RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 BTG3Q14201 252 aaPredicted RBP5.57□□□□□ -1.52
EPHA3-202ENST00000452448 ARMC4Q5T2S8 1044 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 THOC7Q6I9Y2 204 aaKnown RBP5.57□□□□□ -1.52
EPHA3-202ENST00000452448 CCDC144CPQ8IYA2 1237 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 ESX1Q8N693 406 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 EIF3CQ99613 913 aaKnown RBP5.57□□□□□ -1.52
EPHA3-202ENST00000452448 PARD6BQ9BYG5 372 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 FAM126AQ9BYI3 521 aaPredicted RBP5.57□□□□□ -1.52
EPHA3-202ENST00000452448 ENAMQ9NRM1 1142 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 HOMER2Q9NSB8 354 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 HOMER3Q9NSC5 361 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 FANCLQ9NW38 375 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 TUBA8Q9NY65 449 aaPredicted RBP5.57□□□□□ -1.52
EPHA3-202ENST00000452448 ARHGEF40Q8TER5 1519 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 KDRP35968 1356 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 KTN1Q86UP2 1357 aaKnown RBP5.57□□□□□ -1.52
EPHA3-202ENST00000452448 ST18O60284 1047 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 PRMT3O60678 531 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 CAVIN2O95810 425 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 SLC4A1P02730 911 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 HNRNPCP07910 306 aaKnown RBP eCLIP5.57□□□□□ -1.52
EPHA3-202ENST00000452448 HCLS1P14317 486 aaPredicted RBP5.57□□□□□ -1.52
EPHA3-202ENST00000452448 CDKN1CP49918 316 aaPredicted RBP5.57□□□□□ -1.52
EPHA3-202ENST00000452448 TUBA1BP68363 451 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 CUL4BQ13620 913 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 PKN2Q16513 984 aaKnown RBP5.57□□□□□ -1.52
EPHA3-202ENST00000452448 TUBA1AQ71U36 451 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 CCDC150Q8NCX0 1101 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 C7orf57Q8NEG2 295 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 ACMSDQ8TDX5 336 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 HVCN1Q96D96 273 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 SERINC2Q96SA4 455 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 ALG1Q9BT22 464 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 ZBED2Q9BTP6 218 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 CARD8Q9Y2G2 431 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 PRKAB1Q9Y478 270 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 TRIM17Q9Y577 477 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 RIMS1Q86UR5 1692 aaKnown RBP5.57□□□□□ -1.52
EPHA3-202ENST00000452448 ZCCHC11Q5TAX3 1644 aaKnown RBP5.57□□□□□ -1.52
EPHA3-202ENST00000452448 ABCC5O15440 1437 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 MBD5Q9P267 1494 aa5.57□□□□□ -1.52
EPHA3-202ENST00000452448 USP17L3A6NCW0 530 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 USP17L4A6NCW7 530 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 FAM205CA6NFA0 338 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 TMEM221A6NGB7 291 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 GOLGA6L10A6NI86 522 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 LRRC72A6NJI9 287 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 A6NJY4 79 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 M0QX08 132 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 KLHL41O60662 606 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 PCNAP12004 261 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 ATF7P17544 494 aaPredicted RBP5.56□□□□□ -1.52
EPHA3-202ENST00000452448 TUFMP49411 452 aaKnown RBP5.56□□□□□ -1.52
EPHA3-202ENST00000452448 MXI1P50539 228 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 CCT8P50990 548 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 MRPL12P52815 198 aaKnown RBP5.56□□□□□ -1.52
EPHA3-202ENST00000452448 AP2B1P63010 937 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 GRM1Q13255 1194 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 SMC1AQ14683 1233 aaKnown RBP5.56□□□□□ -1.52
EPHA3-202ENST00000452448 SUZ12Q15022 739 aaKnown RBP5.56□□□□□ -1.52
EPHA3-202ENST00000452448 DOK7Q18PE1 504 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 BOLA3Q53S33 107 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 TTC39AQ5SRH9 613 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 RSBN1LQ6PCB5 846 aaPredicted RBP5.56□□□□□ -1.52
EPHA3-202ENST00000452448 USP17L2Q6R6M4 530 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 USP17L1Q7RTZ2 530 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 JAMLQ86YT9 394 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 RGL4Q8IZJ4 473 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 BRSK1Q8TDC3 778 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 NUP133Q8WUM0 1156 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 STON2Q8WXE9 905 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 RSAD2Q8WXG1 361 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 ARHGEF2Q92974 986 aaKnown RBP5.56□□□□□ -1.52
EPHA3-202ENST00000452448 PPP1R14BQ96C90 147 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 CLMNQ96JQ2 1002 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 ZMAT2Q96NC0 199 aaKnown RBP5.56□□□□□ -1.52
EPHA3-202ENST00000452448 ALPK1Q96QP1 1244 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 ZSCAN16Q9H4T2 348 aaPredicted RBP5.56□□□□□ -1.52
EPHA3-202ENST00000452448 LGR6Q9HBX8 967 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 METTL5Q9NRN9 209 aaKnown RBP5.56□□□□□ -1.52
EPHA3-202ENST00000452448 VTI1BQ9UEU0 232 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 TUBGCP4Q9UGJ1 667 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 ZNF510Q9Y2H8 683 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 KIF7Q2M1P5 1343 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 CFAP99D6REC4 459 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 KIF2AO00139 706 aaPredicted RBP5.56□□□□□ -1.52
EPHA3-202ENST00000452448 KIF3BO15066 747 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 P4HA2O15460 535 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 TSPAN6O43657 245 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 KATNA1O75449 491 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 ZFXP17010 805 aaPredicted RBP5.56□□□□□ -1.52
EPHA3-202ENST00000452448 PTPREP23469 700 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 SLC16A2P36021 539 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 PEX5P50542 639 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 NCBP1Q09161 790 aaKnown RBP5.56□□□□□ -1.52
EPHA3-202ENST00000452448 LAPTM5Q13571 262 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 VPS72Q15906 364 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 GPR162Q16538 588 aa5.56□□□□□ -1.52
EPHA3-202ENST00000452448 ZC3H12BQ5HYM0 836 aaKnown RBP5.56□□□□□ -1.52
EPHA3-202ENST00000452448 NCCRP1Q6ZVX7 275 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms