RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 TSEN34Q9BSV6 310 aaKnown RBP14.19□□□□□ -0.14
CNOT4-208ENST00000465721 TMEM39AQ9NV64 488 aa14.19□□□□□ -0.14
CNOT4-208ENST00000465721 TBX21Q9UL17 535 aa14.19□□□□□ -0.14
CNOT4-208ENST00000465721 SYNGAP1Q96PV0 1343 aa14.18□□□□□ -0.14
CNOT4-208ENST00000465721 USP17L12C9JPN9 530 aa14.18□□□□□ -0.14
CNOT4-208ENST00000465721 USP17L21D6R901 530 aa14.18□□□□□ -0.14
CNOT4-208ENST00000465721 COPB2P35606 906 aa14.18□□□□□ -0.14
CNOT4-208ENST00000465721 ACLYP53396 1101 aa14.18□□□□□ -0.14
CNOT4-208ENST00000465721 FAM83BQ5T0W9 1011 aa14.18□□□□□ -0.14
CNOT4-208ENST00000465721 CCSAPQ6IQ19 270 aaPredicted RBP14.18□□□□□ -0.14
CNOT4-208ENST00000465721 KLHDC9Q8NEP7 349 aa14.18□□□□□ -0.14
CNOT4-208ENST00000465721 KIF1BPQ96EK5 621 aa14.18□□□□□ -0.14
CNOT4-208ENST00000465721 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.18□□□□□ -0.14
CNOT4-208ENST00000465721 KANSL2Q9H9L4 492 aa14.18□□□□□ -0.14
CNOT4-208ENST00000465721 STARD7Q9NQZ5 370 aa14.18□□□□□ -0.14
CNOT4-208ENST00000465721 PAG1Q9NWQ8 432 aa14.18□□□□□ -0.14
CNOT4-208ENST00000465721 CNPY2Q9Y2B0 182 aa14.18□□□□□ -0.14
CNOT4-208ENST00000465721 TCF20Q9UGU0 1960 aaKnown RBP14.17□□□□□ -0.14
CNOT4-208ENST00000465721 MYADML2A6NDP7 307 aa14.17□□□□□ -0.14
CNOT4-208ENST00000465721 MOXD2PA6NHM9 499 aa14.17□□□□□ -0.14
CNOT4-208ENST00000465721 APBB1O00213 710 aa14.17□□□□□ -0.14
CNOT4-208ENST00000465721 MSL3Q8N5Y2 521 aaKnown RBP14.17□□□□□ -0.14
CNOT4-208ENST00000465721 PANK1Q8TE04 598 aa14.17□□□□□ -0.14
CNOT4-208ENST00000465721 SYMPKQ92797 1274 aaKnown RBP14.17□□□□□ -0.14
CNOT4-208ENST00000465721 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.17□□□□□ -0.14
CNOT4-208ENST00000465721 TEX13BQ9BXU2 312 aa14.17□□□□□ -0.14
CNOT4-208ENST00000465721 GOPCQ9HD26 462 aa14.17□□□□□ -0.14
CNOT4-208ENST00000465721 DNAJC25-GNG10A0A024R161 153 aa14.16□□□□□ -0.14
CNOT4-208ENST00000465721 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.16□□□□□ -0.14
CNOT4-208ENST00000465721 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.16□□□□□ -0.14
CNOT4-208ENST00000465721 ADCY6O43306 1168 aa14.16□□□□□ -0.14
CNOT4-208ENST00000465721 SNAI1O95863 264 aaPredicted RBP14.16□□□□□ -0.14
CNOT4-208ENST00000465721 TIMP1P01033 207 aa14.16□□□□□ -0.14
CNOT4-208ENST00000465721 IFIT2P09913 472 aaKnown RBP14.16□□□□□ -0.14
CNOT4-208ENST00000465721 CST5P28325 142 aaPredicted RBP14.16□□□□□ -0.14
CNOT4-208ENST00000465721 IRX5P78411 483 aaPredicted RBP14.16□□□□□ -0.14
CNOT4-208ENST00000465721 SNRNP48Q6IEG0 339 aaKnown RBP14.16□□□□□ -0.14
CNOT4-208ENST00000465721 MAMDC4Q6UXC1 1216 aa14.16□□□□□ -0.14
CNOT4-208ENST00000465721 FGD4Q96M96 766 aa14.16□□□□□ -0.14
CNOT4-208ENST00000465721 NUP88Q99567 741 aaPredicted RBP14.16□□□□□ -0.14
CNOT4-208ENST00000465721 BOLA2Q9H3K6 86 aa14.16□□□□□ -0.14
CNOT4-208ENST00000465721 ZNF576Q9H609 170 aa14.16□□□□□ -0.14
CNOT4-208ENST00000465721 DCDC2CA8MYV0 355 aa14.15□□□□□ -0.14
CNOT4-208ENST00000465721 DUSP11O75319 330 aaKnown RBP14.15□□□□□ -0.14
CNOT4-208ENST00000465721 UBE3CQ15386 1083 aa14.15□□□□□ -0.14
CNOT4-208ENST00000465721 KCNA10Q16322 511 aa14.15□□□□□ -0.14
CNOT4-208ENST00000465721 TJAP1Q5JTD0 557 aa14.15□□□□□ -0.14
CNOT4-208ENST00000465721 RASIP1Q5U651 963 aa14.15□□□□□ -0.14
CNOT4-208ENST00000465721 MFSD5Q6N075 450 aa14.15□□□□□ -0.14
CNOT4-208ENST00000465721 CTR9Q6PD62 1173 aa14.15□□□□□ -0.14
CNOT4-208ENST00000465721 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.15□□□□□ -0.14
CNOT4-208ENST00000465721 C16orf59Q7L2K0 433 aa14.15□□□□□ -0.14
CNOT4-208ENST00000465721 SIRT2Q8IXJ6 389 aa14.15□□□□□ -0.14
CNOT4-208ENST00000465721 AMOTL1Q8IY63 956 aa14.15□□□□□ -0.14
CNOT4-208ENST00000465721 NUP133Q8WUM0 1156 aa14.15□□□□□ -0.14
CNOT4-208ENST00000465721 TIFAQ96CG3 184 aa14.15□□□□□ -0.14
CNOT4-208ENST00000465721 HAUS7Q99871 368 aa14.15□□□□□ -0.14
CNOT4-208ENST00000465721 SLF1Q9BQI6 1058 aa14.15□□□□□ -0.14
CNOT4-208ENST00000465721 ZHX1Q9UKY1 873 aaPredicted RBP14.15□□□□□ -0.14
CNOT4-208ENST00000465721 FAM184BQ9ULE4 1060 aa14.15□□□□□ -0.14
CNOT4-208ENST00000465721 RIPK3Q9Y572 518 aa14.15□□□□□ -0.14
CNOT4-208ENST00000465721 SCN5AQ14524 2016 aa14.15□□□□□ -0.14
CNOT4-208ENST00000465721 BRWD1Q9NSI6 2320 aa14.14□□□□□ -0.15
CNOT4-208ENST00000465721 RAD21O60216 631 aa14.14□□□□□ -0.15
CNOT4-208ENST00000465721 ATP5JP18859 108 aa14.14□□□□□ -0.15
CNOT4-208ENST00000465721 CDK7P50613 346 aa14.14□□□□□ -0.15
CNOT4-208ENST00000465721 TMEM240Q5SV17 173 aa14.14□□□□□ -0.15
CNOT4-208ENST00000465721 ZNF467Q7Z7K2 595 aaPredicted RBP14.14□□□□□ -0.15
CNOT4-208ENST00000465721 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.14□□□□□ -0.15
CNOT4-208ENST00000465721 UPF3AQ9H1J1 476 aaKnown RBP14.14□□□□□ -0.15
CNOT4-208ENST00000465721 ARPP21Q9UBL0 812 aaPredicted RBP14.14□□□□□ -0.15
CNOT4-208ENST00000465721 SLC4A4Q9Y6R1 1079 aa14.14□□□□□ -0.15
CNOT4-208ENST00000465721 PRRC2BQ5JSZ5 2229 aaKnown RBP14.14□□□□□ -0.15
CNOT4-208ENST00000465721 ELP1O95163 1332 aa14.14□□□□□ -0.15
CNOT4-208ENST00000465721 MROH7Q68CQ1 1323 aa14.14□□□□□ -0.15
CNOT4-208ENST00000465721 TANC1Q9C0D5 1861 aa14.13□□□□□ -0.15
CNOT4-208ENST00000465721 ATP2A1O14983 1001 aa14.13□□□□□ -0.15
CNOT4-208ENST00000465721 NDUFB10O96000 172 aa14.13□□□□□ -0.15
CNOT4-208ENST00000465721 RASA1P20936 1047 aa14.13□□□□□ -0.15
CNOT4-208ENST00000465721 PBX2P40425 430 aa14.13□□□□□ -0.15
CNOT4-208ENST00000465721 PPIGQ13427 754 aaKnown RBP eCLIP14.13□□□□□ -0.15
CNOT4-208ENST00000465721 DDRGK1Q96HY6 314 aa14.13□□□□□ -0.15
CNOT4-208ENST00000465721 GLT1D1Q96MS3 346 aa14.13□□□□□ -0.15
CNOT4-208ENST00000465721 PBX4Q9BYU1 374 aa14.13□□□□□ -0.15
CNOT4-208ENST00000465721 PUS7LQ9H0K6 701 aaKnown RBP14.13□□□□□ -0.15
CNOT4-208ENST00000465721 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.13□□□□□ -0.15
CNOT4-208ENST00000465721 GRXCR1A8MXD5 290 aa14.12□□□□□ -0.15
CNOT4-208ENST00000465721 TNFRSF10AO00220 468 aa14.12□□□□□ -0.15
CNOT4-208ENST00000465721 CTAGE5O15320 804 aa14.12□□□□□ -0.15
CNOT4-208ENST00000465721 RAB11FIP3O75154 756 aa14.12□□□□□ -0.15
CNOT4-208ENST00000465721 ASGR1P07306 291 aa14.12□□□□□ -0.15
CNOT4-208ENST00000465721 C6orf222P0C671 652 aaPredicted RBP14.12□□□□□ -0.15
CNOT4-208ENST00000465721 CSF2RAP15509 400 aa14.12□□□□□ -0.15
CNOT4-208ENST00000465721 GJA9P57773 515 aa14.12□□□□□ -0.15
CNOT4-208ENST00000465721 ACVR2BQ13705 512 aa14.12□□□□□ -0.15
CNOT4-208ENST00000465721 FAM126BQ8IXS8 530 aa14.12□□□□□ -0.15
CNOT4-208ENST00000465721 RPAP2Q8IXW5 612 aaPredicted RBP14.12□□□□□ -0.15
CNOT4-208ENST00000465721 DDX11Q96FC9 970 aa14.12□□□□□ -0.15
CNOT4-208ENST00000465721 KATNBL1Q9H079 304 aa14.12□□□□□ -0.15
CNOT4-208ENST00000465721 NYAP2Q9P242 653 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms