RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 SRGAP1Q7Z6B7 1085 aa12.98□□□□□ -0.33
TRAPPC3-205ENST00000462715 PRPF38AQ8NAV1 312 aaKnown RBP12.98□□□□□ -0.33
TRAPPC3-205ENST00000462715 TCRBV5S4A2TA0A5A2 114 aa12.98□□□□□ -0.33
TRAPPC3-205ENST00000462715 PPP4CP60510 307 aa12.98□□□□□ -0.33
TRAPPC3-205ENST00000462715 ZKSCAN8Q15776 578 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC3-205ENST00000462715 CDC42EP5Q6NZY7 148 aa12.98□□□□□ -0.33
TRAPPC3-205ENST00000462715 TMC6Q7Z403 805 aa12.98□□□□□ -0.33
TRAPPC3-205ENST00000462715 CNNM3Q8NE01 707 aa12.98□□□□□ -0.33
TRAPPC3-205ENST00000462715 MIEF2Q96C03 454 aa12.98□□□□□ -0.33
TRAPPC3-205ENST00000462715 AATFQ9NY61 560 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRAPPC3-205ENST00000462715 RCOR1Q9UKL0 485 aa12.98□□□□□ -0.33
TRAPPC3-205ENST00000462715 PSMA5P28066 241 aa12.97□□□□□ -0.33
TRAPPC3-205ENST00000462715 GNL2Q13823 731 aaKnown RBP12.97□□□□□ -0.33
TRAPPC3-205ENST00000462715 MAP9Q49MG5 647 aa12.97□□□□□ -0.33
TRAPPC3-205ENST00000462715 FOXR1Q6PIV2 292 aa12.97□□□□□ -0.33
TRAPPC3-205ENST00000462715 ADGRA1Q86SQ6 560 aa12.97□□□□□ -0.33
TRAPPC3-205ENST00000462715 FAN1Q9Y2M0 1017 aa12.97□□□□□ -0.33
TRAPPC3-205ENST00000462715 PPP2R3BQ9Y5P8 575 aa12.97□□□□□ -0.33
TRAPPC3-205ENST00000462715 MAGEB6P1A0A0J9YX57 407 aa12.97□□□□□ -0.33
TRAPPC3-205ENST00000462715 IKBKBO14920 756 aa12.97□□□□□ -0.33
TRAPPC3-205ENST00000462715 LARGE1O95461 756 aa12.97□□□□□ -0.33
TRAPPC3-205ENST00000462715 CRYMQ14894 314 aa12.97□□□□□ -0.33
TRAPPC3-205ENST00000462715 TPRNQ4KMQ1 711 aa12.97□□□□□ -0.33
TRAPPC3-205ENST00000462715 CCDC73Q6ZRK6 1079 aa12.97□□□□□ -0.33
TRAPPC3-205ENST00000462715 CCAR1Q8IX12 1150 aaKnown RBP12.97□□□□□ -0.33
TRAPPC3-205ENST00000462715 AMOTL1Q8IY63 956 aa12.97□□□□□ -0.33
TRAPPC3-205ENST00000462715 MIGA1Q8NAN2 632 aa12.97□□□□□ -0.33
TRAPPC3-205ENST00000462715 APPBP2Q92624 585 aa12.97□□□□□ -0.33
TRAPPC3-205ENST00000462715 CABS1Q96KC9 395 aa12.97□□□□□ -0.33
TRAPPC3-205ENST00000462715 HIP1O00291 1037 aa12.96□□□□□ -0.33
TRAPPC3-205ENST00000462715 CHUKO15111 745 aa12.96□□□□□ -0.33
TRAPPC3-205ENST00000462715 KINO60870 393 aaKnown RBP12.96□□□□□ -0.33
TRAPPC3-205ENST00000462715 MCM3P25205 808 aa12.96□□□□□ -0.33
TRAPPC3-205ENST00000462715 ST3GAL1Q11201 340 aa12.96□□□□□ -0.33
TRAPPC3-205ENST00000462715 ME3Q16798 604 aa12.96□□□□□ -0.33
TRAPPC3-205ENST00000462715 TEX11Q8IYF3 940 aa12.96□□□□□ -0.33
TRAPPC3-205ENST00000462715 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
TRAPPC3-205ENST00000462715 AFAP1L1Q8TED9 768 aa12.96□□□□□ -0.33
TRAPPC3-205ENST00000462715 VWA3AA6NCI4 1184 aa12.96□□□□□ -0.34
TRAPPC3-205ENST00000462715 TCP10L2B9ZVM9 353 aa12.96□□□□□ -0.34
TRAPPC3-205ENST00000462715 EBAG9O00559 213 aa12.96□□□□□ -0.34
TRAPPC3-205ENST00000462715 ELF1P32519 619 aa12.96□□□□□ -0.34
TRAPPC3-205ENST00000462715 MRPL12P52815 198 aaKnown RBP12.96□□□□□ -0.34
TRAPPC3-205ENST00000462715 RHBDL3P58872 404 aa12.96□□□□□ -0.34
TRAPPC3-205ENST00000462715 FAM160A1Q05DH4 1040 aa12.96□□□□□ -0.34
TRAPPC3-205ENST00000462715 RESTQ13127 1097 aa12.96□□□□□ -0.34
TRAPPC3-205ENST00000462715 FAM83AQ86UY5 434 aa12.96□□□□□ -0.34
TRAPPC3-205ENST00000462715 AOPEPQ8N6M6 819 aa12.96□□□□□ -0.34
TRAPPC3-205ENST00000462715 AIDAQ96BJ3 306 aa12.96□□□□□ -0.34
TRAPPC3-205ENST00000462715 GLIS2Q9BZE0 524 aaPredicted RBP12.96□□□□□ -0.34
TRAPPC3-205ENST00000462715 XPO4Q9C0E2 1151 aaKnown RBP12.96□□□□□ -0.34
TRAPPC3-205ENST00000462715 DEFB129Q9H1M3 183 aa12.96□□□□□ -0.34
TRAPPC3-205ENST00000462715 MCM8Q9UJA3 840 aa12.96□□□□□ -0.34
TRAPPC3-205ENST00000462715 ANKRD33BA6NCL7 494 aa12.95□□□□□ -0.34
TRAPPC3-205ENST00000462715 ADM5C9JUS6 153 aa12.95□□□□□ -0.34
TRAPPC3-205ENST00000462715 GCFC2P16383 781 aaKnown RBP12.95□□□□□ -0.34
TRAPPC3-205ENST00000462715 CACNB3P54284 484 aa12.95□□□□□ -0.34
TRAPPC3-205ENST00000462715 ENGASEQ8NFI3 743 aa12.95□□□□□ -0.34
TRAPPC3-205ENST00000462715 SH3RF3Q8TEJ3 882 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC3-205ENST00000462715 KIFC2Q96AC6 838 aa12.95□□□□□ -0.34
TRAPPC3-205ENST00000462715 SGSM3Q96HU1 749 aa12.95□□□□□ -0.34
TRAPPC3-205ENST00000462715 IDI2Q9BXS1 227 aa12.95□□□□□ -0.34
TRAPPC3-205ENST00000462715 CHMP4BP1P59074 171 aa12.94□□□□□ -0.34
TRAPPC3-205ENST00000462715 DYNLL1P63167 89 aaKnown RBP12.94□□□□□ -0.34
TRAPPC3-205ENST00000462715 PREPLQ4J6C6 727 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC3-205ENST00000462715 KCNV1Q6PIU1 500 aa12.94□□□□□ -0.34
TRAPPC3-205ENST00000462715 RIOK1Q9BRS2 568 aaKnown RBP12.94□□□□□ -0.34
TRAPPC3-205ENST00000462715 CRNKL1Q9BZJ0 848 aaKnown RBP12.94□□□□□ -0.34
TRAPPC3-205ENST00000462715 PPP2R2CQ9Y2T4 447 aa12.94□□□□□ -0.34
TRAPPC3-205ENST00000462715 ENTPD3O75355 529 aa12.94□□□□□ -0.34
TRAPPC3-205ENST00000462715 NPM3O75607 178 aaKnown RBP12.94□□□□□ -0.34
TRAPPC3-205ENST00000462715 MBD4O95243 580 aa12.94□□□□□ -0.34
TRAPPC3-205ENST00000462715 ZKSCAN1P17029 563 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC3-205ENST00000462715 RASA3Q14644 834 aa12.94□□□□□ -0.34
TRAPPC3-205ENST00000462715 STX10O60499 249 aa12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 CUTAO60888 179 aa12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 WDHD1O75717 1129 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 FSBPO95073 299 aa12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 ITGBL1O95965 494 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 NFIAQ12857 509 aa12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 PICALMQ13492 652 aa12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 CASP8Q14790 479 aa12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 ZMYM1Q5SVZ6 1142 aa12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 RNF217Q8TC41 542 aa12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 MAGEC3Q8TD91 643 aa12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 FAM151AQ8WW52 585 aa12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 KAT2BQ92831 832 aa12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 IFNKQ9P0W0 207 aa12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 POLR2AP24928 1970 aaKnown RBP12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 NF2P35240 595 aa12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 RDXP35241 583 aaKnown RBP12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 WLSQ5T9L3 541 aa12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 WDR93Q6P2C0 686 aa12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 HOOK2Q96ED9 719 aa12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 JAKMIP1Q96N16 626 aaKnown RBP12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 PUS7LQ9H0K6 701 aaKnown RBP12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 ANKZF1Q9H8Y5 726 aa12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 HELLSQ9NRZ9 838 aa12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 SCAF8Q9UPN6 1271 aaKnown RBP12.93□□□□□ -0.34
TRAPPC3-205ENST00000462715 FAM169AQ9Y6X4 670 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms