RNA–Protein interactions for RNA: ENST00000461780.1

PPARGC1B-206, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 4

Gene PPARGC1B, Length 566 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-206ENST00000461780 DNAJB2P25686 324 aa18.3■□□□□ 0.52
PPARGC1B-206ENST00000461780 FPGSQ05932 587 aa18.3■□□□□ 0.52
PPARGC1B-206ENST00000461780 DNAJC2Q99543 621 aaKnown RBP18.3■□□□□ 0.52
PPARGC1B-206ENST00000461780 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.3■□□□□ 0.52
PPARGC1B-206ENST00000461780 SH2D4AQ9H788 454 aa18.3■□□□□ 0.52
PPARGC1B-206ENST00000461780 KANSL2Q9H9L4 492 aa18.3■□□□□ 0.52
PPARGC1B-206ENST00000461780 SYNGAP1Q96PV0 1343 aa18.29■□□□□ 0.52
PPARGC1B-206ENST00000461780 RAG1P15918 1043 aa18.29■□□□□ 0.52
PPARGC1B-206ENST00000461780 ATP5JP18859 108 aa18.29■□□□□ 0.52
PPARGC1B-206ENST00000461780 CST5P28325 142 aaPredicted RBP18.29■□□□□ 0.52
PPARGC1B-206ENST00000461780 FAM83BQ5T0W9 1011 aa18.29■□□□□ 0.52
PPARGC1B-206ENST00000461780 MSL3Q8N5Y2 521 aaKnown RBP18.29■□□□□ 0.52
PPARGC1B-206ENST00000461780 KIF1BPQ96EK5 621 aa18.29■□□□□ 0.52
PPARGC1B-206ENST00000461780 KATNBL1Q9H079 304 aa18.29■□□□□ 0.52
PPARGC1B-206ENST00000461780 PAG1Q9NWQ8 432 aa18.29■□□□□ 0.52
PPARGC1B-206ENST00000461780 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.28■□□□□ 0.52
PPARGC1B-206ENST00000461780 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.28■□□□□ 0.52
PPARGC1B-206ENST00000461780 ATP2A1O14983 1001 aa18.28■□□□□ 0.52
PPARGC1B-206ENST00000461780 TIMP1P01033 207 aa18.28■□□□□ 0.52
PPARGC1B-206ENST00000461780 NKX3-2P78367 333 aa18.28■□□□□ 0.52
PPARGC1B-206ENST00000461780 KCTD2Q14681 263 aa18.28■□□□□ 0.52
PPARGC1B-206ENST00000461780 UBE3CQ15386 1083 aa18.28■□□□□ 0.52
PPARGC1B-206ENST00000461780 KCNA10Q16322 511 aa18.28■□□□□ 0.52
PPARGC1B-206ENST00000461780 HSP90AB4PQ58FF6 505 aa18.28■□□□□ 0.52
PPARGC1B-206ENST00000461780 CLASRPQ8N2M8 674 aaKnown RBP18.28■□□□□ 0.52
PPARGC1B-206ENST00000461780 HAUS7Q99871 368 aa18.28■□□□□ 0.52
PPARGC1B-206ENST00000461780 PUS7LQ9H0K6 701 aaKnown RBP18.28■□□□□ 0.52
PPARGC1B-206ENST00000461780 UPF3AQ9H1J1 476 aaKnown RBP18.28■□□□□ 0.52
PPARGC1B-206ENST00000461780 TMEM39AQ9NV64 488 aa18.28■□□□□ 0.52
PPARGC1B-206ENST00000461780 XIRP2A4UGR9 3374 aa18.27■□□□□ 0.52
PPARGC1B-206ENST00000461780 IGKV6D-41A0A0C4DH26 115 aa18.27■□□□□ 0.52
PPARGC1B-206ENST00000461780 MOXD2PA6NHM9 499 aa18.27■□□□□ 0.52
PPARGC1B-206ENST00000461780 RASA1P20936 1047 aa18.27■□□□□ 0.52
PPARGC1B-206ENST00000461780 TMEM240Q5SV17 173 aa18.27■□□□□ 0.52
PPARGC1B-206ENST00000461780 ZNF467Q7Z7K2 595 aaPredicted RBP18.27■□□□□ 0.52
PPARGC1B-206ENST00000461780 NUP88Q99567 741 aaPredicted RBP18.27■□□□□ 0.52
PPARGC1B-206ENST00000461780 BOLA2Q9H3K6 86 aa18.27■□□□□ 0.52
PPARGC1B-206ENST00000461780 ZNF576Q9H609 170 aa18.27■□□□□ 0.52
PPARGC1B-206ENST00000461780 ZBTB40Q9NUA8 1239 aa18.27■□□□□ 0.52
PPARGC1B-206ENST00000461780 DUSP11O75319 330 aaKnown RBP18.26■□□□□ 0.51
PPARGC1B-206ENST00000461780 MFSD5Q6N075 450 aa18.26■□□□□ 0.51
PPARGC1B-206ENST00000461780 SAMD1Q6SPF0 538 aaPredicted RBP18.26■□□□□ 0.51
PPARGC1B-206ENST00000461780 STARD7Q9NQZ5 370 aa18.26■□□□□ 0.51
PPARGC1B-206ENST00000461780 ELP1O95163 1332 aa18.25■□□□□ 0.51
PPARGC1B-206ENST00000461780 COPB2P35606 906 aa18.25■□□□□ 0.51
PPARGC1B-206ENST00000461780 PBX2P40425 430 aa18.25■□□□□ 0.51
PPARGC1B-206ENST00000461780 SBK1Q52WX2 424 aa18.25■□□□□ 0.51
PPARGC1B-206ENST00000461780 FAM126BQ8IXS8 530 aa18.25■□□□□ 0.51
PPARGC1B-206ENST00000461780 RPAP2Q8IXW5 612 aaPredicted RBP18.25■□□□□ 0.51
PPARGC1B-206ENST00000461780 VWCEQ96DN2 955 aa18.25■□□□□ 0.51
PPARGC1B-206ENST00000461780 TEX13BQ9BXU2 312 aa18.25■□□□□ 0.51
PPARGC1B-206ENST00000461780 PBX4Q9BYU1 374 aa18.25■□□□□ 0.51
PPARGC1B-206ENST00000461780 GOPCQ9HD26 462 aa18.25■□□□□ 0.51
PPARGC1B-206ENST00000461780 NYAP2Q9P242 653 aa18.25■□□□□ 0.51
PPARGC1B-206ENST00000461780 FAM184BQ9ULE4 1060 aa18.25■□□□□ 0.51
PPARGC1B-206ENST00000461780 GSG1L2A8MUP6 293 aa18.24■□□□□ 0.51
PPARGC1B-206ENST00000461780 GRXCR1A8MXD5 290 aa18.24■□□□□ 0.51
PPARGC1B-206ENST00000461780 NDUFB10O96000 172 aa18.24■□□□□ 0.51
PPARGC1B-206ENST00000461780 CD4P01730 458 aa18.24■□□□□ 0.51
PPARGC1B-206ENST00000461780 IFIT2P09913 472 aaKnown RBP18.24■□□□□ 0.51
PPARGC1B-206ENST00000461780 GJA9P57773 515 aa18.24■□□□□ 0.51
PPARGC1B-206ENST00000461780 TJAP1Q5JTD0 557 aa18.24■□□□□ 0.51
PPARGC1B-206ENST00000461780 SNRNP48Q6IEG0 339 aaKnown RBP18.24■□□□□ 0.51
PPARGC1B-206ENST00000461780 SYMPKQ92797 1274 aaKnown RBP18.24■□□□□ 0.51
PPARGC1B-206ENST00000461780 STRBPQ96SI9 672 aaKnown RBP18.24■□□□□ 0.51
PPARGC1B-206ENST00000461780 SLF1Q9BQI6 1058 aa18.24■□□□□ 0.51
PPARGC1B-206ENST00000461780 CNPY2Q9Y2B0 182 aa18.24■□□□□ 0.51
PPARGC1B-206ENST00000461780 SLC4A4Q9Y6R1 1079 aa18.24■□□□□ 0.51
PPARGC1B-206ENST00000461780 ASTN1O14525 1302 aa18.23■□□□□ 0.51
PPARGC1B-206ENST00000461780 DCDC2CA8MYV0 355 aa18.23■□□□□ 0.51
PPARGC1B-206ENST00000461780 F5H6K3 240 aa18.23■□□□□ 0.51
PPARGC1B-206ENST00000461780 APBB1O00213 710 aa18.23■□□□□ 0.51
PPARGC1B-206ENST00000461780 ASGR1P07306 291 aa18.23■□□□□ 0.51
PPARGC1B-206ENST00000461780 CSF2RAP15509 400 aa18.23■□□□□ 0.51
PPARGC1B-206ENST00000461780 KLRC3Q07444 240 aa18.23■□□□□ 0.51
PPARGC1B-206ENST00000461780 ACVR2BQ13705 512 aa18.23■□□□□ 0.51
PPARGC1B-206ENST00000461780 ADGRE1Q14246 886 aa18.23■□□□□ 0.51
PPARGC1B-206ENST00000461780 SLC43A3Q8NBI5 491 aa18.23■□□□□ 0.51
PPARGC1B-206ENST00000461780 NUP133Q8WUM0 1156 aa18.23■□□□□ 0.51
PPARGC1B-206ENST00000461780 MKL1Q969V6 931 aa18.23■□□□□ 0.51
PPARGC1B-206ENST00000461780 TIFAQ96CG3 184 aa18.23■□□□□ 0.51
PPARGC1B-206ENST00000461780 SLC38A10Q9HBR0 1119 aa18.23■□□□□ 0.51
PPARGC1B-206ENST00000461780 RAB11FIP3O75154 756 aa18.22■□□□□ 0.51
PPARGC1B-206ENST00000461780 CCDC144BQ3MJ40 725 aa18.22■□□□□ 0.51
PPARGC1B-206ENST00000461780 PRPF38AQ8NAV1 312 aaKnown RBP18.22■□□□□ 0.51
PPARGC1B-206ENST00000461780 EPB41L4AQ9HCS5 686 aaPredicted RBP18.22■□□□□ 0.51
PPARGC1B-206ENST00000461780 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.22■□□□□ 0.51
PPARGC1B-206ENST00000461780 ARVCFO00192 962 aa18.21■□□□□ 0.51
PPARGC1B-206ENST00000461780 ABHD16BQ9H3Z7 469 aa18.21■□□□□ 0.51
PPARGC1B-206ENST00000461780 ARPP21Q9UBL0 812 aaPredicted RBP18.21■□□□□ 0.51
PPARGC1B-206ENST00000461780 GRIN2DO15399 1336 aa18.21■□□□□ 0.51
PPARGC1B-206ENST00000461780 TCF20Q9UGU0 1960 aaKnown RBP18.21■□□□□ 0.5
PPARGC1B-206ENST00000461780 SCN5AQ14524 2016 aa18.2■□□□□ 0.5
PPARGC1B-206ENST00000461780 AKNAD1Q5T1N1 836 aa18.2■□□□□ 0.5
PPARGC1B-206ENST00000461780 ZNF365Q70YC5 407 aa18.2■□□□□ 0.5
PPARGC1B-206ENST00000461780 FAM133AQ8N9E0 248 aa18.2■□□□□ 0.5
PPARGC1B-206ENST00000461780 OSBP2Q969R2 916 aa18.2■□□□□ 0.5
PPARGC1B-206ENST00000461780 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.2■□□□□ 0.5
PPARGC1B-206ENST00000461780 RAVER2Q9HCJ3 691 aaKnown RBP18.2■□□□□ 0.5
PPARGC1B-206ENST00000461780 CXXC1Q9P0U4 656 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms