RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 ZNF365Q70YC5 407 aa20.8■□□□□ 0.92
UBE2D4-209ENST00000454428 UHRF1Q96T88 793 aaPredicted RBP20.8■□□□□ 0.92
UBE2D4-209ENST00000454428 SH2D4AQ9H788 454 aa20.8■□□□□ 0.92
UBE2D4-209ENST00000454428 ELP1O95163 1332 aa20.79■□□□□ 0.92
UBE2D4-209ENST00000454428 DNAJC25-GNG10A0A024R161 153 aa20.79■□□□□ 0.92
UBE2D4-209ENST00000454428 CYP2D7A0A087X1C5 515 aa20.79■□□□□ 0.92
UBE2D4-209ENST00000454428 PRKAB2O43741 272 aa20.79■□□□□ 0.92
UBE2D4-209ENST00000454428 EEF2P13639 858 aaKnown RBP20.79■□□□□ 0.92
UBE2D4-209ENST00000454428 CST5P28325 142 aaPredicted RBP20.79■□□□□ 0.92
UBE2D4-209ENST00000454428 SLFNL1Q499Z3 407 aa20.79■□□□□ 0.92
UBE2D4-209ENST00000454428 MAMDC4Q6UXC1 1216 aa20.79■□□□□ 0.92
UBE2D4-209ENST00000454428 AACSQ86V21 672 aa20.79■□□□□ 0.92
UBE2D4-209ENST00000454428 MSL3Q8N5Y2 521 aaKnown RBP20.79■□□□□ 0.92
UBE2D4-209ENST00000454428 CXXC1Q9P0U4 656 aaPredicted RBP20.79■□□□□ 0.92
UBE2D4-209ENST00000454428 FAM184BQ9ULE4 1060 aa20.79■□□□□ 0.92
UBE2D4-209ENST00000454428 TCF20Q9UGU0 1960 aaKnown RBP20.79■□□□□ 0.92
UBE2D4-209ENST00000454428 SYNGAP1Q96PV0 1343 aa20.78■□□□□ 0.92
UBE2D4-209ENST00000454428 GREB1LQ9C091 1923 aaPredicted RBP20.78■□□□□ 0.92
UBE2D4-209ENST00000454428 DUSP11O75319 330 aaKnown RBP20.78■□□□□ 0.92
UBE2D4-209ENST00000454428 CDK8P49336 464 aa20.78■□□□□ 0.92
UBE2D4-209ENST00000454428 FAM126BQ8IXS8 530 aa20.78■□□□□ 0.92
UBE2D4-209ENST00000454428 ARMT1Q9H993 441 aa20.78■□□□□ 0.92
UBE2D4-209ENST00000454428 RIPK3Q9Y572 518 aa20.78■□□□□ 0.92
UBE2D4-209ENST00000454428 MROH7Q68CQ1 1323 aa20.78■□□□□ 0.92
UBE2D4-209ENST00000454428 CTAGE5O15320 804 aa20.77■□□□□ 0.92
UBE2D4-209ENST00000454428 ASGR1P07306 291 aa20.77■□□□□ 0.92
UBE2D4-209ENST00000454428 FAM83BQ5T0W9 1011 aa20.77■□□□□ 0.92
UBE2D4-209ENST00000454428 FGD4Q96M96 766 aa20.77■□□□□ 0.92
UBE2D4-209ENST00000454428 GLT1D1Q96MS3 346 aa20.77■□□□□ 0.92
UBE2D4-209ENST00000454428 NECAB3Q96P71 396 aaPredicted RBP20.77■□□□□ 0.92
UBE2D4-209ENST00000454428 UPF3AQ9H1J1 476 aaKnown RBP20.77■□□□□ 0.92
UBE2D4-209ENST00000454428 EXOC6BQ9Y2D4 811 aa20.77■□□□□ 0.92
UBE2D4-209ENST00000454428 YBX2Q9Y2T7 364 aaKnown RBP20.77■□□□□ 0.92
UBE2D4-209ENST00000454428 ARVCFO00192 962 aa20.76■□□□□ 0.91
UBE2D4-209ENST00000454428 TTF1Q15361 905 aaPredicted RBP20.76■□□□□ 0.91
UBE2D4-209ENST00000454428 C12orf60Q5U649 245 aa20.76■□□□□ 0.91
UBE2D4-209ENST00000454428 ZKSCAN2Q63HK3 967 aa20.76■□□□□ 0.91
UBE2D4-209ENST00000454428 PSRC1Q6PGN9 363 aaPredicted RBP20.76■□□□□ 0.91
UBE2D4-209ENST00000454428 TMEM199Q8N511 208 aa20.76■□□□□ 0.91
UBE2D4-209ENST00000454428 HERVK_113Q902F9 699 aa20.76■□□□□ 0.91
UBE2D4-209ENST00000454428 CCDC17Q96LX7 622 aa20.76■□□□□ 0.91
UBE2D4-209ENST00000454428 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.76■□□□□ 0.91
UBE2D4-209ENST00000454428 PPP1R12CQ9BZL4 782 aa20.76■□□□□ 0.91
UBE2D4-209ENST00000454428 NKX2-4Q9H2Z4 354 aa20.76■□□□□ 0.91
UBE2D4-209ENST00000454428 ZHX1Q9UKY1 873 aaPredicted RBP20.76■□□□□ 0.91
UBE2D4-209ENST00000454428 CD4P01730 458 aa20.75■□□□□ 0.91
UBE2D4-209ENST00000454428 C6orf222P0C671 652 aaPredicted RBP20.75■□□□□ 0.91
UBE2D4-209ENST00000454428 RLBP1P12271 317 aa20.75■□□□□ 0.91
UBE2D4-209ENST00000454428 IGFBP4P22692 258 aa20.75■□□□□ 0.91
UBE2D4-209ENST00000454428 CYP2C18P33260 490 aa20.75■□□□□ 0.91
UBE2D4-209ENST00000454428 COPB2P35606 906 aa20.75■□□□□ 0.91
UBE2D4-209ENST00000454428 GJA9P57773 515 aa20.75■□□□□ 0.91
UBE2D4-209ENST00000454428 CEP85Q6P2H3 762 aa20.75■□□□□ 0.91
UBE2D4-209ENST00000454428 CCDC174Q6PII3 467 aa20.75■□□□□ 0.91
UBE2D4-209ENST00000454428 C16orf86Q6ZW13 317 aa20.75■□□□□ 0.91
UBE2D4-209ENST00000454428 IL1RAPL2Q9NP60 686 aa20.75■□□□□ 0.91
UBE2D4-209ENST00000454428 A0A0U1RQG5 324 aaPredicted RBP20.74■□□□□ 0.91
UBE2D4-209ENST00000454428 GOLIM4O00461 696 aa20.74■□□□□ 0.91
UBE2D4-209ENST00000454428 BMP1P13497 986 aa20.74■□□□□ 0.91
UBE2D4-209ENST00000454428 ACVR2BQ13705 512 aa20.74■□□□□ 0.91
UBE2D4-209ENST00000454428 RAB30Q15771 203 aa20.74■□□□□ 0.91
UBE2D4-209ENST00000454428 ZNF467Q7Z7K2 595 aaPredicted RBP20.74■□□□□ 0.91
UBE2D4-209ENST00000454428 FAM122AQ96E09 287 aa20.74■□□□□ 0.91
UBE2D4-209ENST00000454428 NUP88Q99567 741 aaPredicted RBP20.74■□□□□ 0.91
UBE2D4-209ENST00000454428 KANSL2Q9H9L4 492 aa20.74■□□□□ 0.91
UBE2D4-209ENST00000454428 IL23AQ9NPF7 189 aa20.74■□□□□ 0.91
UBE2D4-209ENST00000454428 ATP8A2Q9NTI2 1148 aa20.74■□□□□ 0.91
UBE2D4-209ENST00000454428 MBD4O95243 580 aa20.73■□□□□ 0.91
UBE2D4-209ENST00000454428 CHGBP05060 677 aa20.73■□□□□ 0.91
UBE2D4-209ENST00000454428 CCDC144BQ3MJ40 725 aa20.73■□□□□ 0.91
UBE2D4-209ENST00000454428 SNRNP48Q6IEG0 339 aaKnown RBP20.73■□□□□ 0.91
UBE2D4-209ENST00000454428 PCSK9Q8NBP7 692 aaKnown RBP20.73■□□□□ 0.91
UBE2D4-209ENST00000454428 TEX13BQ9BXU2 312 aa20.73■□□□□ 0.91
UBE2D4-209ENST00000454428 KATNBL1Q9H079 304 aa20.73■□□□□ 0.91
UBE2D4-209ENST00000454428 GOPCQ9HD26 462 aa20.73■□□□□ 0.91
UBE2D4-209ENST00000454428 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.73■□□□□ 0.91
UBE2D4-209ENST00000454428 MSRAQ9UJ68 235 aa20.73■□□□□ 0.91
UBE2D4-209ENST00000454428 UMODL1Q5DID0 1318 aa20.73■□□□□ 0.91
UBE2D4-209ENST00000454428 USP17L12C9JPN9 530 aa20.72■□□□□ 0.91
UBE2D4-209ENST00000454428 USP17L21D6R901 530 aa20.72■□□□□ 0.91
UBE2D4-209ENST00000454428 NKX3-2P78367 333 aa20.72■□□□□ 0.91
UBE2D4-209ENST00000454428 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.72■□□□□ 0.91
UBE2D4-209ENST00000454428 VWCEQ96DN2 955 aa20.72■□□□□ 0.91
UBE2D4-209ENST00000454428 DNAJC2Q99543 621 aaKnown RBP20.72■□□□□ 0.91
UBE2D4-209ENST00000454428 SLF1Q9BQI6 1058 aa20.72■□□□□ 0.91
UBE2D4-209ENST00000454428 ADD2P35612 726 aa20.71■□□□□ 0.91
UBE2D4-209ENST00000454428 TFF2Q03403 129 aa20.71■□□□□ 0.91
UBE2D4-209ENST00000454428 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.71■□□□□ 0.91
UBE2D4-209ENST00000454428 ERC1Q8IUD2 1116 aa20.71■□□□□ 0.91
UBE2D4-209ENST00000454428 SLC43A3Q8NBI5 491 aa20.71■□□□□ 0.91
UBE2D4-209ENST00000454428 RHPN1Q8TCX5 695 aa20.71■□□□□ 0.91
UBE2D4-209ENST00000454428 DDX11Q96FC9 970 aa20.71■□□□□ 0.91
UBE2D4-209ENST00000454428 ASTN1O14525 1302 aa20.71■□□□□ 0.91
UBE2D4-209ENST00000454428 ZBED9Q6R2W3 1325 aa20.71■□□□□ 0.91
UBE2D4-209ENST00000454428 ATP2A1O14983 1001 aa20.7■□□□□ 0.9
UBE2D4-209ENST00000454428 RAD21O60216 631 aa20.7■□□□□ 0.9
UBE2D4-209ENST00000454428 HOXD11P31277 338 aaPredicted RBP20.7■□□□□ 0.9
UBE2D4-209ENST00000454428 RABGGTBP53611 331 aa20.7■□□□□ 0.9
UBE2D4-209ENST00000454428 GNASQ5JWF2 1037 aa20.7■□□□□ 0.9
UBE2D4-209ENST00000454428 ITPRIPQ8IWB1 547 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms