RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 ANKRD65E5RJM6 399 aa22.03■■□□□ 1.12
CNEP1R1-203ENST00000458059 ATP8B1O43520 1251 aa22.03■■□□□ 1.12
CNEP1R1-203ENST00000458059 FAM193AP78312 1265 aa22.03■■□□□ 1.12
CNEP1R1-203ENST00000458059 CYP27A1Q02318 531 aa22.03■■□□□ 1.12
CNEP1R1-203ENST00000458059 HDXQ7Z353 690 aa22.03■■□□□ 1.12
CNEP1R1-203ENST00000458059 IRF2BP1Q8IU81 584 aa22.03■■□□□ 1.12
CNEP1R1-203ENST00000458059 BBXQ8WY36 941 aaPredicted RBP22.03■■□□□ 1.12
CNEP1R1-203ENST00000458059 DRC1Q96MC2 740 aa22.03■■□□□ 1.12
CNEP1R1-203ENST00000458059 LIMA1Q9UHB6 759 aaKnown RBP22.03■■□□□ 1.12
CNEP1R1-203ENST00000458059 DUSP10Q9Y6W6 482 aa22.03■■□□□ 1.12
CNEP1R1-203ENST00000458059 NDUFA10O95299 355 aa22.02■■□□□ 1.12
CNEP1R1-203ENST00000458059 ADAMTS2O95450 1211 aa22.02■■□□□ 1.12
CNEP1R1-203ENST00000458059 ATP1A1P05023 1023 aaKnown RBP22.02■■□□□ 1.12
CNEP1R1-203ENST00000458059 CCDC122Q5T0U0 273 aa22.02■■□□□ 1.12
CNEP1R1-203ENST00000458059 HEATR3Q7Z4Q2 680 aa22.02■■□□□ 1.12
CNEP1R1-203ENST00000458059 DCP1AQ9NPI6 582 aaPredicted RBP22.02■■□□□ 1.12
CNEP1R1-203ENST00000458059 AGPAT5Q9NUQ2 364 aa22.02■■□□□ 1.12
CNEP1R1-203ENST00000458059 TMEM51Q9NW97 253 aa22.02■■□□□ 1.12
CNEP1R1-203ENST00000458059 ZNF658Q5TYW1 1059 aaPredicted RBP22.02■■□□□ 1.12
CNEP1R1-203ENST00000458059 FOXR1Q6PIV2 292 aa22.02■■□□□ 1.12
CNEP1R1-203ENST00000458059 ANAPC4Q9UJX5 808 aa22.02■■□□□ 1.12
CNEP1R1-203ENST00000458059 LOC102724428A0A0B4J2F2 783 aa22.02■■□□□ 1.11
CNEP1R1-203ENST00000458059 MACROD2A1Z1Q3 448 aa22.02■■□□□ 1.11
CNEP1R1-203ENST00000458059 USP17L3A6NCW0 530 aa22.02■■□□□ 1.11
CNEP1R1-203ENST00000458059 USP17L4A6NCW7 530 aa22.02■■□□□ 1.11
CNEP1R1-203ENST00000458059 TRIM66O15016 1216 aa22.02■■□□□ 1.11
CNEP1R1-203ENST00000458059 SIK1P57059 783 aa22.02■■□□□ 1.11
CNEP1R1-203ENST00000458059 CASP8Q14790 479 aa22.02■■□□□ 1.11
CNEP1R1-203ENST00000458059 USP17L1Q7RTZ2 530 aa22.02■■□□□ 1.11
CNEP1R1-203ENST00000458059 SLC44A5Q8NCS7 719 aa22.02■■□□□ 1.11
CNEP1R1-203ENST00000458059 LRRIQ3A6PVS8 624 aaPredicted RBP22.01■■□□□ 1.11
CNEP1R1-203ENST00000458059 MAP2K7O14733 419 aa22.01■■□□□ 1.11
CNEP1R1-203ENST00000458059 ZNF185O15231 689 aa22.01■■□□□ 1.11
CNEP1R1-203ENST00000458059 FKBP15Q5T1M5 1219 aa22.01■■□□□ 1.11
CNEP1R1-203ENST00000458059 KIAA1328Q86T90 577 aa22.01■■□□□ 1.11
CNEP1R1-203ENST00000458059 RIN2Q8WYP3 895 aaPredicted RBP22.01■■□□□ 1.11
CNEP1R1-203ENST00000458059 MINPP1Q9UNW1 487 aa22.01■■□□□ 1.11
CNEP1R1-203ENST00000458059 LUC7L2Q9Y383 392 aaKnown RBP22.01■■□□□ 1.11
CNEP1R1-203ENST00000458059 ERLIN1O75477 346 aa22.01■■□□□ 1.11
CNEP1R1-203ENST00000458059 TFAP4Q01664 338 aa22.01■■□□□ 1.11
CNEP1R1-203ENST00000458059 CCDC178Q5BJE1 867 aa22.01■■□□□ 1.11
CNEP1R1-203ENST00000458059 AK7Q96M32 723 aa22.01■■□□□ 1.11
CNEP1R1-203ENST00000458059 MMS19Q96T76 1030 aa22.01■■□□□ 1.11
CNEP1R1-203ENST00000458059 PSMB7Q99436 277 aa22.01■■□□□ 1.11
CNEP1R1-203ENST00000458059 CICQ96RK0 1608 aaPredicted RBP22.01■■□□□ 1.11
CNEP1R1-203ENST00000458059 CCDC194A0A1B0GVG4 234 aa22■■□□□ 1.11
CNEP1R1-203ENST00000458059 BMP15O95972 392 aa22■■□□□ 1.11
CNEP1R1-203ENST00000458059 C10orf67Q8IYJ2 551 aa22■■□□□ 1.11
CNEP1R1-203ENST00000458059 BLIDQ8IZY5 108 aa22■■□□□ 1.11
CNEP1R1-203ENST00000458059 L1RE1Q9UN81 338 aa22■■□□□ 1.11
CNEP1R1-203ENST00000458059 STX8Q9UNK0 236 aa22■■□□□ 1.11
CNEP1R1-203ENST00000458059 TIAM2Q8IVF5 1701 aa22■■□□□ 1.11
CNEP1R1-203ENST00000458059 UBA7P41226 1012 aa22■■□□□ 1.11
CNEP1R1-203ENST00000458059 LRRC15Q8TF66 581 aa22■■□□□ 1.11
CNEP1R1-203ENST00000458059 KCNQ2O43526 872 aa21.99■■□□□ 1.11
CNEP1R1-203ENST00000458059 TRIM21P19474 475 aaKnown RBP21.99■■□□□ 1.11
CNEP1R1-203ENST00000458059 PFKFB3Q16875 520 aaPredicted RBP21.99■■□□□ 1.11
CNEP1R1-203ENST00000458059 TXNRD3Q86VQ6 643 aa21.99■■□□□ 1.11
CNEP1R1-203ENST00000458059 NSUN4Q96CB9 384 aaKnown RBP21.99■■□□□ 1.11
CNEP1R1-203ENST00000458059 KAT14Q9H8E8 782 aa21.99■■□□□ 1.11
CNEP1R1-203ENST00000458059 CALM1P0DP23 149 aa21.99■■□□□ 1.11
CNEP1R1-203ENST00000458059 CALM2P0DP24 149 aa21.99■■□□□ 1.11
CNEP1R1-203ENST00000458059 CALM3P0DP25 149 aa21.99■■□□□ 1.11
CNEP1R1-203ENST00000458059 RCAN1P53805 252 aa21.99■■□□□ 1.11
CNEP1R1-203ENST00000458059 SMCR8Q8TEV9 937 aaPredicted RBP21.99■■□□□ 1.11
CNEP1R1-203ENST00000458059 DOCK2Q92608 1830 aa21.99■■□□□ 1.11
CNEP1R1-203ENST00000458059 RCCD1A6NED2 376 aa21.99■■□□□ 1.11
CNEP1R1-203ENST00000458059 TSR1Q2NL82 804 aaKnown RBP21.99■■□□□ 1.11
CNEP1R1-203ENST00000458059 NAALADL2Q58DX5 795 aa21.99■■□□□ 1.11
CNEP1R1-203ENST00000458059 MB21D1Q8N884 522 aa21.99■■□□□ 1.11
CNEP1R1-203ENST00000458059 CAGE1Q8TC20 777 aa21.99■■□□□ 1.11
CNEP1R1-203ENST00000458059 LACRTQ9GZZ8 138 aa21.99■■□□□ 1.11
CNEP1R1-203ENST00000458059 VAT1LQ9HCJ6 419 aa21.99■■□□□ 1.11
CNEP1R1-203ENST00000458059 DDAH1O94760 285 aa21.98■■□□□ 1.11
CNEP1R1-203ENST00000458059 HERVK_113P62684 666 aa21.98■■□□□ 1.11
CNEP1R1-203ENST00000458059 PPP2R5BQ15173 497 aa21.98■■□□□ 1.11
CNEP1R1-203ENST00000458059 DTHD1Q6ZMT9 781 aa21.98■■□□□ 1.11
CNEP1R1-203ENST00000458059 OR8K1Q8NGG5 319 aa21.98■■□□□ 1.11
CNEP1R1-203ENST00000458059 CCDC51Q96ER9 411 aa21.98■■□□□ 1.11
CNEP1R1-203ENST00000458059 UIMC1Q96RL1 719 aa21.98■■□□□ 1.11
CNEP1R1-203ENST00000458059 BRIP1Q9BX63 1249 aa21.98■■□□□ 1.11
CNEP1R1-203ENST00000458059 DISC1Q9NRI5 854 aa21.98■■□□□ 1.11
CNEP1R1-203ENST00000458059 ANKRD36CQ5JPF3 1778 aa21.98■■□□□ 1.11
CNEP1R1-203ENST00000458059 HSP90B2PQ58FF3 399 aa21.98■■□□□ 1.11
CNEP1R1-203ENST00000458059 MSANTD4Q8NCY6 345 aa21.98■■□□□ 1.11
CNEP1R1-203ENST00000458059 SEMA3EO15041 775 aa21.97■■□□□ 1.11
CNEP1R1-203ENST00000458059 SPAG1Q07617 926 aa21.97■■□□□ 1.11
CNEP1R1-203ENST00000458059 PARP10Q53GL7 1025 aa21.97■■□□□ 1.11
CNEP1R1-203ENST00000458059 RCSD1Q6JBY9 416 aa21.97■■□□□ 1.11
CNEP1R1-203ENST00000458059 KRT26Q7Z3Y9 468 aa21.97■■□□□ 1.11
CNEP1R1-203ENST00000458059 SAP30BPQ9UHR5 308 aaKnown RBP21.97■■□□□ 1.11
CNEP1R1-203ENST00000458059 ITIH6Q6UXX5 1313 aa21.97■■□□□ 1.11
CNEP1R1-203ENST00000458059 WDR59Q6PJI9 974 aa21.97■■□□□ 1.11
CNEP1R1-203ENST00000458059 PNMA1Q8ND90 353 aa21.97■■□□□ 1.11
CNEP1R1-203ENST00000458059 MTA3Q9BTC8 594 aa21.97■■□□□ 1.11
CNEP1R1-203ENST00000458059 CRNKL1Q9BZJ0 848 aaKnown RBP21.97■■□□□ 1.11
CNEP1R1-203ENST00000458059 RABEP2Q9H5N1 569 aa21.97■■□□□ 1.11
CNEP1R1-203ENST00000458059 MAGEC2Q9UBF1 373 aaPredicted RBP21.97■■□□□ 1.11
CNEP1R1-203ENST00000458059 BCORQ6W2J9 1755 aa21.96■■□□□ 1.11
CNEP1R1-203ENST00000458059 FCER1AP12319 257 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms