPSF4-210ENST00000469897 ADAMTS4O75173 837 aa15.75■□□□□ 0.11
CPSF4-210ENST00000469897 OAZ1P54368 228 aa15.75■□□□□ 0.11
CPSF4-210ENST00000469897 SNAP25P60880 206 aa15.75■□□□□ 0.11
CPSF4-210ENST00000469897 IRX5P78411 483 aaPredicted RBP15.75■□□□□ 0.11
CPSF4-210ENST00000469897 HDAC1Q13547 482 aaPredicted RBP15.75■□□□□ 0.11
CPSF4-210ENST00000469897 ACVR2BQ13705 512 aa15.75■□□□□ 0.11
CPSF4-210ENST00000469897 SHHQ15465 462 aa15.75■□□□□ 0.11
CPSF4-210ENST00000469897 KCTD1Q719H9 257 aa15.75■□□□□ 0.11
CPSF4-210ENST00000469897 CHURC1Q8WUH1 139 aa15.75■□□□□ 0.11
CPSF4-210ENST00000469897 GMCL1Q96IK5 515 aa15.75■□□□□ 0.11
CPSF4-210ENST00000469897 FAM227BQ96M60 508 aa15.75■□□□□ 0.11
CPSF4-210ENST00000469897 HELLSQ9NRZ9 838 aa15.75■□□□□ 0.11
CPSF4-210ENST00000469897 MTMR10Q9NXD2 777 aa15.75■□□□□ 0.11
CPSF4-210ENST00000469897 FBXO40Q9UH90 709 aa15.75■□□□□ 0.11
CPSF4-210ENST00000469897 MTMR7Q9Y216 660 aa15.75■□□□□ 0.11
CPSF4-210ENST00000469897 SYNGAP1Q96PV0 1343 aa15.74■□□□□ 0.11
CPSF4-210ENST00000469897 FDX1P10109 184 aa15.74■□□□□ 0.11
CPSF4-210ENST00000469897 STAT2P52630 851 aa15.74■□□□□ 0.11
CPSF4-210ENST00000469897 ACLYP53396 1101 aa15.74■□□□□ 0.11
CPSF4-210ENST00000469897 CNTN2Q02246 1040 aa15.74■□□□□ 0.11
CPSF4-210ENST00000469897 KCNA10Q16322 511 aa15.74■□□□□ 0.11
CPSF4-210ENST00000469897 RCSD1Q6JBY9 416 aa15.74■□□□□ 0.11
CPSF4-210ENST00000469897 ZNF467Q7Z7K2 595 aaPredicted RBP15.74■□□□□ 0.11
CPSF4-210ENST00000469897 FAM160B2Q86V87 743 aa15.74■□□□□ 0.11
CPSF4-210ENST00000469897 YTHDC1Q96MU7 727 aaKnown RBP15.74■□□□□ 0.11
CPSF4-210ENST00000469897 PDLIM7Q9NR12 457 aa15.74■□□□□ 0.11
CPSF4-210ENST00000469897 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.74■□□□□ 0.11
CPSF4-210ENST00000469897 ANAPC4Q9UJX5 808 aa15.74■□□□□ 0.11
CPSF4-210ENST00000469897 ALPK3Q96L96 1907 aa15.74■□□□□ 0.11
CPSF4-210ENST00000469897 BAZ2AQ9UIF9 1905 aaKnown RBP15.74■□□□□ 0.11
CPSF4-210ENST00000469897 A0A0G2JMZ2 1700 aa15.74■□□□□ 0.11
CPSF4-210ENST00000469897 A0A1W2PQ45 241 aaPredicted RBP15.73■□□□□ 0.11
CPSF4-210ENST00000469897 A0A1W2PQY0 241 aa15.73■□□□□ 0.11
CPSF4-210ENST00000469897 POTEB2H3BUK9 544 aa15.73■□□□□ 0.11
CPSF4-210ENST00000469897 FGAP02671 866 aa15.73■□□□□ 0.11
CPSF4-210ENST00000469897 ITGB8P26012 769 aa15.73■□□□□ 0.11
CPSF4-210ENST00000469897 ALX1Q15699 326 aa15.73■□□□□ 0.11
CPSF4-210ENST00000469897 MCMDC2Q4G0Z9 681 aa15.73■□□□□ 0.11
CPSF4-210ENST00000469897 PPP4R3BQ5MIZ7 849 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 226.7 ms