RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 PRPF38AQ8NAV1 312 aaKnown RBP7.38□□□□□ -1.23
PNKDP1-201ENST00000435914 GMCL1P1Q8NEA9 526 aa7.38□□□□□ -1.23
PNKDP1-201ENST00000435914 GPATCH3Q96I76 525 aa7.38□□□□□ -1.23
PNKDP1-201ENST00000435914 MMP19Q99542 508 aa7.38□□□□□ -1.23
PNKDP1-201ENST00000435914 TEX13BQ9BXU2 312 aa7.38□□□□□ -1.23
PNKDP1-201ENST00000435914 MKNK2Q9HBH9 465 aa7.38□□□□□ -1.23
PNKDP1-201ENST00000435914 SLC38A10Q9HBR0 1119 aa7.38□□□□□ -1.23
PNKDP1-201ENST00000435914 PDLIM7Q9NR12 457 aa7.38□□□□□ -1.23
PNKDP1-201ENST00000435914 MTMR10Q9NXD2 777 aa7.38□□□□□ -1.23
PNKDP1-201ENST00000435914 PHF24Q9UPV7 400 aa7.38□□□□□ -1.23
PNKDP1-201ENST00000435914 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.38□□□□□ -1.23
PNKDP1-201ENST00000435914 PRUNE2Q8WUY3 3088 aa7.38□□□□□ -1.23
PNKDP1-201ENST00000435914 LCTP09848 1927 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 ZNF536O15090 1300 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 SYNGAP1Q96PV0 1343 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 TRIM43BA6NCK2 446 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 KBTBD13C9JR72 458 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 ADCY6O43306 1168 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 TTLL1O95922 423 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 FGRP09769 529 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 MX1P20591 662 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 ITGB8P26012 769 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 TDO2P48775 406 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 KCTD2Q14681 263 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 TRIM60Q495X7 471 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 SNRNP48Q6IEG0 339 aaKnown RBP7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 SAMD1Q6SPF0 538 aaPredicted RBP7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 SH3RF1Q7Z6J0 888 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 ZNF467Q7Z7K2 595 aaPredicted RBP7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 MSL3Q8N5Y2 521 aaKnown RBP7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 DEFB123Q8N688 67 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 KLHDC9Q8NEP7 349 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 TRIM43Q96BQ3 446 aaPredicted RBP7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 LENG1Q96BZ8 264 aaPredicted RBP7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 KATNBL1Q9H079 304 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 XPNPEP3Q9NQH7 507 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 IL17RBQ9NRM6 502 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 CLIP2Q9UDT6 1046 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 LRRC37A2A6NM11 1700 aa7.37□□□□□ -1.23
PNKDP1-201ENST00000435914 CUL9Q8IWT3 2517 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 ERC2O15083 957 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 CTAGE5O15320 804 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 PGK1P00558 417 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 RARBP10826 455 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 AKR1A1P14550 325 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 OAZ1P54368 228 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 RRP1P56182 461 aaKnown RBP7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 NKX3-2P78367 333 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 IRX5P78411 483 aaPredicted RBP7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 TFAP4Q01664 338 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 TLE2Q04725 743 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 PPARAQ07869 468 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 C9orf50Q5SZB4 431 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 VPS53Q5VIR6 699 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 FAM109BQ6ICB4 259 aaPredicted RBP7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 CCDC129Q6ZRS4 1044 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 ZNF444Q8N0Y2 327 aaPredicted RBP7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 LRRC47Q8N1G4 583 aaKnown RBP7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 FERMT2Q96AC1 680 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 GMCL1Q96IK5 515 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 RAVER2Q9HCJ3 691 aaKnown RBP7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 ANAPC4Q9UJX5 808 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 FEM1BQ9UK73 627 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 ATP11BQ9Y2G3 1177 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 STXBP5LQ9Y2K9 1186 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 VCANP13611 3396 aa7.36□□□□□ -1.23
PNKDP1-201ENST00000435914 CHD9Q3L8U1 2897 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 ASTN1O14525 1302 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 SYNRGQ9UMZ2 1314 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 A0A1W2PQ45 241 aaPredicted RBP7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 A0A1W2PQY0 241 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 MYADML2A6NDP7 307 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 KIAA0355O15063 1070 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 RAD21O60216 631 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 PLA2G6O60733 806 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 APPP05067 770 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 BMP3P12645 472 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 CST5P28325 142 aaPredicted RBP7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 PDE1AP54750 535 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 EPHB4P54760 987 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 PDE4BQ07343 736 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 HDAC1Q13547 482 aaPredicted RBP7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 SHHQ15465 462 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 ALX1Q15699 326 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 LRRFIP1Q32MZ4 808 aaKnown RBP7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 SLFN13Q68D06 897 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 RASGRP2Q7LDG7 609 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 ANKRD33Q7Z3H0 272 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 CPXCR1Q8N123 301 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 FAM133AQ8N9E0 248 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 CHST13Q8NET6 341 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 BADQ92934 168 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 KIFC2Q96AC6 838 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 GUCD1Q96NT3 240 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 LBHD1Q9BQE6 289 aaPredicted RBP7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 TSEN34Q9BSV6 310 aaKnown RBP7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 FSD1Q9BTV5 496 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 NACAP1Q9BZK3 213 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 NAPBQ9H115 298 aa7.35□□□□□ -1.23
PNKDP1-201ENST00000435914 UPF3AQ9H1J1 476 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms