RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 TRPV1Q8NER1 839 aa18.46■□□□□ 0.55
HMGB2-203ENST00000446922 CHURC1Q8WUH1 139 aa18.46■□□□□ 0.55
HMGB2-203ENST00000446922 LNPKQ9C0E8 428 aa18.46■□□□□ 0.55
HMGB2-203ENST00000446922 SLC38A10Q9HBR0 1119 aa18.46■□□□□ 0.55
HMGB2-203ENST00000446922 RBM27Q9P2N5 1060 aaKnown RBP18.46■□□□□ 0.55
HMGB2-203ENST00000446922 CTDP1Q9Y5B0 961 aaPredicted RBP18.46■□□□□ 0.55
HMGB2-203ENST00000446922 PFASO15067 1338 aa18.46■□□□□ 0.55
HMGB2-203ENST00000446922 TSPY2A6NKD2 308 aa18.45■□□□□ 0.54
HMGB2-203ENST00000446922 DNM1LO00429 736 aa18.45■□□□□ 0.54
HMGB2-203ENST00000446922 BMP3P12645 472 aa18.45■□□□□ 0.54
HMGB2-203ENST00000446922 NOVP48745 357 aa18.45■□□□□ 0.54
HMGB2-203ENST00000446922 NT5C2P49902 561 aa18.45■□□□□ 0.54
HMGB2-203ENST00000446922 SLFN13Q68D06 897 aa18.45■□□□□ 0.54
HMGB2-203ENST00000446922 CCDC129Q6ZRS4 1044 aa18.45■□□□□ 0.54
HMGB2-203ENST00000446922 FAM160B2Q86V87 743 aa18.45■□□□□ 0.54
HMGB2-203ENST00000446922 NUP88Q99567 741 aaPredicted RBP18.45■□□□□ 0.54
HMGB2-203ENST00000446922 FBXO40Q9UH90 709 aa18.45■□□□□ 0.54
HMGB2-203ENST00000446922 CEP290O15078 2479 aa18.45■□□□□ 0.54
HMGB2-203ENST00000446922 FGAP02671 866 aa18.44■□□□□ 0.54
HMGB2-203ENST00000446922 FAM47AQ5JRC9 791 aa18.44■□□□□ 0.54
HMGB2-203ENST00000446922 SNRNP48Q6IEG0 339 aaKnown RBP18.44■□□□□ 0.54
HMGB2-203ENST00000446922 CHST13Q8NET6 341 aa18.44■□□□□ 0.54
HMGB2-203ENST00000446922 TINF2Q9BSI4 451 aa18.44■□□□□ 0.54
HMGB2-203ENST00000446922 MYH4Q9Y623 1939 aa18.44■□□□□ 0.54
HMGB2-203ENST00000446922 COL11A1P12107 1806 aaPredicted RBP18.44■□□□□ 0.54
HMGB2-203ENST00000446922 ZNFX1Q9P2E3 1918 aaKnown RBP18.43■□□□□ 0.54
HMGB2-203ENST00000446922 TRIM6-TRIM34B2RNG4 842 aa18.43■□□□□ 0.54
HMGB2-203ENST00000446922 IGHDP01880 384 aa18.43■□□□□ 0.54
HMGB2-203ENST00000446922 STAT2P52630 851 aa18.43■□□□□ 0.54
HMGB2-203ENST00000446922 VPS53Q5VIR6 699 aa18.43■□□□□ 0.54
HMGB2-203ENST00000446922 ZNF467Q7Z7K2 595 aaPredicted RBP18.43■□□□□ 0.54
HMGB2-203ENST00000446922 PLEKHM2Q8IWE5 1019 aa18.43■□□□□ 0.54
HMGB2-203ENST00000446922 KIFC2Q96AC6 838 aa18.43■□□□□ 0.54
HMGB2-203ENST00000446922 GDF15Q99988 308 aa18.43■□□□□ 0.54
HMGB2-203ENST00000446922 TCP11L1Q9NUJ3 509 aa18.43■□□□□ 0.54
HMGB2-203ENST00000446922 DNAJC25-GNG10A0A024R161 153 aa18.42■□□□□ 0.54
HMGB2-203ENST00000446922 HIP1O00291 1037 aa18.42■□□□□ 0.54
HMGB2-203ENST00000446922 HSPD1P10809 573 aaKnown RBP18.42■□□□□ 0.54
HMGB2-203ENST00000446922 CTDSPL2Q05D32 466 aa18.42■□□□□ 0.54
HMGB2-203ENST00000446922 RCSD1Q6JBY9 416 aa18.42■□□□□ 0.54
HMGB2-203ENST00000446922 MAMDC4Q6UXC1 1216 aa18.42■□□□□ 0.54
HMGB2-203ENST00000446922 C7orf61Q8IZ16 206 aa18.42■□□□□ 0.54
HMGB2-203ENST00000446922 EXOC6Q8TAG9 804 aa18.42■□□□□ 0.54
HMGB2-203ENST00000446922 STAG1Q8WVM7 1258 aa18.42■□□□□ 0.54
HMGB2-203ENST00000446922 RILPL2Q969X0 211 aa18.42■□□□□ 0.54
HMGB2-203ENST00000446922 DDX11Q96FC9 970 aa18.42■□□□□ 0.54
HMGB2-203ENST00000446922 FAM227BQ96M60 508 aa18.42■□□□□ 0.54
HMGB2-203ENST00000446922 IL17RBQ9NRM6 502 aa18.42■□□□□ 0.54
HMGB2-203ENST00000446922 ALPK3Q96L96 1907 aa18.41■□□□□ 0.54
HMGB2-203ENST00000446922 A0A0D9SFI3 127 aa18.41■□□□□ 0.54
HMGB2-203ENST00000446922 TMEM232C9JQI7 657 aa18.41■□□□□ 0.54
HMGB2-203ENST00000446922 SDSP20132 328 aa18.41■□□□□ 0.54
HMGB2-203ENST00000446922 SLC1A4P43007 532 aa18.41■□□□□ 0.54
HMGB2-203ENST00000446922 TKFCQ3LXA3 575 aa18.41■□□□□ 0.54
HMGB2-203ENST00000446922 B4GALNT3Q6L9W6 998 aa18.41■□□□□ 0.54
HMGB2-203ENST00000446922 LRRC47Q8N1G4 583 aaKnown RBP18.41■□□□□ 0.54
HMGB2-203ENST00000446922 TTC14Q96N46 770 aa18.41■□□□□ 0.54
HMGB2-203ENST00000446922 SENP6Q9GZR1 1112 aaPredicted RBP18.41■□□□□ 0.54
HMGB2-203ENST00000446922 STX8Q9UNK0 236 aa18.41■□□□□ 0.54
HMGB2-203ENST00000446922 DNAH12Q6ZR08 3092 aa18.41■□□□□ 0.54
HMGB2-203ENST00000446922 CCDC171Q6TFL3 1326 aa18.41■□□□□ 0.54
HMGB2-203ENST00000446922 SYNGAP1Q96PV0 1343 aa18.41■□□□□ 0.54
HMGB2-203ENST00000446922 RANBP2P49792 3224 aaKnown RBP18.41■□□□□ 0.54
HMGB2-203ENST00000446922 FRMPD3Q5JV73 1810 aa18.4■□□□□ 0.54
HMGB2-203ENST00000446922 KBTBD13C9JR72 458 aa18.4■□□□□ 0.54
HMGB2-203ENST00000446922 RANBP6O60518 1105 aaKnown RBP18.4■□□□□ 0.54
HMGB2-203ENST00000446922 PGK2P07205 417 aa18.4■□□□□ 0.54
HMGB2-203ENST00000446922 NMIQ13287 307 aaPredicted RBP18.4■□□□□ 0.54
HMGB2-203ENST00000446922 LRRC26Q2I0M4 334 aa18.4■□□□□ 0.54
HMGB2-203ENST00000446922 CPXCR1Q8N123 301 aa18.4■□□□□ 0.54
HMGB2-203ENST00000446922 RIPK3Q9Y572 518 aa18.4■□□□□ 0.54
HMGB2-203ENST00000446922 RARBP10826 455 aa18.39■□□□□ 0.53
HMGB2-203ENST00000446922 PRAMEF19Q5SWL8 479 aa18.39■□□□□ 0.53
HMGB2-203ENST00000446922 DCAF4Q8WV16 495 aa18.39■□□□□ 0.53
HMGB2-203ENST00000446922 RNF41Q9H4P4 317 aaPredicted RBP18.39■□□□□ 0.53
HMGB2-203ENST00000446922 RAVER2Q9HCJ3 691 aaKnown RBP18.39■□□□□ 0.53
HMGB2-203ENST00000446922 CNPY2Q9Y2B0 182 aa18.39■□□□□ 0.53
HMGB2-203ENST00000446922 ZNF865P0CJ78 1059 aaPredicted RBP18.38■□□□□ 0.53
HMGB2-203ENST00000446922 AKR1A1P14550 325 aa18.38■□□□□ 0.53
HMGB2-203ENST00000446922 MCCP23508 829 aa18.38■□□□□ 0.53
HMGB2-203ENST00000446922 C1orf53Q5VUE5 145 aa18.38■□□□□ 0.53
HMGB2-203ENST00000446922 ANKRD35Q8N283 1001 aa18.38■□□□□ 0.53
HMGB2-203ENST00000446922 INCENPQ9NQS7 918 aa18.38■□□□□ 0.53
HMGB2-203ENST00000446922 TOP1P11387 765 aaKnown RBP18.37■□□□□ 0.53
HMGB2-203ENST00000446922 LRRC41Q15345 812 aa18.37■□□□□ 0.53
HMGB2-203ENST00000446922 AKNAD1Q5T1N1 836 aa18.37■□□□□ 0.53
HMGB2-203ENST00000446922 GJC2Q5T442 439 aaPredicted RBP18.37■□□□□ 0.53
HMGB2-203ENST00000446922 BTNL9Q6UXG8 535 aa18.37■□□□□ 0.53
HMGB2-203ENST00000446922 MFSD6Q6ZSS7 791 aa18.37■□□□□ 0.53
HMGB2-203ENST00000446922 RNF180Q86T96 592 aa18.37■□□□□ 0.53
HMGB2-203ENST00000446922 ZNF589Q86UQ0 364 aaPredicted RBP18.37■□□□□ 0.53
HMGB2-203ENST00000446922 PNMA2Q9UL42 364 aa18.37■□□□□ 0.53
HMGB2-203ENST00000446922 FAM184BQ9ULE4 1060 aa18.37■□□□□ 0.53
HMGB2-203ENST00000446922 ZMYND8Q9ULU4 1186 aaPredicted RBP18.37■□□□□ 0.53
HMGB2-203ENST00000446922 SUPT16HQ9Y5B9 1047 aaKnown RBP18.37■□□□□ 0.53
HMGB2-203ENST00000446922 TACC3Q9Y6A5 838 aa18.37■□□□□ 0.53
HMGB2-203ENST00000446922 PLXNA1Q9UIW2 1896 aa18.37■□□□□ 0.53
HMGB2-203ENST00000446922 IKQ13123 557 aaPredicted RBP18.36■□□□□ 0.53
HMGB2-203ENST00000446922 CCDC178Q5BJE1 867 aa18.36■□□□□ 0.53
HMGB2-203ENST00000446922 SLC39A5Q6ZMH5 540 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms