RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 MRGPRX3Q96LB0 322 aa2.93□□□□□ -1.94
NUCKS1-202ENST00000464938 SRPK1Q96SB4 655 aaKnown RBP2.93□□□□□ -1.94
NUCKS1-202ENST00000464938 DNAJC7Q99615 494 aa2.93□□□□□ -1.94
NUCKS1-202ENST00000464938 APBA2Q99767 749 aa2.93□□□□□ -1.94
NUCKS1-202ENST00000464938 PRDM14Q9GZV8 571 aa2.93□□□□□ -1.94
NUCKS1-202ENST00000464938 PAK6Q9NQU5 681 aaPredicted RBP2.93□□□□□ -1.94
NUCKS1-202ENST00000464938 ATG3Q9NT62 314 aa2.93□□□□□ -1.94
NUCKS1-202ENST00000464938 WHRNQ9P202 907 aa2.93□□□□□ -1.94
NUCKS1-202ENST00000464938 ANGEL1Q9UNK9 670 aaKnown RBP2.93□□□□□ -1.94
NUCKS1-202ENST00000464938 DIS3Q9Y2L1 958 aaKnown RBP2.93□□□□□ -1.94
NUCKS1-202ENST00000464938 ZNF281Q9Y2X9 895 aa2.93□□□□□ -1.94
NUCKS1-202ENST00000464938 SNX11Q9Y5W9 270 aa2.93□□□□□ -1.94
NUCKS1-202ENST00000464938 FHOD1Q9Y613 1164 aa2.93□□□□□ -1.94
NUCKS1-202ENST00000464938 SHROOM4Q9ULL8 1493 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 A0A1W2PQU0 124 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 SIGLEC6O43699 453 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 DIAPH1O60610 1272 aaKnown RBP2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 CBX7O95931 251 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 NAT2P11245 290 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 TCEAL1Q15170 157 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 KRTAP19-4Q3LI73 84 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 HEATR6Q6AI08 1181 aaKnown RBP2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 TMC3Q7Z5M5 1100 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 THAP5Q7Z6K1 395 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 MFSD4AQ8N468 514 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 DAGLBQ8NCG7 672 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 SPATA9Q9BWV2 254 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 OSBPL1AQ9BXW6 950 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 HDAC8Q9BY41 377 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 KRTAP9-8Q9BYQ0 159 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 SEMA3GQ9NS98 782 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 APEX2Q9UBZ4 518 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 KCNH3Q9ULD8 1083 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 TPX2Q9ULW0 747 aaKnown RBP2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 EMC9Q9Y3B6 208 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 PCDHB12Q9Y5F1 795 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 NCANO14594 1321 aa2.92□□□□□ -1.94
NUCKS1-202ENST00000464938 SHISA3A0PJX4 238 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 ENPP3O14638 875 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 PPM1BO75688 479 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 CEACAM5P06731 702 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 ITGAVP06756 1048 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 FAM153BP0C7A2 387 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 CTSKP43235 329 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 CLCN7P51798 805 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 CYP4F3Q08477 520 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 NMIQ13287 307 aaPredicted RBP2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 GRB10Q13322 594 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 SQSTM1Q13501 440 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 ZC3H12BQ5HYM0 836 aaKnown RBP2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 TSPYL5Q86VY4 417 aaPredicted RBP2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 TRIM59Q8IWR1 403 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 USHBP1Q8N6Y0 703 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 ZNF655Q8N720 491 aaPredicted RBP2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 FAM181AQ8N9Y4 354 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 ZBTB38Q8NAP3 1195 aaPredicted RBP2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 BVESQ8NE79 360 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 THAP3Q8WTV1 239 aaPredicted RBP2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 KISS1RQ969F8 398 aaPredicted RBP2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 FGD4Q96M96 766 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 MKRN2Q9H000 416 aaKnown RBP2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 KANSL2Q9H9L4 492 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 ARHGEF4Q9NR80 690 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 TMEM260Q9NX78 707 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 ZC3H7BQ9UGR2 993 aaKnown RBP2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 LEMD3Q9Y2U8 911 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 PITPNM2Q9BZ72 1349 aa2.91□□□□□ -1.94
NUCKS1-202ENST00000464938 TMEM265A0A087WTH1 108 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 IQCA1LA6NCM1 817 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 GNAT3A8MTJ3 354 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 WASH4PA8MWX3 477 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 CYP26A1O43174 497 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 PRAMEF1O95521 474 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 SCG5P05408 212 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 GSNP06396 782 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 FGFR1P11362 822 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 ITGA4P13612 1032 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 BMP8BP34820 402 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 IFRD2Q12894 506 aaPredicted RBP2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 TESK1Q15569 626 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 IFI16Q16666 785 aaKnown RBP2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 MTERF2Q49AM1 385 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 C2orf27AQ580R0 203 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 PLEKHG4Q58EX7 1191 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 FOXB2Q5VYV0 432 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 EGFLAMQ63HQ2 1017 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 SDE2Q6IQ49 451 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 ZNF227Q86WZ6 799 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 C1QL4Q86Z23 238 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 TP53INP2Q8IXH6 220 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 LRRC47Q8N1G4 583 aaKnown RBP2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 PLD6Q8N2A8 252 aaKnown RBP2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 LINC00116Q8NCU8 138 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 NETO1Q8TDF5 533 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 SH3TC2Q8TF17 1288 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 TCTN2Q96GX1 697 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 HSPA12BQ96MM6 686 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 GBP3Q9H0R5 595 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 CHST7Q9NS84 486 aa2.9□□□□□ -1.95
NUCKS1-202ENST00000464938 FAM86C1Q9NVL1 165 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms