RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 RAB30Q15771 203 aa17.9■□□□□ 0.46
MRPL40-202ENST00000443660 CCSAPQ6IQ19 270 aaPredicted RBP17.9■□□□□ 0.46
MRPL40-202ENST00000443660 ZNF365Q70YC5 407 aa17.9■□□□□ 0.46
MRPL40-202ENST00000443660 FTSJ3Q8IY81 847 aaKnown RBP17.9■□□□□ 0.46
MRPL40-202ENST00000443660 DDRGK1Q96HY6 314 aa17.9■□□□□ 0.46
MRPL40-202ENST00000443660 UHRF1Q96T88 793 aaPredicted RBP17.9■□□□□ 0.46
MRPL40-202ENST00000443660 MTIF3Q9H2K0 278 aaKnown RBP17.9■□□□□ 0.46
MRPL40-202ENST00000443660 ARMT1Q9H993 441 aa17.9■□□□□ 0.46
MRPL40-202ENST00000443660 ZNF214Q9UL59 606 aaPredicted RBP17.9■□□□□ 0.46
MRPL40-202ENST00000443660 SYNGAP1Q96PV0 1343 aa17.9■□□□□ 0.46
MRPL40-202ENST00000443660 MYO5AQ9Y4I1 1855 aaKnown RBP17.89■□□□□ 0.45
MRPL40-202ENST00000443660 GOLIM4O00461 696 aa17.89■□□□□ 0.45
MRPL40-202ENST00000443660 SNAI1O95863 264 aaPredicted RBP17.89■□□□□ 0.45
MRPL40-202ENST00000443660 HSP90AB4PQ58FF6 505 aa17.89■□□□□ 0.45
MRPL40-202ENST00000443660 RASIP1Q5U651 963 aa17.89■□□□□ 0.45
MRPL40-202ENST00000443660 ITPRIPQ8IWB1 547 aa17.89■□□□□ 0.45
MRPL40-202ENST00000443660 FAM122AQ96E09 287 aa17.89■□□□□ 0.45
MRPL40-202ENST00000443660 TEX13BQ9BXU2 312 aa17.89■□□□□ 0.45
MRPL40-202ENST00000443660 SLC28A3Q9HAS3 691 aa17.89■□□□□ 0.45
MRPL40-202ENST00000443660 RAPGEFL1Q9UHV5 662 aa17.89■□□□□ 0.45
MRPL40-202ENST00000443660 EXOC6BQ9Y2D4 811 aa17.89■□□□□ 0.45
MRPL40-202ENST00000443660 CDH23Q9H251 3354 aa17.88■□□□□ 0.45
MRPL40-202ENST00000443660 A0A0U1RQG5 324 aaPredicted RBP17.88■□□□□ 0.45
MRPL40-202ENST00000443660 ARVCFO00192 962 aa17.88■□□□□ 0.45
MRPL40-202ENST00000443660 ASGR1P07306 291 aa17.88■□□□□ 0.45
MRPL40-202ENST00000443660 ACRP10323 421 aa17.88■□□□□ 0.45
MRPL40-202ENST00000443660 CST5P28325 142 aaPredicted RBP17.88■□□□□ 0.45
MRPL40-202ENST00000443660 ACVR2BQ13705 512 aa17.88■□□□□ 0.45
MRPL40-202ENST00000443660 GNASQ5JWF2 1037 aa17.88■□□□□ 0.45
MRPL40-202ENST00000443660 FAM83BQ5T0W9 1011 aa17.88■□□□□ 0.45
MRPL40-202ENST00000443660 C12orf60Q5U649 245 aa17.88■□□□□ 0.45
MRPL40-202ENST00000443660 MAMDC4Q6UXC1 1216 aa17.88■□□□□ 0.45
MRPL40-202ENST00000443660 DNAJC2Q99543 621 aaKnown RBP17.88■□□□□ 0.45
MRPL40-202ENST00000443660 PPP1R12CQ9BZL4 782 aa17.88■□□□□ 0.45
MRPL40-202ENST00000443660 CTDP1Q9Y5B0 961 aaPredicted RBP17.88■□□□□ 0.45
MRPL40-202ENST00000443660 A0A0G2JMZ2 1700 aa17.88■□□□□ 0.45
MRPL40-202ENST00000443660 TCRBV5S4A2TA0A5A2 114 aa17.87■□□□□ 0.45
MRPL40-202ENST00000443660 PRKAB2O43741 272 aa17.87■□□□□ 0.45
MRPL40-202ENST00000443660 FGBP02675 491 aa17.87■□□□□ 0.45
MRPL40-202ENST00000443660 SLC4A3P48751 1232 aa17.87■□□□□ 0.45
MRPL40-202ENST00000443660 SNRNP48Q6IEG0 339 aaKnown RBP17.87■□□□□ 0.45
MRPL40-202ENST00000443660 ZNF467Q7Z7K2 595 aaPredicted RBP17.87■□□□□ 0.45
MRPL40-202ENST00000443660 REPS2Q8NFH8 660 aa17.87■□□□□ 0.45
MRPL40-202ENST00000443660 ABHD16BQ9H3Z7 469 aa17.87■□□□□ 0.45
MRPL40-202ENST00000443660 IL1RAPL2Q9NP60 686 aa17.87■□□□□ 0.45
MRPL40-202ENST00000443660 MYADML2A6NDP7 307 aa17.86■□□□□ 0.45
MRPL40-202ENST00000443660 USP17L12C9JPN9 530 aa17.86■□□□□ 0.45
MRPL40-202ENST00000443660 USP17L21D6R901 530 aa17.86■□□□□ 0.45
MRPL40-202ENST00000443660 PLA2G5P39877 138 aa17.86■□□□□ 0.45
MRPL40-202ENST00000443660 ADGRE1Q14246 886 aa17.86■□□□□ 0.45
MRPL40-202ENST00000443660 C16orf86Q6ZW13 317 aa17.86■□□□□ 0.45
MRPL40-202ENST00000443660 CLASRPQ8N2M8 674 aaKnown RBP17.86■□□□□ 0.45
MRPL40-202ENST00000443660 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.86■□□□□ 0.45
MRPL40-202ENST00000443660 HERVK_113Q902F9 699 aa17.86■□□□□ 0.45
MRPL40-202ENST00000443660 SLF1Q9BQI6 1058 aa17.86■□□□□ 0.45
MRPL40-202ENST00000443660 IL23AQ9NPF7 189 aa17.86■□□□□ 0.45
MRPL40-202ENST00000443660 CYP2D7A0A087X1C5 515 aa17.85■□□□□ 0.45
MRPL40-202ENST00000443660 ZBED4O75132 1171 aa17.85■□□□□ 0.45
MRPL40-202ENST00000443660 MBD4O95243 580 aa17.85■□□□□ 0.45
MRPL40-202ENST00000443660 IFIT2P09913 472 aaKnown RBP17.85■□□□□ 0.45
MRPL40-202ENST00000443660 GJA9P57773 515 aa17.85■□□□□ 0.45
MRPL40-202ENST00000443660 CCDC144BQ3MJ40 725 aa17.85■□□□□ 0.45
MRPL40-202ENST00000443660 CEP85Q6P2H3 762 aa17.85■□□□□ 0.45
MRPL40-202ENST00000443660 FAM126BQ8IXS8 530 aa17.85■□□□□ 0.45
MRPL40-202ENST00000443660 ANKRD35Q8N283 1001 aa17.85■□□□□ 0.45
MRPL40-202ENST00000443660 PRPF38AQ8NAV1 312 aaKnown RBP17.85■□□□□ 0.45
MRPL40-202ENST00000443660 RHPN1Q8TCX5 695 aa17.85■□□□□ 0.45
MRPL40-202ENST00000443660 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.85■□□□□ 0.45
MRPL40-202ENST00000443660 NKX2-4Q9H2Z4 354 aa17.85■□□□□ 0.45
MRPL40-202ENST00000443660 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.85■□□□□ 0.45
MRPL40-202ENST00000443660 SMCHD1A6NHR9 2005 aa17.84■□□□□ 0.45
MRPL40-202ENST00000443660 DNAJC25-GNG10A0A024R161 153 aa17.84■□□□□ 0.45
MRPL40-202ENST00000443660 CYP2C18P33260 490 aa17.84■□□□□ 0.45
MRPL40-202ENST00000443660 AAK1Q2M2I8 961 aa17.84■□□□□ 0.45
MRPL40-202ENST00000443660 CPXCR1Q8N123 301 aa17.84■□□□□ 0.45
MRPL40-202ENST00000443660 C1QTNF1Q9BXJ1 281 aa17.84■□□□□ 0.45
MRPL40-202ENST00000443660 UPF3AQ9H1J1 476 aaKnown RBP17.84■□□□□ 0.45
MRPL40-202ENST00000443660 RIPK3Q9Y572 518 aa17.84■□□□□ 0.45
MRPL40-202ENST00000443660 ADD2P35612 726 aa17.83■□□□□ 0.44
MRPL40-202ENST00000443660 IRX5P78411 483 aaPredicted RBP17.83■□□□□ 0.44
MRPL40-202ENST00000443660 NOL8Q76FK4 1167 aaKnown RBP17.83■□□□□ 0.44
MRPL40-202ENST00000443660 BCL11AQ9H165 835 aa17.83■□□□□ 0.44
MRPL40-202ENST00000443660 CXXC1Q9P0U4 656 aaPredicted RBP17.83■□□□□ 0.44
MRPL40-202ENST00000443660 FBXO40Q9UH90 709 aa17.83■□□□□ 0.44
MRPL40-202ENST00000443660 SLC4A4Q9Y6R1 1079 aa17.83■□□□□ 0.44
MRPL40-202ENST00000443660 F5H6K3 240 aa17.82■□□□□ 0.44
MRPL40-202ENST00000443660 SMIM22K7EJ46 135 aa17.82■□□□□ 0.44
MRPL40-202ENST00000443660 ATP2A1O14983 1001 aa17.82■□□□□ 0.44
MRPL40-202ENST00000443660 KLRC3Q07444 240 aa17.82■□□□□ 0.44
MRPL40-202ENST00000443660 OTOP2Q7RTS6 562 aa17.82■□□□□ 0.44
MRPL40-202ENST00000443660 NUP88Q99567 741 aaPredicted RBP17.82■□□□□ 0.44
MRPL40-202ENST00000443660 HIPK3Q9H422 1215 aa17.82■□□□□ 0.44
MRPL40-202ENST00000443660 PAG1Q9NWQ8 432 aa17.82■□□□□ 0.44
MRPL40-202ENST00000443660 NAV1Q8NEY1 1877 aa17.82■□□□□ 0.44
MRPL40-202ENST00000443660 CABYRO75952 493 aa17.81■□□□□ 0.44
MRPL40-202ENST00000443660 CD4P01730 458 aa17.81■□□□□ 0.44
MRPL40-202ENST00000443660 CTR9Q6PD62 1173 aa17.81■□□□□ 0.44
MRPL40-202ENST00000443660 ARMCX2Q7L311 632 aa17.81■□□□□ 0.44
MRPL40-202ENST00000443660 RPUSD2Q8IZ73 545 aaKnown RBP17.81■□□□□ 0.44
MRPL40-202ENST00000443660 MICALL1Q8N3F8 863 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms