RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 PTH1RQ03431 593 aa16.62■□□□□ 0.25
RTFDC1-204ENST00000449062 RRP12Q5JTH9 1297 aaKnown RBP16.62■□□□□ 0.25
RTFDC1-204ENST00000449062 OLFML2BQ68BL8 750 aa16.62■□□□□ 0.25
RTFDC1-204ENST00000449062 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.62■□□□□ 0.25
RTFDC1-204ENST00000449062 CENPQQ7L2Z9 268 aaPredicted RBP16.62■□□□□ 0.25
RTFDC1-204ENST00000449062 RASGRP2Q7LDG7 609 aa16.62■□□□□ 0.25
RTFDC1-204ENST00000449062 SKAP1Q86WV1 359 aa16.62■□□□□ 0.25
RTFDC1-204ENST00000449062 TRPV1Q8NER1 839 aa16.62■□□□□ 0.25
RTFDC1-204ENST00000449062 ANKS1AQ92625 1134 aa16.62■□□□□ 0.25
RTFDC1-204ENST00000449062 KIFC2Q96AC6 838 aa16.62■□□□□ 0.25
RTFDC1-204ENST00000449062 TEX13BQ9BXU2 312 aa16.62■□□□□ 0.25
RTFDC1-204ENST00000449062 RNF41Q9H4P4 317 aaPredicted RBP16.62■□□□□ 0.25
RTFDC1-204ENST00000449062 CTNNA3Q9UI47 895 aa16.62■□□□□ 0.25
RTFDC1-204ENST00000449062 NEDD4P46934 1319 aa16.62■□□□□ 0.25
RTFDC1-204ENST00000449062 ZBED4O75132 1171 aa16.61■□□□□ 0.25
RTFDC1-204ENST00000449062 TFRCP02786 760 aaKnown RBP16.61■□□□□ 0.25
RTFDC1-204ENST00000449062 FCER1AP12319 257 aa16.61■□□□□ 0.25
RTFDC1-204ENST00000449062 CCND3P30281 292 aaPredicted RBP16.61■□□□□ 0.25
RTFDC1-204ENST00000449062 SLC1A4P43007 532 aa16.61■□□□□ 0.25
RTFDC1-204ENST00000449062 NT5C2P49902 561 aa16.61■□□□□ 0.25
RTFDC1-204ENST00000449062 ZNF792Q3KQV3 632 aa16.61■□□□□ 0.25
RTFDC1-204ENST00000449062 BTNL9Q6UXG8 535 aa16.61■□□□□ 0.25
RTFDC1-204ENST00000449062 DPP9Q86TI2 863 aa16.61■□□□□ 0.25
RTFDC1-204ENST00000449062 CHURC1Q8WUH1 139 aa16.61■□□□□ 0.25
RTFDC1-204ENST00000449062 CWC22Q9HCG8 908 aaKnown RBP16.61■□□□□ 0.25
RTFDC1-204ENST00000449062 TOMM22Q9NS69 142 aa16.61■□□□□ 0.25
RTFDC1-204ENST00000449062 OGDHLQ9ULD0 1010 aa16.61■□□□□ 0.25
RTFDC1-204ENST00000449062 ZNF536O15090 1300 aa16.61■□□□□ 0.25
RTFDC1-204ENST00000449062 RAD50Q92878 1312 aa16.61■□□□□ 0.25
RTFDC1-204ENST00000449062 MYH4Q9Y623 1939 aa16.6■□□□□ 0.25
RTFDC1-204ENST00000449062 SNHG28P0DPA3 235 aa16.6■□□□□ 0.25
RTFDC1-204ENST00000449062 FDX1P10109 184 aa16.6■□□□□ 0.25
RTFDC1-204ENST00000449062 CYP2C19P33261 490 aa16.6■□□□□ 0.25
RTFDC1-204ENST00000449062 COPB2P35606 906 aa16.6■□□□□ 0.25
RTFDC1-204ENST00000449062 OAZ1P54368 228 aa16.6■□□□□ 0.25
RTFDC1-204ENST00000449062 MFSD14CQ5VZR4 134 aa16.6■□□□□ 0.25
RTFDC1-204ENST00000449062 KCTD1Q719H9 257 aa16.6■□□□□ 0.25
RTFDC1-204ENST00000449062 FAM160B2Q86V87 743 aa16.6■□□□□ 0.25
RTFDC1-204ENST00000449062 DGKHQ86XP1 1220 aa16.6■□□□□ 0.25
RTFDC1-204ENST00000449062 ESR2Q92731 530 aa16.6■□□□□ 0.25
RTFDC1-204ENST00000449062 RAVER2Q9HCJ3 691 aaKnown RBP16.6■□□□□ 0.25
RTFDC1-204ENST00000449062 ZSWIM5Q9P217 1185 aa16.6■□□□□ 0.25
RTFDC1-204ENST00000449062 DNAJC25-GNG10A0A024R161 153 aa16.59■□□□□ 0.25
RTFDC1-204ENST00000449062 KDM4AO75164 1064 aa16.59■□□□□ 0.25
RTFDC1-204ENST00000449062 PGK2P07205 417 aa16.59■□□□□ 0.25
RTFDC1-204ENST00000449062 STAT2P52630 851 aa16.59■□□□□ 0.25
RTFDC1-204ENST00000449062 IMMTQ16891 758 aaKnown RBP16.59■□□□□ 0.25
RTFDC1-204ENST00000449062 SNRNP48Q6IEG0 339 aaKnown RBP16.59■□□□□ 0.25
RTFDC1-204ENST00000449062 TTBK2Q6IQ55 1244 aa16.59■□□□□ 0.25
RTFDC1-204ENST00000449062 CPXCR1Q8N123 301 aa16.59■□□□□ 0.25
RTFDC1-204ENST00000449062 DCAF4Q8WV16 495 aa16.59■□□□□ 0.25
RTFDC1-204ENST00000449062 RUFY2Q8WXA3 655 aa16.59■□□□□ 0.25
RTFDC1-204ENST00000449062 CHMP4CQ96CF2 233 aa16.59■□□□□ 0.25
RTFDC1-204ENST00000449062 MAML3Q96JK9 1138 aa16.59■□□□□ 0.25
RTFDC1-204ENST00000449062 DIS3Q9Y2L1 958 aaKnown RBP16.59■□□□□ 0.25
RTFDC1-204ENST00000449062 FARP2O94887 1054 aaPredicted RBP16.58■□□□□ 0.24
RTFDC1-204ENST00000449062 CYBAP13498 195 aa16.58■□□□□ 0.24
RTFDC1-204ENST00000449062 PRPF38BQ5VTL8 546 aaKnown RBP16.58■□□□□ 0.24
RTFDC1-204ENST00000449062 ANKLE1Q8NAG6 615 aa16.58■□□□□ 0.24
RTFDC1-204ENST00000449062 MAP4K1Q92918 833 aa16.58■□□□□ 0.24
RTFDC1-204ENST00000449062 MMP19Q99542 508 aa16.58■□□□□ 0.24
RTFDC1-204ENST00000449062 PRR12Q9ULL5 1215 aa16.58■□□□□ 0.24
RTFDC1-204ENST00000449062 TAF6LQ9Y6J9 622 aa16.58■□□□□ 0.24
RTFDC1-204ENST00000449062 COL11A1P12107 1806 aaPredicted RBP16.57■□□□□ 0.24
RTFDC1-204ENST00000449062 B4E1Z4 1266 aa16.57■□□□□ 0.24
RTFDC1-204ENST00000449062 CYP21A2P08686 494 aa16.57■□□□□ 0.24
RTFDC1-204ENST00000449062 PDHBP11177 359 aa16.57■□□□□ 0.24
RTFDC1-204ENST00000449062 KCTD2Q14681 263 aa16.57■□□□□ 0.24
RTFDC1-204ENST00000449062 CHST13Q8NET6 341 aa16.57■□□□□ 0.24
RTFDC1-204ENST00000449062 DIS3LQ8TF46 1054 aaKnown RBP16.57■□□□□ 0.24
RTFDC1-204ENST00000449062 PAWRQ96IZ0 340 aaKnown RBP16.57■□□□□ 0.24
RTFDC1-204ENST00000449062 AGBL1Q96MI9 1066 aa16.57■□□□□ 0.24
RTFDC1-204ENST00000449062 ZKSCAN3Q9BRR0 538 aa16.57■□□□□ 0.24
RTFDC1-204ENST00000449062 SLC5A4Q9NY91 659 aa16.57■□□□□ 0.24
RTFDC1-204ENST00000449062 ZNF236Q9UL36 1845 aa16.56■□□□□ 0.24
RTFDC1-204ENST00000449062 ZNF543Q08ER8 600 aa16.56■□□□□ 0.24
RTFDC1-204ENST00000449062 CCDC178Q5BJE1 867 aa16.56■□□□□ 0.24
RTFDC1-204ENST00000449062 BMP2KLQ5H9B9 411 aa16.56■□□□□ 0.24
RTFDC1-204ENST00000449062 PRAMEF19Q5SWL8 479 aa16.56■□□□□ 0.24
RTFDC1-204ENST00000449062 ENAHQ8N8S7 591 aaPredicted RBP16.56■□□□□ 0.24
RTFDC1-204ENST00000449062 FGD4Q96M96 766 aa16.56■□□□□ 0.24
RTFDC1-204ENST00000449062 ZSCAN10Q96SZ4 725 aaPredicted RBP16.56■□□□□ 0.24
RTFDC1-204ENST00000449062 ZNFX1Q9P2E3 1918 aaKnown RBP16.56■□□□□ 0.24
RTFDC1-204ENST00000449062 COL6A1P12109 1028 aa16.55■□□□□ 0.24
RTFDC1-204ENST00000449062 SLC16A2P36021 539 aa16.55■□□□□ 0.24
RTFDC1-204ENST00000449062 SNAP25P60880 206 aa16.55■□□□□ 0.24
RTFDC1-204ENST00000449062 SEC23AQ15436 765 aa16.55■□□□□ 0.24
RTFDC1-204ENST00000449062 CYB5R4Q7L1T6 521 aa16.55■□□□□ 0.24
RTFDC1-204ENST00000449062 TINF2Q9BSI4 451 aa16.55■□□□□ 0.24
RTFDC1-204ENST00000449062 KRT23Q9C075 422 aa16.55■□□□□ 0.24
RTFDC1-204ENST00000449062 RANBP17Q9H2T7 1088 aaKnown RBP16.55■□□□□ 0.24
RTFDC1-204ENST00000449062 CNNM2Q9H8M5 875 aa16.55■□□□□ 0.24
RTFDC1-204ENST00000449062 FBXO40Q9UH90 709 aa16.55■□□□□ 0.24
RTFDC1-204ENST00000449062 U3KPZ7 1027 aaPredicted RBP16.55■□□□□ 0.24
RTFDC1-204ENST00000449062 RANBP2P49792 3224 aaKnown RBP16.55■□□□□ 0.24
RTFDC1-204ENST00000449062 MAMDC4Q6UXC1 1216 aa16.54■□□□□ 0.24
RTFDC1-204ENST00000449062 STOX1Q6ZVD7 989 aa16.54■□□□□ 0.24
RTFDC1-204ENST00000449062 IQCA1Q86XH1 822 aa16.54■□□□□ 0.24
RTFDC1-204ENST00000449062 LSG1Q9H089 658 aaKnown RBP16.54■□□□□ 0.24
RTFDC1-204ENST00000449062 GPCPD1Q9NPB8 672 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms