RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 PRAMEF1O95521 474 aa6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 SRFP11831 508 aa6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 PPP2R2AP63151 447 aa6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 GRB10Q13322 594 aa6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 CLEC16AQ2KHT3 1053 aa6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 PLEKHG4Q58EX7 1191 aa6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 SYNPOQ8N3V7 929 aa6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 DAGLBQ8NCG7 672 aa6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 TRIT1Q9H3H1 467 aaKnown RBP6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 NOL6Q9H6R4 1146 aaKnown RBP6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 GPATCH2Q9NW75 528 aa6.36□□□□□ -1.39
HMGB1P16-201ENST00000447155 TRAV20A0A0B4J274 112 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 CCDC163A0A0D9SF12 145 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 RBAK-RBAKDNI3L0D1 243 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 CAPNS1P04632 268 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 GSNP06396 782 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 ITIH2P19823 946 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 CLCN7P51798 805 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 PPP2R5DQ14738 602 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 NKPD1Q17RQ9 610 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 C16orf86Q6ZW13 317 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 ZDHHC13Q8IUH4 622 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 FAM181AQ8N9Y4 354 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 LGR4Q9BXB1 951 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 HDAC8Q9BY41 377 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 DUSP15Q9H1R2 295 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 LRRC4CQ9HCJ2 640 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 ST14Q9Y5Y6 855 aa6.35□□□□□ -1.39
HMGB1P16-201ENST00000447155 SHISA3A0PJX4 238 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 CYP26A1O43174 497 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 DYRK3O43781 588 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 KCNH1O95259 989 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 CEACAM5P06731 702 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 FGFR1P11362 822 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 CWF19L1Q69YN2 538 aaKnown RBP6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 SCUBE1Q8IWY4 988 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 SPACA3Q8IXA5 215 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 ZNF655Q8N720 491 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 ZDHHC15Q96MV8 337 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 IPO9Q96P70 1041 aaKnown RBP6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 CDC6Q99741 560 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 PIM2Q9P1W9 311 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 SNX11Q9Y5W9 270 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 U3KQE9 123 aa6.34□□□□□ -1.39
HMGB1P16-201ENST00000447155 SBNO2Q9Y2G9 1366 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 H0Y8X5 98 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 TBX1O43435 398 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 IGHA1P01876 353 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 AMPD2Q01433 879 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 IFI16Q16666 785 aaKnown RBP6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 CDKAL1Q5VV42 579 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 FOXB2Q5VYV0 432 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 GTF2IRD2BQ6EKJ0 949 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 THAP5Q7Z6K1 395 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 KIAA0907Q7Z7F0 614 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 GTF2IRD2Q86UP8 949 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 TSPYL5Q86VY4 417 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 NETO1Q8TDF5 533 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 KISS1RQ969F8 398 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 CCDC140Q96MF4 163 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 DHRS4Q9BTZ2 278 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 SLKQ9H2G2 1235 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 NKX2-4Q9H2Z4 354 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 MINPP1Q9UNW1 487 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 PLAGL2Q9UPG8 496 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 MYO15BQ96JP2 1530 aa6.33□□□□□ -1.4
HMGB1P16-201ENST00000447155 TMEM265A0A087WTH1 108 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 TRBV23-1A0A0A0MS06 115 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 MEIS1O00470 390 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 ASMTLO95671 621 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 PABPC1P11940 636 aaKnown RBP6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 FOSL1P15407 271 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 HOXC12P31275 282 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 CTSKP43235 329 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 POU4F1Q01851 419 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 TCEA2Q15560 299 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 TAF7LQ5H9L4 462 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 FAM209AQ5JX71 171 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 ZNF662Q6ZS27 426 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 BTN2A2Q8WVV5 523 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 TCTN2Q96GX1 697 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 EXOC2Q96KP1 924 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 HSPA12BQ96MM6 686 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 FEZ1Q99689 392 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 CYP26B1Q9NR63 512 aa6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.32□□□□□ -1.4
HMGB1P16-201ENST00000447155 DNAJC25-GNG10A0A024R161 153 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 ANKRD62A6NC57 917 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 PRR19A6NJB7 356 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 PRODHO43272 600 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 TPP2P29144 1249 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 L1CAMP32004 1257 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 BMP8BP34820 402 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 GRIA2P42262 883 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 NOP2P46087 812 aaKnown RBP6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 YOD1Q5VVQ6 348 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 CRTC3Q6UUV7 619 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 NSMFQ6X4W1 530 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 PLD6Q8N2A8 252 aaKnown RBP6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 OSBP2Q969R2 916 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms