RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 ERO1AQ96HE7 468 aa14.72□□□□□ -0.05
SPTLC1-204ENST00000469778 TBC1D32Q96NH3 1257 aa14.72□□□□□ -0.05
SPTLC1-204ENST00000469778 NUP88Q99567 741 aaPredicted RBP14.72□□□□□ -0.05
SPTLC1-204ENST00000469778 MAF1Q9H063 256 aa14.72□□□□□ -0.05
SPTLC1-204ENST00000469778 RBM28Q9NW13 759 aaKnown RBP14.72□□□□□ -0.05
SPTLC1-204ENST00000469778 RBPJLQ9UBG7 517 aa14.72□□□□□ -0.05
SPTLC1-204ENST00000469778 KLRF2D3W0D1 207 aa14.71□□□□□ -0.05
SPTLC1-204ENST00000469778 ZBTB43O43298 467 aa14.71□□□□□ -0.05
SPTLC1-204ENST00000469778 SLC25A27O95847 323 aa14.71□□□□□ -0.05
SPTLC1-204ENST00000469778 NEK4P51957 841 aa14.71□□□□□ -0.05
SPTLC1-204ENST00000469778 APOA5Q6Q788 366 aa14.71□□□□□ -0.05
SPTLC1-204ENST00000469778 KCTD1Q719H9 257 aa14.71□□□□□ -0.05
SPTLC1-204ENST00000469778 SHCBP1Q8NEM2 672 aa14.71□□□□□ -0.05
SPTLC1-204ENST00000469778 SLC38A10Q9HBR0 1119 aa14.71□□□□□ -0.05
SPTLC1-204ENST00000469778 ISY1Q9ULR0 285 aaKnown RBP14.71□□□□□ -0.05
SPTLC1-204ENST00000469778 HOXD10P28358 340 aa14.7□□□□□ -0.06
SPTLC1-204ENST00000469778 MAPK4P31152 587 aa14.7□□□□□ -0.06
SPTLC1-204ENST00000469778 ERVK-9P63128 1117 aa14.7□□□□□ -0.06
SPTLC1-204ENST00000469778 ERVK-24P63145 666 aa14.7□□□□□ -0.06
SPTLC1-204ENST00000469778 SYDE2Q5VT97 1194 aa14.7□□□□□ -0.06
SPTLC1-204ENST00000469778 CCAR1Q8IX12 1150 aaKnown RBP14.7□□□□□ -0.06
SPTLC1-204ENST00000469778 ANKRD13CQ8N6S4 541 aa14.7□□□□□ -0.06
SPTLC1-204ENST00000469778 NUP133Q8WUM0 1156 aa14.7□□□□□ -0.06
SPTLC1-204ENST00000469778 BRF1Q92994 677 aa14.7□□□□□ -0.06
SPTLC1-204ENST00000469778 KIFC2Q96AC6 838 aa14.7□□□□□ -0.06
SPTLC1-204ENST00000469778 TEX13BQ9BXU2 312 aa14.7□□□□□ -0.06
SPTLC1-204ENST00000469778 LRRC2Q9BYS8 371 aa14.7□□□□□ -0.06
SPTLC1-204ENST00000469778 UPF3BQ9BZI7 483 aaKnown RBP14.7□□□□□ -0.06
SPTLC1-204ENST00000469778 MROH8Q9H579 483 aa14.7□□□□□ -0.06
SPTLC1-204ENST00000469778 GPCPD1Q9NPB8 672 aa14.7□□□□□ -0.06
SPTLC1-204ENST00000469778 PRDM10Q9NQV6 1147 aa14.7□□□□□ -0.06
SPTLC1-204ENST00000469778 CPA4Q9UI42 421 aa14.7□□□□□ -0.06
SPTLC1-204ENST00000469778 MAD2L2Q9UI95 211 aa14.7□□□□□ -0.06
SPTLC1-204ENST00000469778 PRR12Q9ULL5 1215 aa14.7□□□□□ -0.06
SPTLC1-204ENST00000469778 KLF18A0A0U1RQI7 1052 aa14.69□□□□□ -0.06
SPTLC1-204ENST00000469778 FOXN1O15353 648 aa14.69□□□□□ -0.06
SPTLC1-204ENST00000469778 STRNO43815 780 aa14.69□□□□□ -0.06
SPTLC1-204ENST00000469778 DHX16O60231 1041 aaKnown RBP14.69□□□□□ -0.06
SPTLC1-204ENST00000469778 STAT3P40763 770 aa14.69□□□□□ -0.06
SPTLC1-204ENST00000469778 MCM2P49736 904 aa14.69□□□□□ -0.06
SPTLC1-204ENST00000469778 PRMT2P55345 433 aa14.69□□□□□ -0.06
SPTLC1-204ENST00000469778 TKFCQ3LXA3 575 aa14.69□□□□□ -0.06
SPTLC1-204ENST00000469778 ATG4CQ96DT6 458 aa14.69□□□□□ -0.06
SPTLC1-204ENST00000469778 TCEANC2Q96MN5 208 aa14.69□□□□□ -0.06
SPTLC1-204ENST00000469778 KIF2CQ99661 725 aa14.69□□□□□ -0.06
SPTLC1-204ENST00000469778 SPZ1Q9BXG8 430 aa14.69□□□□□ -0.06
SPTLC1-204ENST00000469778 RIOX1Q9H6W3 641 aa14.69□□□□□ -0.06
SPTLC1-204ENST00000469778 SENP2Q9HC62 589 aa14.69□□□□□ -0.06
SPTLC1-204ENST00000469778 GPHNQ9NQX3 736 aaPredicted RBP14.69□□□□□ -0.06
SPTLC1-204ENST00000469778 FBXO28Q9NVF7 368 aa14.69□□□□□ -0.06
SPTLC1-204ENST00000469778 MTMR7Q9Y216 660 aa14.69□□□□□ -0.06
SPTLC1-204ENST00000469778 ST18O60284 1047 aa14.68□□□□□ -0.06
SPTLC1-204ENST00000469778 HSPA8P11142 646 aaKnown RBP14.68□□□□□ -0.06
SPTLC1-204ENST00000469778 CPA1P15085 419 aa14.68□□□□□ -0.06
SPTLC1-204ENST00000469778 FCGRTP55899 365 aa14.68□□□□□ -0.06
SPTLC1-204ENST00000469778 LACTBP83111 547 aaPredicted RBP14.68□□□□□ -0.06
SPTLC1-204ENST00000469778 COL9A3Q14050 684 aaPredicted RBP14.68□□□□□ -0.06
SPTLC1-204ENST00000469778 RIOX2Q8IUF8 465 aa14.68□□□□□ -0.06
SPTLC1-204ENST00000469778 TEX2Q8IWB9 1127 aa14.68□□□□□ -0.06
SPTLC1-204ENST00000469778 ZNF296Q8WUU4 475 aaPredicted RBP14.68□□□□□ -0.06
SPTLC1-204ENST00000469778 SPATC1LQ9H0A9 340 aa14.68□□□□□ -0.06
SPTLC1-204ENST00000469778 RANBP17Q9H2T7 1088 aaKnown RBP14.68□□□□□ -0.06
SPTLC1-204ENST00000469778 R3HDMLQ9H3Y0 253 aa14.68□□□□□ -0.06
SPTLC1-204ENST00000469778 RBM27Q9P2N5 1060 aaKnown RBP14.68□□□□□ -0.06
SPTLC1-204ENST00000469778 FBXO40Q9UH90 709 aa14.68□□□□□ -0.06
SPTLC1-204ENST00000469778 ZNF214Q9UL59 606 aaPredicted RBP14.68□□□□□ -0.06
SPTLC1-204ENST00000469778 BRPF3Q9ULD4 1205 aa14.68□□□□□ -0.06
SPTLC1-204ENST00000469778 NID2Q14112 1375 aa14.68□□□□□ -0.06
SPTLC1-204ENST00000469778 FRMPD2Q68DX3 1309 aaPredicted RBP14.67□□□□□ -0.06
SPTLC1-204ENST00000469778 GOLGA8HP0CJ92 632 aa14.67□□□□□ -0.06
SPTLC1-204ENST00000469778 PDIA3P30101 505 aaKnown RBP14.67□□□□□ -0.06
SPTLC1-204ENST00000469778 TOB2Q14106 344 aaPredicted RBP14.67□□□□□ -0.06
SPTLC1-204ENST00000469778 TMEM132BQ14DG7 1078 aa14.67□□□□□ -0.06
SPTLC1-204ENST00000469778 RTN1Q16799 776 aa14.67□□□□□ -0.06
SPTLC1-204ENST00000469778 TTBK2Q6IQ55 1244 aa14.67□□□□□ -0.06
SPTLC1-204ENST00000469778 CPLX2Q6PUV4 134 aaKnown RBP14.67□□□□□ -0.06
SPTLC1-204ENST00000469778 ADGRF4Q8IZF3 695 aa14.67□□□□□ -0.06
SPTLC1-204ENST00000469778 ABRAQ8N0Z2 381 aa14.67□□□□□ -0.06
SPTLC1-204ENST00000469778 REPS2Q8NFH8 660 aa14.67□□□□□ -0.06
SPTLC1-204ENST00000469778 MTMR8Q96EF0 704 aa14.67□□□□□ -0.06
SPTLC1-204ENST00000469778 ZSCAN31Q96LW9 406 aaPredicted RBP14.67□□□□□ -0.06
SPTLC1-204ENST00000469778 PAGR1Q9BTK6 254 aa14.67□□□□□ -0.06
SPTLC1-204ENST00000469778 TXNRD2Q9NNW7 524 aa14.67□□□□□ -0.06
SPTLC1-204ENST00000469778 BTBD7Q9P203 1132 aa14.67□□□□□ -0.06
SPTLC1-204ENST00000469778 LIMCH1Q9UPQ0 1083 aa14.67□□□□□ -0.06
SPTLC1-204ENST00000469778 GOLGA8BA8MQT2 603 aa14.66□□□□□ -0.06
SPTLC1-204ENST00000469778 CNMDO75829 334 aa14.66□□□□□ -0.06
SPTLC1-204ENST00000469778 ICAM1P05362 532 aa14.66□□□□□ -0.06
SPTLC1-204ENST00000469778 SLC16A2P36021 539 aa14.66□□□□□ -0.06
SPTLC1-204ENST00000469778 METAP2P50579 478 aaKnown RBP eCLIP14.66□□□□□ -0.06
SPTLC1-204ENST00000469778 APOBRQ0VD83 1088 aa14.66□□□□□ -0.06
SPTLC1-204ENST00000469778 PKN2Q16513 984 aaKnown RBP14.66□□□□□ -0.06
SPTLC1-204ENST00000469778 Q3C1V9 767 aa14.66□□□□□ -0.06
SPTLC1-204ENST00000469778 POTEEQ6S8J3 1075 aa14.66□□□□□ -0.06
SPTLC1-204ENST00000469778 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.66□□□□□ -0.06
SPTLC1-204ENST00000469778 MICU3Q86XE3 530 aa14.66□□□□□ -0.06
SPTLC1-204ENST00000469778 STAG2Q8N3U4 1231 aa14.66□□□□□ -0.06
SPTLC1-204ENST00000469778 SAMD3Q8N6K7 520 aa14.66□□□□□ -0.06
SPTLC1-204ENST00000469778 CHST13Q8NET6 341 aa14.66□□□□□ -0.06
SPTLC1-204ENST00000469778 COA7Q96BR5 231 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms