RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 VTI1BQ9UEU0 232 aa6.75□□□□□ -1.33
SCFD1-205ENST00000469043 MBD1Q9UIS9 605 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-205ENST00000469043 SMARCA5O60264 1052 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-205ENST00000469043 FOXD2O60548 495 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-205ENST00000469043 PI3P19957 117 aa6.74□□□□□ -1.33
SCFD1-205ENST00000469043 NBPF9Q3BBW0 867 aa6.74□□□□□ -1.33
SCFD1-205ENST00000469043 SREK1Q8WXA9 508 aaKnown RBP6.74□□□□□ -1.33
SCFD1-205ENST00000469043 BCL2L13Q9BXK5 485 aa6.74□□□□□ -1.33
SCFD1-205ENST00000469043 N4BP3O15049 544 aa6.73□□□□□ -1.33
SCFD1-205ENST00000469043 UBOX5O94941 541 aa6.73□□□□□ -1.33
SCFD1-205ENST00000469043 SYPP08247 313 aa6.73□□□□□ -1.33
SCFD1-205ENST00000469043 RTP1P59025 263 aa6.73□□□□□ -1.33
SCFD1-205ENST00000469043 NFIXQ14938 502 aa6.73□□□□□ -1.33
SCFD1-205ENST00000469043 NBPF12Q5TAG4 269 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-205ENST00000469043 SPATA32Q96LK8 384 aa6.73□□□□□ -1.33
SCFD1-205ENST00000469043 KRTAP4-5Q9BYR2 181 aa6.73□□□□□ -1.33
SCFD1-205ENST00000469043 TLR3O15455 904 aaKnown RBP6.72□□□□□ -1.33
SCFD1-205ENST00000469043 FKTNO75072 461 aa6.72□□□□□ -1.33
SCFD1-205ENST00000469043 MPOP05164 745 aa6.72□□□□□ -1.33
SCFD1-205ENST00000469043 SYN1P17600 705 aa6.72□□□□□ -1.33
SCFD1-205ENST00000469043 ENDOUP21128 410 aaKnown RBP6.72□□□□□ -1.33
SCFD1-205ENST00000469043 VIPR1P32241 457 aa6.72□□□□□ -1.33
SCFD1-205ENST00000469043 ARL4AP40617 200 aa6.72□□□□□ -1.33
SCFD1-205ENST00000469043 AFF3P51826 1226 aaKnown RBP6.72□□□□□ -1.33
SCFD1-205ENST00000469043 GALNT18Q6P9A2 607 aa6.72□□□□□ -1.33
SCFD1-205ENST00000469043 TMC3Q7Z5M5 1100 aa6.72□□□□□ -1.33
SCFD1-205ENST00000469043 FBXO27Q8NI29 283 aa6.72□□□□□ -1.33
SCFD1-205ENST00000469043 HHIPL1Q96JK4 782 aa6.72□□□□□ -1.33
SCFD1-205ENST00000469043 C8orf37Q96NL8 207 aa6.72□□□□□ -1.33
SCFD1-205ENST00000469043 GMIPQ9P107 970 aa6.72□□□□□ -1.33
SCFD1-205ENST00000469043 TNFRSF10DQ9UBN6 386 aa6.72□□□□□ -1.33
SCFD1-205ENST00000469043 PCDHB14Q9Y5E9 798 aa6.72□□□□□ -1.33
SCFD1-205ENST00000469043 A0A0G2JLL6 359 aaPredicted RBP6.71□□□□□ -1.34
SCFD1-205ENST00000469043 TMEM82A0PJX8 343 aa6.71□□□□□ -1.34
SCFD1-205ENST00000469043 WTIPA6NIX2 430 aaPredicted RBP6.71□□□□□ -1.34
SCFD1-205ENST00000469043 TRIM13O60858 407 aa6.71□□□□□ -1.34
SCFD1-205ENST00000469043 ATE1O95260 518 aa6.71□□□□□ -1.34
SCFD1-205ENST00000469043 GARTP22102 1010 aa6.71□□□□□ -1.34
SCFD1-205ENST00000469043 YBX1P67809 324 aaKnown RBP6.71□□□□□ -1.34
SCFD1-205ENST00000469043 TMEM62Q0P6H9 643 aa6.71□□□□□ -1.34
SCFD1-205ENST00000469043 ERICH6BQ5W0A0 696 aa6.71□□□□□ -1.34
SCFD1-205ENST00000469043 PANK1Q8TE04 598 aa6.71□□□□□ -1.34
SCFD1-205ENST00000469043 GIPC2Q8TF65 315 aa6.71□□□□□ -1.34
SCFD1-205ENST00000469043 DACT3Q96B18 629 aaPredicted RBP6.71□□□□□ -1.34
SCFD1-205ENST00000469043 CNTD2Q9H8S5 307 aa6.71□□□□□ -1.34
SCFD1-205ENST00000469043 BRMS1Q9HCU9 246 aa6.71□□□□□ -1.34
SCFD1-205ENST00000469043 SUPT16HQ9Y5B9 1047 aaKnown RBP6.71□□□□□ -1.34
SCFD1-205ENST00000469043 EFEMP2O95967 443 aa6.7□□□□□ -1.34
SCFD1-205ENST00000469043 CCNFP41002 786 aa6.7□□□□□ -1.34
SCFD1-205ENST00000469043 LAPTM5Q13571 262 aa6.7□□□□□ -1.34
SCFD1-205ENST00000469043 CDCP2Q5VXM1 449 aa6.7□□□□□ -1.34
SCFD1-205ENST00000469043 FBXL19Q6PCT2 694 aa6.7□□□□□ -1.34
SCFD1-205ENST00000469043 KRTAP9-3Q9BYQ3 159 aa6.7□□□□□ -1.34
SCFD1-205ENST00000469043 KBTBD4Q9NVX7 518 aa6.7□□□□□ -1.34
SCFD1-205ENST00000469043 TAF6LQ9Y6J9 622 aa6.7□□□□□ -1.34
SCFD1-205ENST00000469043 SIGLEC6O43699 453 aa6.69□□□□□ -1.34
SCFD1-205ENST00000469043 CLEC3AO75596 197 aa6.69□□□□□ -1.34
SCFD1-205ENST00000469043 PRAMEF1O95521 474 aa6.69□□□□□ -1.34
SCFD1-205ENST00000469043 SDHBP21912 280 aa6.69□□□□□ -1.34
SCFD1-205ENST00000469043 EIF4A3P38919 411 aaKnown RBP6.69□□□□□ -1.34
SCFD1-205ENST00000469043 EPHB3P54753 998 aa6.69□□□□□ -1.34
SCFD1-205ENST00000469043 ERVFRD-1P60508 538 aa6.69□□□□□ -1.34
SCFD1-205ENST00000469043 BBS9Q3SYG4 887 aa6.69□□□□□ -1.34
SCFD1-205ENST00000469043 ZPBP2Q6X784 338 aa6.69□□□□□ -1.34
SCFD1-205ENST00000469043 FBXO33Q7Z6M2 555 aa6.69□□□□□ -1.34
SCFD1-205ENST00000469043 MZB1Q8WU39 189 aa6.69□□□□□ -1.34
SCFD1-205ENST00000469043 FCRL2Q96LA5 508 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-205ENST00000469043 LRRC3Q9BY71 257 aa6.69□□□□□ -1.34
SCFD1-205ENST00000469043 PRDM14Q9GZV8 571 aa6.69□□□□□ -1.34
SCFD1-205ENST00000469043 CHST7Q9NS84 486 aa6.69□□□□□ -1.34
SCFD1-205ENST00000469043 RTEL1Q9NZ71 1219 aa6.69□□□□□ -1.34
SCFD1-205ENST00000469043 FADS2P1A8MWK0 482 aa6.68□□□□□ -1.34
SCFD1-205ENST00000469043 SNW1Q13573 536 aaKnown RBP6.68□□□□□ -1.34
SCFD1-205ENST00000469043 CNKSR3Q6P9H4 555 aa6.68□□□□□ -1.34
SCFD1-205ENST00000469043 CXorf38Q8TB03 319 aa6.68□□□□□ -1.34
SCFD1-205ENST00000469043 PLCD4Q9BRC7 762 aa6.68□□□□□ -1.34
SCFD1-205ENST00000469043 XYLT2Q9H1B5 865 aa6.68□□□□□ -1.34
SCFD1-205ENST00000469043 CNNM2Q9H8M5 875 aa6.68□□□□□ -1.34
SCFD1-205ENST00000469043 PPP1R1BQ9UD71 204 aaPredicted RBP6.68□□□□□ -1.34
SCFD1-205ENST00000469043 GREM1O60565 184 aa6.67□□□□□ -1.34
SCFD1-205ENST00000469043 NCLP19338 710 aaKnown RBP6.67□□□□□ -1.34
SCFD1-205ENST00000469043 POLR2BP30876 1174 aaKnown RBP6.67□□□□□ -1.34
SCFD1-205ENST00000469043 CDR1P51861 262 aa6.67□□□□□ -1.34
SCFD1-205ENST00000469043 ZC3H6P61129 1189 aaKnown RBP6.67□□□□□ -1.34
SCFD1-205ENST00000469043 CYP4F8P98187 520 aa6.67□□□□□ -1.34
SCFD1-205ENST00000469043 LRRFIP1Q32MZ4 808 aaKnown RBP6.67□□□□□ -1.34
SCFD1-205ENST00000469043 HSF5Q4G112 596 aaPredicted RBP6.67□□□□□ -1.34
SCFD1-205ENST00000469043 OVOS1Q6IE37 1185 aa6.67□□□□□ -1.34
SCFD1-205ENST00000469043 ERMP1Q7Z2K6 904 aa6.67□□□□□ -1.34
SCFD1-205ENST00000469043 ATG4CQ96DT6 458 aa6.67□□□□□ -1.34
SCFD1-205ENST00000469043 EHMT1Q9H9B1 1298 aa6.67□□□□□ -1.34
SCFD1-205ENST00000469043 KCNQ5Q9NR82 932 aa6.67□□□□□ -1.34
SCFD1-205ENST00000469043 KLHL14Q9P2G3 628 aa6.67□□□□□ -1.34
SCFD1-205ENST00000469043 FBXL21Q9UKT6 434 aa6.67□□□□□ -1.34
SCFD1-205ENST00000469043 A0A1W2PQ45 241 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-205ENST00000469043 A0A1W2PQY0 241 aa6.66□□□□□ -1.34
SCFD1-205ENST00000469043 OTOL1A6NHN0 477 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-205ENST00000469043 IRS4O14654 1257 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-205ENST00000469043 PRKCAP17252 672 aa6.66□□□□□ -1.34
SCFD1-205ENST00000469043 RAB3GAP1Q15042 981 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms