RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 POLR3EQ9NVU0 708 aa23.24■■□□□ 1.31
VRK2-207ENST00000440705 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.24■■□□□ 1.31
VRK2-207ENST00000440705 RCOR1Q9UKL0 485 aa23.24■■□□□ 1.31
VRK2-207ENST00000440705 NR5A1Q13285 461 aa23.23■■□□□ 1.31
VRK2-207ENST00000440705 NPY5RQ15761 445 aa23.23■■□□□ 1.31
VRK2-207ENST00000440705 FEZ1Q99689 392 aa23.23■■□□□ 1.31
VRK2-207ENST00000440705 PICK1Q9NRD5 415 aa23.23■■□□□ 1.31
VRK2-207ENST00000440705 DOCK1Q14185 1865 aa23.23■■□□□ 1.31
VRK2-207ENST00000440705 WDR90Q96KV7 1748 aa23.23■■□□□ 1.31
VRK2-207ENST00000440705 ZBTB5O15062 677 aa23.22■■□□□ 1.31
VRK2-207ENST00000440705 CEBPZQ03701 1054 aaKnown RBP23.22■■□□□ 1.31
VRK2-207ENST00000440705 BTNL9Q6UXG8 535 aa23.22■■□□□ 1.31
VRK2-207ENST00000440705 SPICE1Q8N0Z3 855 aa23.22■■□□□ 1.31
VRK2-207ENST00000440705 NUP88Q99567 741 aaPredicted RBP23.22■■□□□ 1.31
VRK2-207ENST00000440705 PCDHA4Q9UN74 947 aa23.22■■□□□ 1.31
VRK2-207ENST00000440705 USP17L10C9JJH3 530 aa23.22■■□□□ 1.31
VRK2-207ENST00000440705 TMEM232C9JQI7 657 aa23.22■■□□□ 1.31
VRK2-207ENST00000440705 YEATS4O95619 227 aa23.22■■□□□ 1.31
VRK2-207ENST00000440705 NAPAP54920 295 aa23.22■■□□□ 1.31
VRK2-207ENST00000440705 IKQ13123 557 aaPredicted RBP23.22■■□□□ 1.31
VRK2-207ENST00000440705 RILPL1Q5EBL4 403 aa23.22■■□□□ 1.31
VRK2-207ENST00000440705 BLIDQ8IZY5 108 aa23.22■■□□□ 1.31
VRK2-207ENST00000440705 DAGLBQ8NCG7 672 aa23.22■■□□□ 1.31
VRK2-207ENST00000440705 KIAA1683Q9H0B3 1180 aa23.22■■□□□ 1.31
VRK2-207ENST00000440705 SSC5DA1L4H1 1573 aa23.21■■□□□ 1.31
VRK2-207ENST00000440705 ADM5C9JUS6 153 aa23.21■■□□□ 1.31
VRK2-207ENST00000440705 GADD45BO75293 160 aaPredicted RBP23.21■■□□□ 1.31
VRK2-207ENST00000440705 GNA11P29992 359 aa23.21■■□□□ 1.31
VRK2-207ENST00000440705 NASPP49321 788 aaPredicted RBP23.21■■□□□ 1.31
VRK2-207ENST00000440705 ANO1Q5XXA6 986 aa23.21■■□□□ 1.31
VRK2-207ENST00000440705 TYW1BQ6NUM6 668 aa23.21■■□□□ 1.31
VRK2-207ENST00000440705 GPT2Q8TD30 523 aa23.21■■□□□ 1.31
VRK2-207ENST00000440705 GLIS2Q9BZE0 524 aaPredicted RBP23.21■■□□□ 1.31
VRK2-207ENST00000440705 ZMYND12Q9H0C1 365 aa23.21■■□□□ 1.31
VRK2-207ENST00000440705 AS3MTQ9HBK9 375 aa23.21■■□□□ 1.31
VRK2-207ENST00000440705 GOLGA6L4A6NEF3 574 aa23.2■■□□□ 1.3
VRK2-207ENST00000440705 POTECB2RU33 542 aa23.2■■□□□ 1.3
VRK2-207ENST00000440705 PPP1R12BO60237 982 aaPredicted RBP23.2■■□□□ 1.3
VRK2-207ENST00000440705 STAT2P52630 851 aa23.2■■□□□ 1.3
VRK2-207ENST00000440705 EAPPQ56P03 285 aaPredicted RBP23.2■■□□□ 1.3
VRK2-207ENST00000440705 KIAA1755Q5JYT7 1200 aa23.2■■□□□ 1.3
VRK2-207ENST00000440705 SYDE2Q5VT97 1194 aa23.2■■□□□ 1.3
VRK2-207ENST00000440705 CCDC84Q86UT8 332 aaPredicted RBP23.2■■□□□ 1.3
VRK2-207ENST00000440705 CHURC1Q8WUH1 139 aa23.2■■□□□ 1.3
VRK2-207ENST00000440705 LPAR1Q92633 364 aa23.2■■□□□ 1.3
VRK2-207ENST00000440705 TNFRSF25Q93038 417 aa23.2■■□□□ 1.3
VRK2-207ENST00000440705 ZKSCAN4Q969J2 545 aaPredicted RBP23.2■■□□□ 1.3
VRK2-207ENST00000440705 WDR18Q9BV38 432 aa23.2■■□□□ 1.3
VRK2-207ENST00000440705 FTOQ9C0B1 505 aaKnown RBP eCLIP23.2■■□□□ 1.3
VRK2-207ENST00000440705 C6orf50Q9HD87 102 aa23.2■■□□□ 1.3
VRK2-207ENST00000440705 CLIC4Q9Y696 253 aa23.2■■□□□ 1.3
VRK2-207ENST00000440705 ESYT2A0FGR8 921 aa23.19■■□□□ 1.3
VRK2-207ENST00000440705 PLA2G6O60733 806 aa23.19■■□□□ 1.3
VRK2-207ENST00000440705 PTPRAP18433 802 aa23.19■■□□□ 1.3
VRK2-207ENST00000440705 STK38Q15208 465 aa23.19■■□□□ 1.3
VRK2-207ENST00000440705 ZYXQ15942 572 aaKnown RBP23.19■■□□□ 1.3
VRK2-207ENST00000440705 NOL9Q5SY16 702 aaKnown RBP23.19■■□□□ 1.3
VRK2-207ENST00000440705 LINC00301Q8NCQ3 95 aa23.19■■□□□ 1.3
VRK2-207ENST00000440705 KCNG4Q8TDN1 519 aa23.19■■□□□ 1.3
VRK2-207ENST00000440705 USP2O75604 605 aaPredicted RBP23.19■■□□□ 1.3
VRK2-207ENST00000440705 NF2P35240 595 aa23.19■■□□□ 1.3
VRK2-207ENST00000440705 FAM83BQ5T0W9 1011 aa23.19■■□□□ 1.3
VRK2-207ENST00000440705 PPP1R18Q6NYC8 613 aa23.19■■□□□ 1.3
VRK2-207ENST00000440705 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.19■■□□□ 1.3
VRK2-207ENST00000440705 NOL7Q9UMY1 257 aaKnown RBP23.19■■□□□ 1.3
VRK2-207ENST00000440705 SMCO2A6NFE2 343 aa23.18■■□□□ 1.3
VRK2-207ENST00000440705 USP14P54578 494 aa23.18■■□□□ 1.3
VRK2-207ENST00000440705 FAM160B2Q86V87 743 aa23.18■■□□□ 1.3
VRK2-207ENST00000440705 BICD2Q8TD16 824 aa23.18■■□□□ 1.3
VRK2-207ENST00000440705 DCAF8L1A6NGE4 600 aa23.17■■□□□ 1.3
VRK2-207ENST00000440705 SF3A1Q15459 793 aaKnown RBP23.17■■□□□ 1.3
VRK2-207ENST00000440705 CDC37Q16543 378 aaPredicted RBP23.17■■□□□ 1.3
VRK2-207ENST00000440705 QRICH1Q2TAL8 776 aa23.17■■□□□ 1.3
VRK2-207ENST00000440705 FEM1BQ9UK73 627 aa23.17■■□□□ 1.3
VRK2-207ENST00000440705 FZD1Q9UP38 647 aa23.17■■□□□ 1.3
VRK2-207ENST00000440705 M0R2N6 131 aa23.16■■□□□ 1.3
VRK2-207ENST00000440705 WDR46O15213 610 aaKnown RBP23.16■■□□□ 1.3
VRK2-207ENST00000440705 TOB1P50616 345 aaPredicted RBP23.16■■□□□ 1.3
VRK2-207ENST00000440705 MAP3K9P80192 1104 aa23.16■■□□□ 1.3
VRK2-207ENST00000440705 SLC39A14Q15043 492 aa23.16■■□□□ 1.3
VRK2-207ENST00000440705 ZNF280CQ8ND82 737 aa23.16■■□□□ 1.3
VRK2-207ENST00000440705 COA7Q96BR5 231 aa23.16■■□□□ 1.3
VRK2-207ENST00000440705 SPTLC2O15270 562 aa23.16■■□□□ 1.3
VRK2-207ENST00000440705 IREB2P48200 963 aaKnown RBP23.16■■□□□ 1.3
VRK2-207ENST00000440705 TRAPPC10P48553 1259 aa23.16■■□□□ 1.3
VRK2-207ENST00000440705 SPP2Q13103 211 aa23.16■■□□□ 1.3
VRK2-207ENST00000440705 PRKG1Q13976 671 aa23.16■■□□□ 1.3
VRK2-207ENST00000440705 CDCA5Q96FF9 252 aa23.16■■□□□ 1.3
VRK2-207ENST00000440705 PRR12Q9ULL5 1215 aa23.16■■□□□ 1.3
VRK2-207ENST00000440705 PPP1R11O60927 126 aaPredicted RBP23.15■■□□□ 1.3
VRK2-207ENST00000440705 ME1P48163 572 aa23.15■■□□□ 1.3
VRK2-207ENST00000440705 TRAF1Q13077 416 aa23.15■■□□□ 1.3
VRK2-207ENST00000440705 MTMR2Q13614 643 aa23.15■■□□□ 1.3
VRK2-207ENST00000440705 PIK3AP1Q6ZUJ8 805 aa23.15■■□□□ 1.3
VRK2-207ENST00000440705 JMYQ8N9B5 988 aa23.15■■□□□ 1.3
VRK2-207ENST00000440705 PGBD1Q96JS3 809 aa23.15■■□□□ 1.3
VRK2-207ENST00000440705 AMNQ9BXJ7 453 aa23.15■■□□□ 1.3
VRK2-207ENST00000440705 PCDHA6Q9UN73 950 aa23.15■■□□□ 1.3
VRK2-207ENST00000440705 CEP131Q9UPN4 1083 aa23.15■■□□□ 1.3
VRK2-207ENST00000440705 PCDHA8Q9Y5H6 950 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms