RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 CXXC1Q9P0U4 656 aaPredicted RBP14.36□□□□□ -0.11
HCFC1-204ENST00000461098 PPP1R9AQ9ULJ8 1098 aa14.36□□□□□ -0.11
HCFC1-204ENST00000461098 ZNF532Q9HCE3 1301 aa14.36□□□□□ -0.11
HCFC1-204ENST00000461098 BAZ2AQ9UIF9 1905 aaKnown RBP14.35□□□□□ -0.11
HCFC1-204ENST00000461098 CTAGE5O15320 804 aa14.35□□□□□ -0.11
HCFC1-204ENST00000461098 PRKAB2O43741 272 aa14.35□□□□□ -0.11
HCFC1-204ENST00000461098 DUSP11O75319 330 aaKnown RBP14.35□□□□□ -0.11
HCFC1-204ENST00000461098 ASGR1P07306 291 aa14.35□□□□□ -0.11
HCFC1-204ENST00000461098 EEF2P13639 858 aaKnown RBP14.35□□□□□ -0.11
HCFC1-204ENST00000461098 CCDC129Q6ZRS4 1044 aa14.35□□□□□ -0.11
HCFC1-204ENST00000461098 FAM126BQ8IXS8 530 aa14.35□□□□□ -0.11
HCFC1-204ENST00000461098 MSL3Q8N5Y2 521 aaKnown RBP14.35□□□□□ -0.11
HCFC1-204ENST00000461098 FAM184BQ9ULE4 1060 aa14.35□□□□□ -0.11
HCFC1-204ENST00000461098 CNPY2Q9Y2B0 182 aa14.35□□□□□ -0.11
HCFC1-204ENST00000461098 RIPK3Q9Y572 518 aa14.35□□□□□ -0.11
HCFC1-204ENST00000461098 SYNGAP1Q96PV0 1343 aa14.35□□□□□ -0.11
HCFC1-204ENST00000461098 CYP2D7A0A087X1C5 515 aa14.34□□□□□ -0.11
HCFC1-204ENST00000461098 ARVCFO00192 962 aa14.34□□□□□ -0.11
HCFC1-204ENST00000461098 BMP1P13497 986 aa14.34□□□□□ -0.11
HCFC1-204ENST00000461098 CDK8P49336 464 aa14.34□□□□□ -0.11
HCFC1-204ENST00000461098 SLFNL1Q499Z3 407 aa14.34□□□□□ -0.11
HCFC1-204ENST00000461098 HERVK_113Q902F9 699 aa14.34□□□□□ -0.11
HCFC1-204ENST00000461098 FGD4Q96M96 766 aa14.34□□□□□ -0.11
HCFC1-204ENST00000461098 NECAB3Q96P71 396 aaPredicted RBP14.34□□□□□ -0.11
HCFC1-204ENST00000461098 UPF3AQ9H1J1 476 aaKnown RBP14.34□□□□□ -0.11
HCFC1-204ENST00000461098 SH2D4AQ9H788 454 aa14.34□□□□□ -0.11
HCFC1-204ENST00000461098 YBX2Q9Y2T7 364 aaKnown RBP14.34□□□□□ -0.11
HCFC1-204ENST00000461098 MROH7Q68CQ1 1323 aa14.34□□□□□ -0.11
HCFC1-204ENST00000461098 TCF20Q9UGU0 1960 aaKnown RBP14.33□□□□□ -0.12
HCFC1-204ENST00000461098 CD4P01730 458 aa14.33□□□□□ -0.12
HCFC1-204ENST00000461098 HOXD11P31277 338 aaPredicted RBP14.33□□□□□ -0.12
HCFC1-204ENST00000461098 GJA9P57773 515 aa14.33□□□□□ -0.12
HCFC1-204ENST00000461098 TTF1Q15361 905 aaPredicted RBP14.33□□□□□ -0.12
HCFC1-204ENST00000461098 FAM83BQ5T0W9 1011 aa14.33□□□□□ -0.12
HCFC1-204ENST00000461098 C12orf60Q5U649 245 aa14.33□□□□□ -0.12
HCFC1-204ENST00000461098 AACSQ86V21 672 aa14.33□□□□□ -0.12
HCFC1-204ENST00000461098 TMEM199Q8N511 208 aa14.33□□□□□ -0.12
HCFC1-204ENST00000461098 FAM122AQ96E09 287 aa14.33□□□□□ -0.12
HCFC1-204ENST00000461098 CCDC17Q96LX7 622 aa14.33□□□□□ -0.12
HCFC1-204ENST00000461098 GLT1D1Q96MS3 346 aa14.33□□□□□ -0.12
HCFC1-204ENST00000461098 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.33□□□□□ -0.12
HCFC1-204ENST00000461098 PPP1R12CQ9BZL4 782 aa14.33□□□□□ -0.12
HCFC1-204ENST00000461098 NKX2-4Q9H2Z4 354 aa14.33□□□□□ -0.12
HCFC1-204ENST00000461098 ARMT1Q9H993 441 aa14.33□□□□□ -0.12
HCFC1-204ENST00000461098 A0A0U1RQG5 324 aaPredicted RBP14.32□□□□□ -0.12
HCFC1-204ENST00000461098 C6orf222P0C671 652 aaPredicted RBP14.32□□□□□ -0.12
HCFC1-204ENST00000461098 IGFBP4P22692 258 aa14.32□□□□□ -0.12
HCFC1-204ENST00000461098 CYP2C18P33260 490 aa14.32□□□□□ -0.12
HCFC1-204ENST00000461098 COPB2P35606 906 aa14.32□□□□□ -0.12
HCFC1-204ENST00000461098 NKX3-2P78367 333 aa14.32□□□□□ -0.12
HCFC1-204ENST00000461098 ACVR2BQ13705 512 aa14.32□□□□□ -0.12
HCFC1-204ENST00000461098 PSRC1Q6PGN9 363 aaPredicted RBP14.32□□□□□ -0.12
HCFC1-204ENST00000461098 CCDC174Q6PII3 467 aa14.32□□□□□ -0.12
HCFC1-204ENST00000461098 C16orf86Q6ZW13 317 aa14.32□□□□□ -0.12
HCFC1-204ENST00000461098 VWCEQ96DN2 955 aa14.32□□□□□ -0.12
HCFC1-204ENST00000461098 KATNBL1Q9H079 304 aa14.32□□□□□ -0.12
HCFC1-204ENST00000461098 IL23AQ9NPF7 189 aa14.32□□□□□ -0.12
HCFC1-204ENST00000461098 ZHX1Q9UKY1 873 aaPredicted RBP14.32□□□□□ -0.12
HCFC1-204ENST00000461098 EXOC6BQ9Y2D4 811 aa14.32□□□□□ -0.12
HCFC1-204ENST00000461098 GREB1LQ9C091 1923 aaPredicted RBP14.32□□□□□ -0.12
HCFC1-204ENST00000461098 MCM3APO60318 1980 aa14.32□□□□□ -0.12
HCFC1-204ENST00000461098 UMODL1Q5DID0 1318 aa14.32□□□□□ -0.12
HCFC1-204ENST00000461098 CHGBP05060 677 aa14.31□□□□□ -0.12
HCFC1-204ENST00000461098 RLBP1P12271 317 aa14.31□□□□□ -0.12
HCFC1-204ENST00000461098 RAB30Q15771 203 aa14.31□□□□□ -0.12
HCFC1-204ENST00000461098 CCDC144BQ3MJ40 725 aa14.31□□□□□ -0.12
HCFC1-204ENST00000461098 ZKSCAN2Q63HK3 967 aa14.31□□□□□ -0.12
HCFC1-204ENST00000461098 CEP85Q6P2H3 762 aa14.31□□□□□ -0.12
HCFC1-204ENST00000461098 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.31□□□□□ -0.12
HCFC1-204ENST00000461098 ZNF467Q7Z7K2 595 aaPredicted RBP14.31□□□□□ -0.12
HCFC1-204ENST00000461098 SLC43A3Q8NBI5 491 aa14.31□□□□□ -0.12
HCFC1-204ENST00000461098 PCSK9Q8NBP7 692 aaKnown RBP14.31□□□□□ -0.12
HCFC1-204ENST00000461098 NUP88Q99567 741 aaPredicted RBP14.31□□□□□ -0.12
HCFC1-204ENST00000461098 TEX13BQ9BXU2 312 aa14.31□□□□□ -0.12
HCFC1-204ENST00000461098 KANSL2Q9H9L4 492 aa14.31□□□□□ -0.12
HCFC1-204ENST00000461098 ATP8A2Q9NTI2 1148 aa14.31□□□□□ -0.12
HCFC1-204ENST00000461098 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.31□□□□□ -0.12
HCFC1-204ENST00000461098 USP17L12C9JPN9 530 aa14.3□□□□□ -0.12
HCFC1-204ENST00000461098 USP17L21D6R901 530 aa14.3□□□□□ -0.12
HCFC1-204ENST00000461098 GOLIM4O00461 696 aa14.3□□□□□ -0.12
HCFC1-204ENST00000461098 TFF2Q03403 129 aa14.3□□□□□ -0.12
HCFC1-204ENST00000461098 GNASQ5JWF2 1037 aa14.3□□□□□ -0.12
HCFC1-204ENST00000461098 SNRNP48Q6IEG0 339 aaKnown RBP14.3□□□□□ -0.12
HCFC1-204ENST00000461098 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.3□□□□□ -0.12
HCFC1-204ENST00000461098 SLC28A3Q9HAS3 691 aa14.3□□□□□ -0.12
HCFC1-204ENST00000461098 IL1RAPL2Q9NP60 686 aa14.3□□□□□ -0.12
HCFC1-204ENST00000461098 MSRAQ9UJ68 235 aa14.3□□□□□ -0.12
HCFC1-204ENST00000461098 ZBED9Q6R2W3 1325 aa14.3□□□□□ -0.12
HCFC1-204ENST00000461098 ATP2A1O14983 1001 aa14.29□□□□□ -0.12
HCFC1-204ENST00000461098 MBD4O95243 580 aa14.29□□□□□ -0.12
HCFC1-204ENST00000461098 FGBP02675 491 aa14.29□□□□□ -0.12
HCFC1-204ENST00000461098 MYOGP15173 224 aa14.29□□□□□ -0.12
HCFC1-204ENST00000461098 ADD2P35612 726 aa14.29□□□□□ -0.12
HCFC1-204ENST00000461098 RABGGTBP53611 331 aa14.29□□□□□ -0.12
HCFC1-204ENST00000461098 VTI1AQ96AJ9 217 aa14.29□□□□□ -0.12
HCFC1-204ENST00000461098 DDX11Q96FC9 970 aa14.29□□□□□ -0.12
HCFC1-204ENST00000461098 SLF1Q9BQI6 1058 aa14.29□□□□□ -0.12
HCFC1-204ENST00000461098 ABHD16BQ9H3Z7 469 aa14.29□□□□□ -0.12
HCFC1-204ENST00000461098 GOPCQ9HD26 462 aa14.29□□□□□ -0.12
HCFC1-204ENST00000461098 ASTN1O14525 1302 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms