RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 TCTN2Q96GX1 697 aa6.92□□□□□ -1.3
HMGB3P6-201ENST00000444896 RCC1LQ96I51 464 aaKnown RBP6.92□□□□□ -1.3
HMGB3P6-201ENST00000444896 GBP3Q9H0R5 595 aa6.92□□□□□ -1.3
HMGB3P6-201ENST00000444896 ASCC2Q9H1I8 757 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P6-201ENST00000444896 NOL6Q9H6R4 1146 aaKnown RBP6.92□□□□□ -1.3
HMGB3P6-201ENST00000444896 CCDC39Q9UFE4 941 aa6.92□□□□□ -1.3
HMGB3P6-201ENST00000444896 DIS3Q9Y2L1 958 aaKnown RBP6.92□□□□□ -1.3
HMGB3P6-201ENST00000444896 MEIS1O00470 390 aa6.91□□□□□ -1.3
HMGB3P6-201ENST00000444896 PPM1BO75688 479 aa6.91□□□□□ -1.3
HMGB3P6-201ENST00000444896 WNT11O96014 354 aa6.91□□□□□ -1.3
HMGB3P6-201ENST00000444896 CD8BP10966 210 aa6.91□□□□□ -1.3
HMGB3P6-201ENST00000444896 NFE2L2Q16236 605 aa6.91□□□□□ -1.3
HMGB3P6-201ENST00000444896 SV2CQ496J9 727 aa6.91□□□□□ -1.3
HMGB3P6-201ENST00000444896 ZNF574Q6ZN55 896 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P6-201ENST00000444896 ZNF655Q8N720 491 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P6-201ENST00000444896 ASB11Q8WXH4 323 aa6.91□□□□□ -1.3
HMGB3P6-201ENST00000444896 MISP3Q96FF7 219 aa6.91□□□□□ -1.3
HMGB3P6-201ENST00000444896 MRGPRX3Q96LB0 322 aa6.91□□□□□ -1.3
HMGB3P6-201ENST00000444896 EPN3Q9H201 632 aa6.91□□□□□ -1.3
HMGB3P6-201ENST00000444896 H0Y8X5 98 aa6.9□□□□□ -1.3
HMGB3P6-201ENST00000444896 NAT2P11245 290 aa6.9□□□□□ -1.3
HMGB3P6-201ENST00000444896 PPP2R5DQ14738 602 aa6.9□□□□□ -1.3
HMGB3P6-201ENST00000444896 LILRB2Q8N423 598 aa6.9□□□□□ -1.3
HMGB3P6-201ENST00000444896 LRRN4CLQ8ND94 238 aa6.9□□□□□ -1.3
HMGB3P6-201ENST00000444896 BVESQ8NE79 360 aa6.9□□□□□ -1.3
HMGB3P6-201ENST00000444896 FLCNQ8NFG4 579 aa6.9□□□□□ -1.3
HMGB3P6-201ENST00000444896 ZNF669Q96BR6 464 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P6-201ENST00000444896 DNAJC7Q99615 494 aa6.9□□□□□ -1.3
HMGB3P6-201ENST00000444896 CGGBP1Q9UFW8 167 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P6-201ENST00000444896 ZMYM5Q9UJ78 669 aa6.9□□□□□ -1.3
HMGB3P6-201ENST00000444896 AKT3Q9Y243 479 aa6.9□□□□□ -1.3
HMGB3P6-201ENST00000444896 SUGT1Q9Y2Z0 365 aa6.9□□□□□ -1.3
HMGB3P6-201ENST00000444896 EMC9Q9Y3B6 208 aa6.9□□□□□ -1.3
HMGB3P6-201ENST00000444896 A0A1W2PQU0 124 aa6.89□□□□□ -1.31
HMGB3P6-201ENST00000444896 TBX1O43435 398 aa6.89□□□□□ -1.31
HMGB3P6-201ENST00000444896 DIAPH1O60610 1272 aaKnown RBP6.89□□□□□ -1.31
HMGB3P6-201ENST00000444896 VAMP4O75379 141 aa6.89□□□□□ -1.31
HMGB3P6-201ENST00000444896 ITGAVP06756 1048 aa6.89□□□□□ -1.31
HMGB3P6-201ENST00000444896 CRTC3Q6UUV7 619 aa6.89□□□□□ -1.31
HMGB3P6-201ENST00000444896 TMPRSS7Q7RTY8 843 aa6.89□□□□□ -1.31
HMGB3P6-201ENST00000444896 VSIG10LQ86VR7 867 aa6.89□□□□□ -1.31
HMGB3P6-201ENST00000444896 CREG2Q8IUH2 290 aa6.89□□□□□ -1.31
HMGB3P6-201ENST00000444896 TP53INP2Q8IXH6 220 aa6.89□□□□□ -1.31
HMGB3P6-201ENST00000444896 STK11IPQ8N1F8 1099 aa6.89□□□□□ -1.31
HMGB3P6-201ENST00000444896 MCMBPQ9BTE3 642 aa6.89□□□□□ -1.31
HMGB3P6-201ENST00000444896 DSCC1Q9BVC3 393 aa6.89□□□□□ -1.31
HMGB3P6-201ENST00000444896 PFDN2Q9UHV9 154 aa6.89□□□□□ -1.31
HMGB3P6-201ENST00000444896 DUSP13Q9UII6 198 aa6.89□□□□□ -1.31
HMGB3P6-201ENST00000444896 SLC5A6Q9Y289 635 aa6.89□□□□□ -1.31
HMGB3P6-201ENST00000444896 PCDHA11Q9Y5I1 949 aa6.89□□□□□ -1.31
HMGB3P6-201ENST00000444896 GSNP06396 782 aa6.88□□□□□ -1.31
HMGB3P6-201ENST00000444896 BMP8BP34820 402 aa6.88□□□□□ -1.31
HMGB3P6-201ENST00000444896 MTERF2Q49AM1 385 aa6.88□□□□□ -1.31
HMGB3P6-201ENST00000444896 ZNF227Q86WZ6 799 aa6.88□□□□□ -1.31
HMGB3P6-201ENST00000444896 TRIM59Q8IWR1 403 aa6.88□□□□□ -1.31
HMGB3P6-201ENST00000444896 LINC00116Q8NCU8 138 aa6.88□□□□□ -1.31
HMGB3P6-201ENST00000444896 MRFAP1L1Q96HT8 127 aa6.88□□□□□ -1.31
HMGB3P6-201ENST00000444896 ZDHHC15Q96MV8 337 aa6.88□□□□□ -1.31
HMGB3P6-201ENST00000444896 FOXP3Q9BZS1 431 aa6.88□□□□□ -1.31
HMGB3P6-201ENST00000444896 ZNF281Q9Y2X9 895 aa6.88□□□□□ -1.31
HMGB3P6-201ENST00000444896 VAV1P15498 845 aa6.87□□□□□ -1.31
HMGB3P6-201ENST00000444896 IFRD2Q12894 506 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P6-201ENST00000444896 IKZF1Q13422 519 aa6.87□□□□□ -1.31
HMGB3P6-201ENST00000444896 JMYQ8N9B5 988 aa6.87□□□□□ -1.31
HMGB3P6-201ENST00000444896 PPP1R14AQ96A00 147 aa6.87□□□□□ -1.31
HMGB3P6-201ENST00000444896 SGSM3Q96HU1 749 aa6.87□□□□□ -1.31
HMGB3P6-201ENST00000444896 FCRL3Q96P31 734 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P6-201ENST00000444896 SPATA9Q9BWV2 254 aa6.87□□□□□ -1.31
HMGB3P6-201ENST00000444896 SLC12A9Q9BXP2 914 aa6.87□□□□□ -1.31
HMGB3P6-201ENST00000444896 CARS2Q9HA77 564 aaKnown RBP6.87□□□□□ -1.31
HMGB3P6-201ENST00000444896 PAK6Q9NQU5 681 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P6-201ENST00000444896 LMCD1Q9NZU5 365 aa6.87□□□□□ -1.31
HMGB3P6-201ENST00000444896 SF3B6Q9Y3B4 125 aaKnown RBP6.87□□□□□ -1.31
HMGB3P6-201ENST00000444896 KDM2BQ8NHM5 1336 aa6.86□□□□□ -1.31
HMGB3P6-201ENST00000444896 TMEM82A0PJX8 343 aa6.86□□□□□ -1.31
HMGB3P6-201ENST00000444896 ADCY3O60266 1144 aa6.86□□□□□ -1.31
HMGB3P6-201ENST00000444896 ZNF205O95201 554 aa6.86□□□□□ -1.31
HMGB3P6-201ENST00000444896 KCNH1O95259 989 aa6.86□□□□□ -1.31
HMGB3P6-201ENST00000444896 SYPP08247 313 aa6.86□□□□□ -1.31
HMGB3P6-201ENST00000444896 GRIA2P42262 883 aa6.86□□□□□ -1.31
HMGB3P6-201ENST00000444896 GP2P55259 537 aaKnown RBP6.86□□□□□ -1.31
HMGB3P6-201ENST00000444896 TEKQ02763 1124 aa6.86□□□□□ -1.31
HMGB3P6-201ENST00000444896 CYP4F3Q08477 520 aa6.86□□□□□ -1.31
HMGB3P6-201ENST00000444896 GRB10Q13322 594 aa6.86□□□□□ -1.31
HMGB3P6-201ENST00000444896 RTP2Q5QGT7 225 aa6.86□□□□□ -1.31
HMGB3P6-201ENST00000444896 GIMAP6Q6P9H5 292 aa6.86□□□□□ -1.31
HMGB3P6-201ENST00000444896 NOP9Q86U38 636 aaKnown RBP6.86□□□□□ -1.31
HMGB3P6-201ENST00000444896 KANSL2Q9H9L4 492 aa6.86□□□□□ -1.31
HMGB3P6-201ENST00000444896 LRP2BPQ9P2M1 347 aa6.86□□□□□ -1.31
HMGB3P6-201ENST00000444896 TCFL5Q9UL49 500 aa6.86□□□□□ -1.31
HMGB3P6-201ENST00000444896 NOP56O00567 594 aaKnown RBP6.85□□□□□ -1.31
HMGB3P6-201ENST00000444896 LTKP29376 864 aa6.85□□□□□ -1.31
HMGB3P6-201ENST00000444896 PCBP3P57721 371 aaKnown RBP6.85□□□□□ -1.31
HMGB3P6-201ENST00000444896 PPP2R2AP63151 447 aa6.85□□□□□ -1.31
HMGB3P6-201ENST00000444896 POU4F1Q01851 419 aa6.85□□□□□ -1.31
HMGB3P6-201ENST00000444896 EGR3Q06889 387 aa6.85□□□□□ -1.31
HMGB3P6-201ENST00000444896 SSRP1Q08945 709 aaKnown RBP6.85□□□□□ -1.31
HMGB3P6-201ENST00000444896 DPY19L1Q2PZI1 675 aa6.85□□□□□ -1.31
HMGB3P6-201ENST00000444896 GTF2IRD2BQ6EKJ0 949 aa6.85□□□□□ -1.31
HMGB3P6-201ENST00000444896 ZPBP2Q6X784 338 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms