RNA–Protein interactions for RNA: ENST00000435795.5

TSSC4-204, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-204ENST00000435795 BTNL9Q6UXG8 535 aa18.19■□□□□ 0.5
TSSC4-204ENST00000435795 P2RX7Q99572 595 aaKnown RBP18.19■□□□□ 0.5
TSSC4-204ENST00000435795 SH2B1Q9NRF2 756 aaPredicted RBP18.19■□□□□ 0.5
TSSC4-204ENST00000435795 FAM217BQ9NTX9 383 aaPredicted RBP18.19■□□□□ 0.5
TSSC4-204ENST00000435795 PPP1R9AQ9ULJ8 1098 aa18.19■□□□□ 0.5
TSSC4-204ENST00000435795 PHIPQ8WWQ0 1821 aa18.19■□□□□ 0.5
TSSC4-204ENST00000435795 DHX16O60231 1041 aaKnown RBP18.18■□□□□ 0.5
TSSC4-204ENST00000435795 PLEKHA8P1O95397 391 aa18.18■□□□□ 0.5
TSSC4-204ENST00000435795 LARGE1O95461 756 aa18.18■□□□□ 0.5
TSSC4-204ENST00000435795 ALDH1A1P00352 501 aa18.18■□□□□ 0.5
TSSC4-204ENST00000435795 CDC27P30260 824 aa18.18■□□□□ 0.5
TSSC4-204ENST00000435795 ADD1P35611 737 aaKnown RBP18.18■□□□□ 0.5
TSSC4-204ENST00000435795 CPLX2Q6PUV4 134 aaKnown RBP18.18■□□□□ 0.5
TSSC4-204ENST00000435795 TMTC3Q6ZXV5 915 aa18.18■□□□□ 0.5
TSSC4-204ENST00000435795 NECAB1Q8N987 351 aa18.18■□□□□ 0.5
TSSC4-204ENST00000435795 PRPF38AQ8NAV1 312 aaKnown RBP18.18■□□□□ 0.5
TSSC4-204ENST00000435795 SNX21Q969T3 373 aa18.18■□□□□ 0.5
TSSC4-204ENST00000435795 PARK7Q99497 189 aaKnown RBP18.18■□□□□ 0.5
TSSC4-204ENST00000435795 NCOA5Q9HCD5 579 aaKnown RBP18.18■□□□□ 0.5
TSSC4-204ENST00000435795 VAT1LQ9HCJ6 419 aa18.18■□□□□ 0.5
TSSC4-204ENST00000435795 CPLX1O14810 134 aa18.17■□□□□ 0.5
TSSC4-204ENST00000435795 CYP2C8P10632 490 aa18.17■□□□□ 0.5
TSSC4-204ENST00000435795 SCRN1Q12765 414 aa18.17■□□□□ 0.5
TSSC4-204ENST00000435795 TAF1CQ15572 869 aaPredicted RBP18.17■□□□□ 0.5
TSSC4-204ENST00000435795 SRBD1Q8N5C6 995 aaKnown RBP18.17■□□□□ 0.5
TSSC4-204ENST00000435795 CPVLQ9H3G5 476 aa18.17■□□□□ 0.5
TSSC4-204ENST00000435795 PRR12Q9ULL5 1215 aa18.17■□□□□ 0.5
TSSC4-204ENST00000435795 CTDP1Q9Y5B0 961 aaPredicted RBP18.17■□□□□ 0.5
TSSC4-204ENST00000435795 MYPNQ86TC9 1320 aa18.17■□□□□ 0.5
TSSC4-204ENST00000435795 NID2Q14112 1375 aa18.17■□□□□ 0.5
TSSC4-204ENST00000435795 ZBED4O75132 1171 aa18.16■□□□□ 0.5
TSSC4-204ENST00000435795 SMARCA1P28370 1054 aa18.16■□□□□ 0.5
TSSC4-204ENST00000435795 HERVK_113P62684 666 aa18.16■□□□□ 0.5
TSSC4-204ENST00000435795 HSCBQ8IWL3 235 aa18.16■□□□□ 0.5
TSSC4-204ENST00000435795 ADGRF4Q8IZF3 695 aa18.16■□□□□ 0.5
TSSC4-204ENST00000435795 CMTR1Q8N1G2 835 aaKnown RBP18.16■□□□□ 0.5
TSSC4-204ENST00000435795 CCDC82Q8N4S0 544 aa18.16■□□□□ 0.5
TSSC4-204ENST00000435795 SMCR8Q8TEV9 937 aaPredicted RBP18.16■□□□□ 0.5
TSSC4-204ENST00000435795 GTF3C6Q969F1 213 aa18.16■□□□□ 0.5
TSSC4-204ENST00000435795 ATG4CQ96DT6 458 aa18.16■□□□□ 0.5
TSSC4-204ENST00000435795 TMX3Q96JJ7 454 aa18.16■□□□□ 0.5
TSSC4-204ENST00000435795 ZFYVE28Q9HCC9 887 aa18.16■□□□□ 0.5
TSSC4-204ENST00000435795 SPDYE16A6NNV3 312 aaPredicted RBP18.15■□□□□ 0.5
TSSC4-204ENST00000435795 FDX1P10109 184 aa18.15■□□□□ 0.5
TSSC4-204ENST00000435795 NBPF11Q86T75 865 aa18.15■□□□□ 0.5
TSSC4-204ENST00000435795 CCDC83Q8IWF9 413 aa18.15■□□□□ 0.5
TSSC4-204ENST00000435795 DNAJC5GQ8N7S2 189 aa18.15■□□□□ 0.5
TSSC4-204ENST00000435795 GTF3C2Q8WUA4 911 aaPredicted RBP18.15■□□□□ 0.5
TSSC4-204ENST00000435795 RIOX1Q9H6W3 641 aa18.15■□□□□ 0.5
TSSC4-204ENST00000435795 MYH4Q9Y623 1939 aa18.14■□□□□ 0.49
TSSC4-204ENST00000435795 VWA5AO00534 786 aa18.14■□□□□ 0.49
TSSC4-204ENST00000435795 CA12O43570 354 aa18.14■□□□□ 0.49
TSSC4-204ENST00000435795 GCLCP48506 637 aaPredicted RBP18.14■□□□□ 0.49
TSSC4-204ENST00000435795 SNAP25P60880 206 aa18.14■□□□□ 0.49
TSSC4-204ENST00000435795 SLC35G1Q2M3R5 365 aa18.14■□□□□ 0.49
TSSC4-204ENST00000435795 PIBF1Q8WXW3 757 aa18.14■□□□□ 0.49
TSSC4-204ENST00000435795 SPZ1Q9BXG8 430 aa18.14■□□□□ 0.49
TSSC4-204ENST00000435795 JMJD4Q9H9V9 463 aa18.14■□□□□ 0.49
TSSC4-204ENST00000435795 ADAMTS5Q9UNA0 930 aa18.14■□□□□ 0.49
TSSC4-204ENST00000435795 K7ELQ4 463 aaPredicted RBP18.13■□□□□ 0.49
TSSC4-204ENST00000435795 CYTH3O43739 400 aa18.13■□□□□ 0.49
TSSC4-204ENST00000435795 CDKL5O76039 1030 aa18.13■□□□□ 0.49
TSSC4-204ENST00000435795 IFNAR1P17181 557 aa18.13■□□□□ 0.49
TSSC4-204ENST00000435795 AKAP17AQ02040 695 aaKnown RBP18.13■□□□□ 0.49
TSSC4-204ENST00000435795 MAP2K1Q02750 393 aaPredicted RBP18.13■□□□□ 0.49
TSSC4-204ENST00000435795 CCDC174Q6PII3 467 aa18.13■□□□□ 0.49
TSSC4-204ENST00000435795 LBX2Q6XYB7 198 aa18.13■□□□□ 0.49
TSSC4-204ENST00000435795 MB21D1Q8N884 522 aa18.13■□□□□ 0.49
TSSC4-204ENST00000435795 RRP36Q96EU6 259 aaKnown RBP18.13■□□□□ 0.49
TSSC4-204ENST00000435795 PAGR1Q9BTK6 254 aa18.13■□□□□ 0.49
TSSC4-204ENST00000435795 RANBP17Q9H2T7 1088 aaKnown RBP18.13■□□□□ 0.49
TSSC4-204ENST00000435795 SLC38A10Q9HBR0 1119 aa18.13■□□□□ 0.49
TSSC4-204ENST00000435795 RNF186Q9NXI6 227 aa18.13■□□□□ 0.49
TSSC4-204ENST00000435795 SSRP1Q08945 709 aaKnown RBP18.12■□□□□ 0.49
TSSC4-204ENST00000435795 FUT2Q10981 343 aa18.12■□□□□ 0.49
TSSC4-204ENST00000435795 ST3GAL1Q11201 340 aa18.12■□□□□ 0.49
TSSC4-204ENST00000435795 CRHR2Q13324 411 aa18.12■□□□□ 0.49
TSSC4-204ENST00000435795 NTRK3Q16288 839 aa18.12■□□□□ 0.49
TSSC4-204ENST00000435795 CDC37Q16543 378 aaPredicted RBP18.12■□□□□ 0.49
TSSC4-204ENST00000435795 HOMER1Q86YM7 354 aa18.12■□□□□ 0.49
TSSC4-204ENST00000435795 CPXCR1Q8N123 301 aa18.12■□□□□ 0.49
TSSC4-204ENST00000435795 PHKBQ93100 1093 aa18.12■□□□□ 0.49
TSSC4-204ENST00000435795 PIGSQ96S52 555 aa18.12■□□□□ 0.49
TSSC4-204ENST00000435795 SLC26A6Q9BXS9 759 aa18.12■□□□□ 0.49
TSSC4-204ENST00000435795 TSHZ2Q9NRE2 1034 aa18.12■□□□□ 0.49
TSSC4-204ENST00000435795 RBPJLQ9UBG7 517 aa18.12■□□□□ 0.49
TSSC4-204ENST00000435795 RABGAP1Q9Y3P9 1069 aa18.12■□□□□ 0.49
TSSC4-204ENST00000435795 V9GY48 417 aaPredicted RBP18.12■□□□□ 0.49
TSSC4-204ENST00000435795 TLR2O60603 784 aa18.11■□□□□ 0.49
TSSC4-204ENST00000435795 PPFIA3O75145 1194 aa18.11■□□□□ 0.49
TSSC4-204ENST00000435795 TRPA1O75762 1119 aa18.11■□□□□ 0.49
TSSC4-204ENST00000435795 PLS1Q14651 629 aa18.11■□□□□ 0.49
TSSC4-204ENST00000435795 QRICH1Q2TAL8 776 aa18.11■□□□□ 0.49
TSSC4-204ENST00000435795 TRIM22Q8IYM9 498 aa18.11■□□□□ 0.49
TSSC4-204ENST00000435795 MTMR8Q96EF0 704 aa18.11■□□□□ 0.49
TSSC4-204ENST00000435795 BEGAINQ9BUH8 593 aa18.11■□□□□ 0.49
TSSC4-204ENST00000435795 RAVER2Q9HCJ3 691 aaKnown RBP18.11■□□□□ 0.49
TSSC4-204ENST00000435795 SEC63Q9UGP8 760 aaKnown RBP18.11■□□□□ 0.49
TSSC4-204ENST00000435795 CPA4Q9UI42 421 aa18.11■□□□□ 0.49
TSSC4-204ENST00000435795 CNTNAP5Q8WYK1 1306 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms