RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 NBPF12Q5TAG4 269 aaPredicted RBP8.19□□□□□ -1.1
UBE3C-204ENST00000469336 C6orf15Q6UXA7 325 aaPredicted RBP8.19□□□□□ -1.1
UBE3C-204ENST00000469336 PPFIBP1Q86W92 1011 aa8.19□□□□□ -1.1
UBE3C-204ENST00000469336 CREG2Q8IUH2 290 aa8.19□□□□□ -1.1
UBE3C-204ENST00000469336 MICAL1Q8TDZ2 1067 aa8.19□□□□□ -1.1
UBE3C-204ENST00000469336 KLHL6Q8WZ60 621 aa8.19□□□□□ -1.1
UBE3C-204ENST00000469336 VWCEQ96DN2 955 aa8.19□□□□□ -1.1
UBE3C-204ENST00000469336 ZSWIM4Q9H7M6 989 aa8.19□□□□□ -1.1
UBE3C-204ENST00000469336 B2RBV5 119 aa8.18□□□□□ -1.1
UBE3C-204ENST00000469336 GJB6O95452 261 aa8.18□□□□□ -1.1
UBE3C-204ENST00000469336 TPP2P29144 1249 aaPredicted RBP8.18□□□□□ -1.1
UBE3C-204ENST00000469336 HK2P52789 917 aa8.18□□□□□ -1.1
UBE3C-204ENST00000469336 RASA3Q14644 834 aa8.18□□□□□ -1.1
UBE3C-204ENST00000469336 GNPTABQ3T906 1256 aa8.18□□□□□ -1.1
UBE3C-204ENST00000469336 MPZL3Q6UWV2 235 aa8.18□□□□□ -1.1
UBE3C-204ENST00000469336 CCDC113Q9H0I3 377 aa8.18□□□□□ -1.1
UBE3C-204ENST00000469336 ADAMTS10Q9H324 1103 aa8.18□□□□□ -1.1
UBE3C-204ENST00000469336 PCDHB10Q9UN67 800 aa8.18□□□□□ -1.1
UBE3C-204ENST00000469336 DDAH1O94760 285 aa8.17□□□□□ -1.1
UBE3C-204ENST00000469336 ZEB1P37275 1124 aaPredicted RBP8.17□□□□□ -1.1
UBE3C-204ENST00000469336 TMEM67Q5HYA8 995 aa8.17□□□□□ -1.1
UBE3C-204ENST00000469336 PIWIL2Q8TC59 973 aaKnown RBP8.17□□□□□ -1.1
UBE3C-204ENST00000469336 FAM84AQ96KN4 292 aa8.17□□□□□ -1.1
UBE3C-204ENST00000469336 DIRC2Q96SL1 478 aa8.17□□□□□ -1.1
UBE3C-204ENST00000469336 SLC38A3Q99624 504 aa8.17□□□□□ -1.1
UBE3C-204ENST00000469336 ST7Q9NRC1 585 aa8.17□□□□□ -1.1
UBE3C-204ENST00000469336 SNTG2Q9NY99 539 aa8.17□□□□□ -1.1
UBE3C-204ENST00000469336 DBX1A6NMT0 343 aa8.16□□□□□ -1.1
UBE3C-204ENST00000469336 TRHRP34981 398 aaPredicted RBP8.16□□□□□ -1.1
UBE3C-204ENST00000469336 RASGRF1Q13972 1273 aa8.16□□□□□ -1.1
UBE3C-204ENST00000469336 BMS1Q14692 1282 aaKnown RBP8.16□□□□□ -1.1
UBE3C-204ENST00000469336 PKN1Q16512 942 aa8.16□□□□□ -1.1
UBE3C-204ENST00000469336 TDRD10Q5VZ19 366 aaKnown RBP8.16□□□□□ -1.1
UBE3C-204ENST00000469336 KIAA1211LQ6NV74 962 aa8.16□□□□□ -1.1
UBE3C-204ENST00000469336 NOP9Q86U38 636 aaKnown RBP8.16□□□□□ -1.1
UBE3C-204ENST00000469336 DTWD2Q8NBA8 298 aa8.16□□□□□ -1.1
UBE3C-204ENST00000469336 DEPDC7Q96QD5 511 aa8.16□□□□□ -1.1
UBE3C-204ENST00000469336 MKRN2Q9H000 416 aaKnown RBP8.16□□□□□ -1.1
UBE3C-204ENST00000469336 FAM53CQ9NYF3 392 aa8.16□□□□□ -1.1
UBE3C-204ENST00000469336 CDK11AQ9UQ88 783 aaPredicted RBP8.16□□□□□ -1.1
UBE3C-204ENST00000469336 C9IYK1 514 aa8.15□□□□□ -1.1
UBE3C-204ENST00000469336 ZNF143P52747 638 aaPredicted RBP8.15□□□□□ -1.1
UBE3C-204ENST00000469336 GAB4Q2WGN9 574 aa8.15□□□□□ -1.1
UBE3C-204ENST00000469336 MRM1Q6IN84 353 aaKnown RBP8.15□□□□□ -1.1
UBE3C-204ENST00000469336 TMPRSS7Q7RTY8 843 aa8.15□□□□□ -1.1
UBE3C-204ENST00000469336 ZNF512BQ96KM6 892 aaPredicted RBP8.15□□□□□ -1.1
UBE3C-204ENST00000469336 SRPK1Q96SB4 655 aaKnown RBP8.15□□□□□ -1.1
UBE3C-204ENST00000469336 PIF1Q9H611 641 aa8.15□□□□□ -1.1
UBE3C-204ENST00000469336 TMEM59LQ9UK28 342 aa8.15□□□□□ -1.1
UBE3C-204ENST00000469336 PDPK1O15530 556 aa8.14□□□□□ -1.11
UBE3C-204ENST00000469336 NAT2P11245 290 aa8.14□□□□□ -1.11
UBE3C-204ENST00000469336 SRFP11831 508 aa8.14□□□□□ -1.11
UBE3C-204ENST00000469336 ANKRD39Q53RE8 183 aa8.14□□□□□ -1.11
UBE3C-204ENST00000469336 AXDND1Q5T1B0 1012 aaPredicted RBP8.14□□□□□ -1.11
UBE3C-204ENST00000469336 EEPD1Q7L9B9 569 aa8.14□□□□□ -1.11
UBE3C-204ENST00000469336 CCDC144CPQ8IYA2 1237 aa8.14□□□□□ -1.11
UBE3C-204ENST00000469336 ST13P5Q8NFI4 369 aaPredicted RBP8.14□□□□□ -1.11
UBE3C-204ENST00000469336 ABHD4Q8TB40 342 aa8.14□□□□□ -1.11
UBE3C-204ENST00000469336 ZNF669Q96BR6 464 aaPredicted RBP8.14□□□□□ -1.11
UBE3C-204ENST00000469336 MRFAP1L1Q96HT8 127 aa8.14□□□□□ -1.11
UBE3C-204ENST00000469336 HAUS7Q99871 368 aa8.14□□□□□ -1.11
UBE3C-204ENST00000469336 EPN3Q9H201 632 aa8.14□□□□□ -1.11
UBE3C-204ENST00000469336 DUSP13Q9UII6 198 aa8.14□□□□□ -1.11
UBE3C-204ENST00000469336 ARID1BQ8NFD5 2236 aaPredicted RBP8.13□□□□□ -1.11
UBE3C-204ENST00000469336 SHISA3A0PJX4 238 aa8.13□□□□□ -1.11
UBE3C-204ENST00000469336 SUSD5O60279 629 aa8.13□□□□□ -1.11
UBE3C-204ENST00000469336 TP53P04637 393 aaPredicted RBP8.13□□□□□ -1.11
UBE3C-204ENST00000469336 EGR3Q06889 387 aa8.13□□□□□ -1.11
UBE3C-204ENST00000469336 AUHQ13825 339 aaKnown RBP8.13□□□□□ -1.11
UBE3C-204ENST00000469336 NBPF9Q3BBW0 867 aa8.13□□□□□ -1.11
UBE3C-204ENST00000469336 SYDE1Q6ZW31 735 aaPredicted RBP8.13□□□□□ -1.11
UBE3C-204ENST00000469336 C7orf61Q8IZ16 206 aa8.13□□□□□ -1.11
UBE3C-204ENST00000469336 GPR62Q9BZJ7 368 aa8.13□□□□□ -1.11
UBE3C-204ENST00000469336 KLHL25Q9H0H3 589 aa8.13□□□□□ -1.11
UBE3C-204ENST00000469336 NSUN3Q9H649 340 aaKnown RBP8.13□□□□□ -1.11
UBE3C-204ENST00000469336 C19orf44Q9H6X5 657 aa8.13□□□□□ -1.11
UBE3C-204ENST00000469336 PRR13Q9NZ81 148 aa8.13□□□□□ -1.11
UBE3C-204ENST00000469336 KCNH3Q9ULD8 1083 aa8.13□□□□□ -1.11
UBE3C-204ENST00000469336 ANKRD34BA5PLL1 514 aa8.12□□□□□ -1.11
UBE3C-204ENST00000469336 FAM221BA6H8Z2 402 aa8.12□□□□□ -1.11
UBE3C-204ENST00000469336 SHOXO15266 292 aa8.12□□□□□ -1.11
UBE3C-204ENST00000469336 CBFA2T2O43439 604 aa8.12□□□□□ -1.11
UBE3C-204ENST00000469336 DCAF15Q66K64 600 aa8.12□□□□□ -1.11
UBE3C-204ENST00000469336 HEATR6Q6AI08 1181 aaKnown RBP8.12□□□□□ -1.11
UBE3C-204ENST00000469336 TSPYL5Q86VY4 417 aaPredicted RBP8.12□□□□□ -1.11
UBE3C-204ENST00000469336 MYLIPQ8WY64 445 aa8.12□□□□□ -1.11
UBE3C-204ENST00000469336 TRIT1Q9H3H1 467 aaKnown RBP8.12□□□□□ -1.11
UBE3C-204ENST00000469336 GPATCH2Q9NW75 528 aa8.12□□□□□ -1.11
UBE3C-204ENST00000469336 SUSD2Q9UGT4 822 aa8.12□□□□□ -1.11
UBE3C-204ENST00000469336 PCDHA11Q9Y5I1 949 aa8.12□□□□□ -1.11
UBE3C-204ENST00000469336 EPHX1P07099 455 aa8.11□□□□□ -1.11
UBE3C-204ENST00000469336 CILP2Q8IUL8 1156 aa8.11□□□□□ -1.11
UBE3C-204ENST00000469336 FAM86C1Q9NVL1 165 aa8.11□□□□□ -1.11
UBE3C-204ENST00000469336 PCDHB12Q9Y5F1 795 aa8.11□□□□□ -1.11
UBE3C-204ENST00000469336 MYO15BQ96JP2 1530 aa8.11□□□□□ -1.11
UBE3C-204ENST00000469336 CCDC85CA6NKD9 419 aa8.1□□□□□ -1.11
UBE3C-204ENST00000469336 HPXP02790 462 aa8.1□□□□□ -1.11
UBE3C-204ENST00000469336 KRT1P04264 644 aa8.1□□□□□ -1.11
UBE3C-204ENST00000469336 RAC2P15153 192 aa8.1□□□□□ -1.11
UBE3C-204ENST00000469336 IFRD2Q12894 506 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms