RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 MYO5AQ9Y4I1 1855 aaKnown RBP18.8■□□□□ 0.6
PMS1-213ENST00000441310 PLCH1Q4KWH8 1693 aa18.8■□□□□ 0.6
PMS1-213ENST00000441310 RNF225M0QZC1 329 aaPredicted RBP18.79■□□□□ 0.6
PMS1-213ENST00000441310 GYG1P46976 350 aa18.79■□□□□ 0.6
PMS1-213ENST00000441310 C2orf54Q08AI8 447 aa18.79■□□□□ 0.6
PMS1-213ENST00000441310 PARP10Q53GL7 1025 aa18.79■□□□□ 0.6
PMS1-213ENST00000441310 APTXQ7Z2E3 356 aaKnown RBP18.79■□□□□ 0.6
PMS1-213ENST00000441310 B4E1Z4 1266 aa18.79■□□□□ 0.6
PMS1-213ENST00000441310 ZNF185O15231 689 aa18.79■□□□□ 0.6
PMS1-213ENST00000441310 PDHBP11177 359 aa18.79■□□□□ 0.6
PMS1-213ENST00000441310 CDR1P51861 262 aa18.79■□□□□ 0.6
PMS1-213ENST00000441310 GRIN1Q05586 938 aa18.79■□□□□ 0.6
PMS1-213ENST00000441310 MORC3Q14149 939 aa18.79■□□□□ 0.6
PMS1-213ENST00000441310 E2F5Q15329 346 aa18.79■□□□□ 0.6
PMS1-213ENST00000441310 TTF1Q15361 905 aaPredicted RBP18.79■□□□□ 0.6
PMS1-213ENST00000441310 BARGINQ6ZT62 677 aa18.79■□□□□ 0.6
PMS1-213ENST00000441310 NCOA7Q8NI08 942 aa18.79■□□□□ 0.6
PMS1-213ENST00000441310 RUFY1Q96T51 708 aa18.79■□□□□ 0.6
PMS1-213ENST00000441310 SENP2Q9HC62 589 aa18.79■□□□□ 0.6
PMS1-213ENST00000441310 UQCRFS1P1P0C7P4 283 aa18.79■□□□□ 0.6
PMS1-213ENST00000441310 PPARDQ03181 441 aa18.79■□□□□ 0.6
PMS1-213ENST00000441310 SF3B2Q13435 895 aaKnown RBP18.79■□□□□ 0.6
PMS1-213ENST00000441310 ADD3Q9UEY8 706 aaKnown RBP18.79■□□□□ 0.6
PMS1-213ENST00000441310 HPS5Q9UPZ3 1129 aa18.79■□□□□ 0.6
PMS1-213ENST00000441310 TARSL2A2RTX5 802 aaKnown RBP18.78■□□□□ 0.6
PMS1-213ENST00000441310 GOLGA8KD6RF30 607 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 PLCD1P51178 756 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 CTDSPL2Q05D32 466 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 FILIP1LQ4L180 1135 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 SCLT1Q96NL6 688 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 MYH8P13535 1937 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 LTBP4Q8N2S1 1624 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 SKAP2O75563 359 aaPredicted RBP18.78■□□□□ 0.6
PMS1-213ENST00000441310 ARID4AP29374 1257 aaPredicted RBP18.78■□□□□ 0.6
PMS1-213ENST00000441310 TTMPQ5BVD1 217 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 RRP12Q5JTH9 1297 aaKnown RBP18.78■□□□□ 0.6
PMS1-213ENST00000441310 KRT40Q6A162 431 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 CHP1Q99653 195 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 LRP2BPQ9P2M1 347 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 IFT88Q13099 833 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 TBC1D9BQ66K14 1250 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 MB21D2Q8IYB1 491 aaPredicted RBP18.78■□□□□ 0.6
PMS1-213ENST00000441310 CCDC13Q8IYE1 715 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 TBC1D22AQ8WUA7 517 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 MAP3K14Q99558 947 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 MYL10Q9BUA6 226 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 TRIM6Q9C030 488 aaPredicted RBP18.78■□□□□ 0.6
PMS1-213ENST00000441310 SLC40A1Q9NP59 571 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 ABHD10Q9NUJ1 306 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 FAM184BQ9ULE4 1060 aa18.78■□□□□ 0.6
PMS1-213ENST00000441310 ZMYM6O95789 1325 aa18.77■□□□□ 0.6
PMS1-213ENST00000441310 EZH2Q15910 746 aaKnown RBP18.77■□□□□ 0.6
PMS1-213ENST00000441310 CYP26C1Q6V0L0 522 aa18.77■□□□□ 0.6
PMS1-213ENST00000441310 CYB5R4Q7L1T6 521 aa18.77■□□□□ 0.6
PMS1-213ENST00000441310 DDX20Q9UHI6 824 aaKnown RBP18.77■□□□□ 0.6
PMS1-213ENST00000441310 ZNF652Q9Y2D9 606 aa18.77■□□□□ 0.6
PMS1-213ENST00000441310 AKAP11Q9UKA4 1901 aa18.77■□□□□ 0.6
PMS1-213ENST00000441310 PBX1P40424 430 aa18.77■□□□□ 0.59
PMS1-213ENST00000441310 MICALCLQ6ZW33 695 aa18.77■□□□□ 0.59
PMS1-213ENST00000441310 SMYD4Q8IYR2 804 aaPredicted RBP18.77■□□□□ 0.59
PMS1-213ENST00000441310 JAKMIP2Q96AA8 810 aa18.77■□□□□ 0.59
PMS1-213ENST00000441310 STRBPQ96SI9 672 aaKnown RBP18.77■□□□□ 0.59
PMS1-213ENST00000441310 MYH3P11055 1940 aa18.77■□□□□ 0.59
PMS1-213ENST00000441310 EP400Q96L91 3159 aa18.76■□□□□ 0.59
PMS1-213ENST00000441310 FAM237AA0A1B0GTK4 181 aa18.76■□□□□ 0.59
PMS1-213ENST00000441310 PDE2AO00408 941 aaPredicted RBP18.76■□□□□ 0.59
PMS1-213ENST00000441310 OPA1O60313 960 aa18.76■□□□□ 0.59
PMS1-213ENST00000441310 SARNPP82979 210 aaKnown RBP18.76■□□□□ 0.59
PMS1-213ENST00000441310 GUCY1A3Q02108 690 aa18.76■□□□□ 0.59
PMS1-213ENST00000441310 MAP3K12Q12852 859 aa18.76■□□□□ 0.59
PMS1-213ENST00000441310 NAA35Q5VZE5 725 aa18.76■□□□□ 0.59
PMS1-213ENST00000441310 AMIGO3Q86WK7 504 aa18.76■□□□□ 0.59
PMS1-213ENST00000441310 VCPKMTQ9H867 229 aa18.76■□□□□ 0.59
PMS1-213ENST00000441310 GNPATO15228 680 aa18.76■□□□□ 0.59
PMS1-213ENST00000441310 RPSAP08865 295 aaKnown RBP18.76■□□□□ 0.59
PMS1-213ENST00000441310 NAP1L1P55209 391 aaKnown RBP18.76■□□□□ 0.59
PMS1-213ENST00000441310 NAA25Q14CX7 972 aa18.76■□□□□ 0.59
PMS1-213ENST00000441310 UBE3CQ15386 1083 aa18.76■□□□□ 0.59
PMS1-213ENST00000441310 FMNL3Q8IVF7 1028 aa18.76■□□□□ 0.59
PMS1-213ENST00000441310 KRI1Q8N9T8 703 aaKnown RBP18.76■□□□□ 0.59
PMS1-213ENST00000441310 HDAC7Q8WUI4 952 aa18.76■□□□□ 0.59
PMS1-213ENST00000441310 JAG2Q9Y219 1238 aa18.76■□□□□ 0.59
PMS1-213ENST00000441310 CALRP27797 417 aaKnown RBP18.76■□□□□ 0.59
PMS1-213ENST00000441310 CASP1P29466 404 aa18.76■□□□□ 0.59
PMS1-213ENST00000441310 SMTNP53814 917 aa18.76■□□□□ 0.59
PMS1-213ENST00000441310 AENQ8WTP8 325 aaKnown RBP18.76■□□□□ 0.59
PMS1-213ENST00000441310 CELF1Q92879 486 aaKnown RBP18.76■□□□□ 0.59
PMS1-213ENST00000441310 PHKBQ93100 1093 aa18.76■□□□□ 0.59
PMS1-213ENST00000441310 SYNRGQ9UMZ2 1314 aa18.76■□□□□ 0.59
PMS1-213ENST00000441310 COL22A1Q8NFW1 1626 aaPredicted RBP18.75■□□□□ 0.59
PMS1-213ENST00000441310 TCRBV5S4A2TA0A5A2 114 aa18.75■□□□□ 0.59
PMS1-213ENST00000441310 KRT9P35527 623 aa18.75■□□□□ 0.59
PMS1-213ENST00000441310 MATR3P43243 847 aaKnown RBP eCLIP18.75■□□□□ 0.59
PMS1-213ENST00000441310 SEC24CP53992 1094 aa18.75■□□□□ 0.59
PMS1-213ENST00000441310 CKAP4Q07065 602 aaKnown RBP18.75■□□□□ 0.59
PMS1-213ENST00000441310 CCDC122Q5T0U0 273 aa18.75■□□□□ 0.59
PMS1-213ENST00000441310 WLSQ5T9L3 541 aa18.75■□□□□ 0.59
PMS1-213ENST00000441310 CCDC114Q96M63 670 aa18.75■□□□□ 0.59
PMS1-213ENST00000441310 ZKSCAN3Q9BRR0 538 aa18.75■□□□□ 0.59
PMS1-213ENST00000441310 VPS16Q9H269 839 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms