RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 STAG2Q8N3U4 1231 aa17.25■□□□□ 0.35
CPNE1-215ENST00000437100 CHURC1Q8WUH1 139 aa17.25■□□□□ 0.35
CPNE1-215ENST00000437100 CHMP4CQ96CF2 233 aa17.25■□□□□ 0.35
CPNE1-215ENST00000437100 MYL10Q9BUA6 226 aa17.25■□□□□ 0.35
CPNE1-215ENST00000437100 SLC38A10Q9HBR0 1119 aa17.25■□□□□ 0.35
CPNE1-215ENST00000437100 BTBD7Q9P203 1132 aa17.25■□□□□ 0.35
CPNE1-215ENST00000437100 RABGAP1Q9Y3P9 1069 aa17.25■□□□□ 0.35
CPNE1-215ENST00000437100 KLF18A0A0U1RQI7 1052 aa17.24■□□□□ 0.35
CPNE1-215ENST00000437100 ATP2A1O14983 1001 aa17.24■□□□□ 0.35
CPNE1-215ENST00000437100 PEX10O60683 326 aa17.24■□□□□ 0.35
CPNE1-215ENST00000437100 GOLGA8HP0CJ92 632 aa17.24■□□□□ 0.35
CPNE1-215ENST00000437100 CALM1P0DP23 149 aa17.24■□□□□ 0.35
CPNE1-215ENST00000437100 CALM2P0DP24 149 aa17.24■□□□□ 0.35
CPNE1-215ENST00000437100 CALM3P0DP25 149 aa17.24■□□□□ 0.35
CPNE1-215ENST00000437100 APOBRQ0VD83 1088 aa17.24■□□□□ 0.35
CPNE1-215ENST00000437100 SLC35G1Q2M3R5 365 aa17.24■□□□□ 0.35
CPNE1-215ENST00000437100 SYDE2Q5VT97 1194 aa17.24■□□□□ 0.35
CPNE1-215ENST00000437100 ANKRD13CQ8N6S4 541 aa17.24■□□□□ 0.35
CPNE1-215ENST00000437100 KIFC2Q96AC6 838 aa17.24■□□□□ 0.35
CPNE1-215ENST00000437100 GPCPD1Q9NPB8 672 aa17.24■□□□□ 0.35
CPNE1-215ENST00000437100 PRR12Q9ULL5 1215 aa17.24■□□□□ 0.35
CPNE1-215ENST00000437100 HPS5Q9UPZ3 1129 aa17.24■□□□□ 0.35
CPNE1-215ENST00000437100 FDX1P10109 184 aa17.23■□□□□ 0.35
CPNE1-215ENST00000437100 SLC16A2P36021 539 aa17.23■□□□□ 0.35
CPNE1-215ENST00000437100 CTCFP49711 727 aaPredicted RBP17.23■□□□□ 0.35
CPNE1-215ENST00000437100 ERVK-9P63128 1117 aa17.23■□□□□ 0.35
CPNE1-215ENST00000437100 ERVK-24P63145 666 aa17.23■□□□□ 0.35
CPNE1-215ENST00000437100 TMEM132BQ14DG7 1078 aa17.23■□□□□ 0.35
CPNE1-215ENST00000437100 MICU3Q86XE3 530 aa17.23■□□□□ 0.35
CPNE1-215ENST00000437100 NUP133Q8WUM0 1156 aa17.23■□□□□ 0.35
CPNE1-215ENST00000437100 ZNF296Q8WUU4 475 aaPredicted RBP17.23■□□□□ 0.35
CPNE1-215ENST00000437100 RANBP17Q9H2T7 1088 aaKnown RBP17.23■□□□□ 0.35
CPNE1-215ENST00000437100 FAM217BQ9NTX9 383 aaPredicted RBP17.23■□□□□ 0.35
CPNE1-215ENST00000437100 ZNF214Q9UL59 606 aaPredicted RBP17.23■□□□□ 0.35
CPNE1-215ENST00000437100 ZNF536O15090 1300 aa17.22■□□□□ 0.35
CPNE1-215ENST00000437100 ZBTB43O43298 467 aa17.22■□□□□ 0.35
CPNE1-215ENST00000437100 RXRAP19793 462 aa17.22■□□□□ 0.35
CPNE1-215ENST00000437100 FGD1P98174 961 aa17.22■□□□□ 0.35
CPNE1-215ENST00000437100 CAP1Q01518 475 aa17.22■□□□□ 0.35
CPNE1-215ENST00000437100 Q3C1V9 767 aa17.22■□□□□ 0.35
CPNE1-215ENST00000437100 FANCBQ8NB91 859 aa17.22■□□□□ 0.35
CPNE1-215ENST00000437100 GPRC5AQ8NFJ5 357 aa17.22■□□□□ 0.35
CPNE1-215ENST00000437100 CTCFLQ8NI51 663 aaPredicted RBP17.22■□□□□ 0.35
CPNE1-215ENST00000437100 MTMR8Q96EF0 704 aa17.22■□□□□ 0.35
CPNE1-215ENST00000437100 CPVLQ9H3G5 476 aa17.22■□□□□ 0.35
CPNE1-215ENST00000437100 GOLGA8BA8MQT2 603 aa17.21■□□□□ 0.35
CPNE1-215ENST00000437100 KLRF2D3W0D1 207 aa17.21■□□□□ 0.35
CPNE1-215ENST00000437100 CYTH3O43739 400 aa17.21■□□□□ 0.35
CPNE1-215ENST00000437100 SMARCA1P28370 1054 aa17.21■□□□□ 0.35
CPNE1-215ENST00000437100 CTGFP29279 349 aa17.21■□□□□ 0.35
CPNE1-215ENST00000437100 PDIA3P30101 505 aaKnown RBP17.21■□□□□ 0.35
CPNE1-215ENST00000437100 KIF5BP33176 963 aa17.21■□□□□ 0.35
CPNE1-215ENST00000437100 NEK4P51957 841 aa17.21■□□□□ 0.35
CPNE1-215ENST00000437100 OAZ1P54368 228 aa17.21■□□□□ 0.35
CPNE1-215ENST00000437100 AK2P54819 239 aa17.21■□□□□ 0.35
CPNE1-215ENST00000437100 LACTBP83111 547 aaPredicted RBP17.21■□□□□ 0.35
CPNE1-215ENST00000437100 SP3Q02447 781 aa17.21■□□□□ 0.35
CPNE1-215ENST00000437100 RABEP1Q15276 862 aa17.21■□□□□ 0.35
CPNE1-215ENST00000437100 ANKRD1Q15327 319 aa17.21■□□□□ 0.35
CPNE1-215ENST00000437100 TMTC3Q6ZXV5 915 aa17.21■□□□□ 0.35
CPNE1-215ENST00000437100 NBPF11Q86T75 865 aa17.21■□□□□ 0.35
CPNE1-215ENST00000437100 RAB11FIP4Q86YS3 637 aa17.21■□□□□ 0.35
CPNE1-215ENST00000437100 PAGR1Q9BTK6 254 aa17.21■□□□□ 0.35
CPNE1-215ENST00000437100 UBA5Q9GZZ9 404 aa17.21■□□□□ 0.35
CPNE1-215ENST00000437100 SPATC1LQ9H0A9 340 aa17.21■□□□□ 0.35
CPNE1-215ENST00000437100 RIOX1Q9H6W3 641 aa17.21■□□□□ 0.35
CPNE1-215ENST00000437100 ISY1Q9ULR0 285 aaKnown RBP17.21■□□□□ 0.35
CPNE1-215ENST00000437100 FKTNO75072 461 aa17.2■□□□□ 0.34
CPNE1-215ENST00000437100 ZBED4O75132 1171 aa17.2■□□□□ 0.34
CPNE1-215ENST00000437100 IKQ13123 557 aaPredicted RBP17.2■□□□□ 0.34
CPNE1-215ENST00000437100 SYNE3Q6ZMZ3 975 aa17.2■□□□□ 0.34
CPNE1-215ENST00000437100 ADGRF4Q8IZF3 695 aa17.2■□□□□ 0.34
CPNE1-215ENST00000437100 IL27Q8NEV9 243 aa17.2■□□□□ 0.34
CPNE1-215ENST00000437100 ZNF274Q96GC6 653 aaPredicted RBP17.2■□□□□ 0.34
CPNE1-215ENST00000437100 LZTS2Q9BRK4 669 aa17.2■□□□□ 0.34
CPNE1-215ENST00000437100 SPZ1Q9BXG8 430 aa17.2■□□□□ 0.34
CPNE1-215ENST00000437100 RBM28Q9NW13 759 aaKnown RBP17.2■□□□□ 0.34
CPNE1-215ENST00000437100 GOLGA8AA7E2F4 631 aa17.19■□□□□ 0.34
CPNE1-215ENST00000437100 PLEKHA8P1O95397 391 aa17.19■□□□□ 0.34
CPNE1-215ENST00000437100 CDC27P30260 824 aa17.19■□□□□ 0.34
CPNE1-215ENST00000437100 GNAQP50148 359 aa17.19■□□□□ 0.34
CPNE1-215ENST00000437100 METAP2P50579 478 aaKnown RBP eCLIP17.19■□□□□ 0.34
CPNE1-215ENST00000437100 LBX1P52954 281 aa17.19■□□□□ 0.34
CPNE1-215ENST00000437100 FUT2Q10981 343 aa17.19■□□□□ 0.34
CPNE1-215ENST00000437100 PPP2R5BQ15173 497 aa17.19■□□□□ 0.34
CPNE1-215ENST00000437100 RTN1Q16799 776 aa17.19■□□□□ 0.34
CPNE1-215ENST00000437100 RIOX2Q8IUF8 465 aa17.19■□□□□ 0.34
CPNE1-215ENST00000437100 CCDC144CPQ8IYA2 1237 aa17.19■□□□□ 0.34
CPNE1-215ENST00000437100 SRBD1Q8N5C6 995 aaKnown RBP17.19■□□□□ 0.34
CPNE1-215ENST00000437100 SHCBP1Q8NEM2 672 aa17.19■□□□□ 0.34
CPNE1-215ENST00000437100 MOV10L1Q9BXT6 1211 aaKnown RBP17.19■□□□□ 0.34
CPNE1-215ENST00000437100 TEX13BQ9BXU2 312 aa17.19■□□□□ 0.34
CPNE1-215ENST00000437100 PORCNQ9H237 461 aa17.19■□□□□ 0.34
CPNE1-215ENST00000437100 JMJD4Q9H9V9 463 aa17.19■□□□□ 0.34
CPNE1-215ENST00000437100 TPCN1Q9ULQ1 816 aa17.19■□□□□ 0.34
CPNE1-215ENST00000437100 ICAM1P05362 532 aa17.18■□□□□ 0.34
CPNE1-215ENST00000437100 SNAP25P60880 206 aa17.18■□□□□ 0.34
CPNE1-215ENST00000437100 CDC37Q16543 378 aaPredicted RBP17.18■□□□□ 0.34
CPNE1-215ENST00000437100 SAMD1Q6SPF0 538 aaPredicted RBP17.18■□□□□ 0.34
CPNE1-215ENST00000437100 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.18■□□□□ 0.343e-8■□□□□ 9.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms